RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 TTTY13Q9BZ97 58 aa11.19□□□□□ -0.62
TCF3-219ENST00000610756 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
TCF3-219ENST00000610756 AKR1D1P51857 326 aa11.18□□□□□ -0.62
TCF3-219ENST00000610756 Q6ZRX8 168 aa11.18□□□□□ -0.62
TCF3-219ENST00000610756 TRAV23DV6A0A075B6W5 121 aa11.17□□□□□ -0.62
TCF3-219ENST00000610756 CBY1Q9Y3M2 126 aa11.17□□□□□ -0.62
TCF3-219ENST00000610756 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
TCF3-219ENST00000610756 Q9BRP9 147 aa11.16□□□□□ -0.62
TCF3-219ENST00000610756 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
TCF3-219ENST00000610756 ERC2-IT1O76042 136 aa11.15□□□□□ -0.62
TCF3-219ENST00000610756 JOSD1Q15040 202 aaPredicted RBP11.15□□□□□ -0.62
TCF3-219ENST00000610756 SPAG11AQ6PDA7 123 aa11.15□□□□□ -0.62
TCF3-219ENST00000610756 PPDPFQ9H3Y8 114 aa11.14□□□□□ -0.63
TCF3-219ENST00000610756 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
TCF3-219ENST00000610756 GAGE2AQ6NT46 116 aa11.12□□□□□ -0.63
TCF3-219ENST00000610756 LINC00518Q8N0U6 118 aa11.12□□□□□ -0.63
TCF3-219ENST00000610756 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
TCF3-219ENST00000610756 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
TCF3-219ENST00000610756 SCGB1D4Q6XE38 83 aa11.11□□□□□ -0.63
TCF3-219ENST00000610756 HIST3H2BBQ8N257 126 aa11.11□□□□□ -0.63
TCF3-219ENST00000610756 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
TCF3-219ENST00000610756 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
TCF3-219ENST00000610756 OR13C6PQ8NH95 151 aa11.1□□□□□ -0.63
TCF3-219ENST00000610756 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
TCF3-219ENST00000610756 HIST1H2BLQ99880 126 aa11.09□□□□□ -0.63
TCF3-219ENST00000610756 C5orf52A6NGY3 159 aa11.09□□□□□ -0.63
TCF3-219ENST00000610756 S100A2P29034 98 aa11.09□□□□□ -0.63
TCF3-219ENST00000610756 Q6ZVH6 145 aa11.09□□□□□ -0.63
TCF3-219ENST00000610756 COPS9Q8WXC6 57 aa11.09□□□□□ -0.63
TCF3-219ENST00000610756 RETNLBQ9BQ08 111 aa11.09□□□□□ -0.63
TCF3-219ENST00000610756 IFITM1P13164 125 aa11.08□□□□□ -0.64
TCF3-219ENST00000610756 PCP2Q8IVA1 136 aa11.08□□□□□ -0.64
TCF3-219ENST00000610756 Q8NBF4 154 aa11.08□□□□□ -0.64
TCF3-219ENST00000610756 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
TCF3-219ENST00000610756 SPINK1P00995 79 aa11.05□□□□□ -0.64
TCF3-219ENST00000610756 S100A6P06703 90 aa11.05□□□□□ -0.64
TCF3-219ENST00000610756 IGLV9-49A0A0B4J1Y8 123 aa11.03□□□□□ -0.64
TCF3-219ENST00000610756 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
TCF3-219ENST00000610756 IGLV7-46A0A075B6I9 117 aa11.02□□□□□ -0.65
TCF3-219ENST00000610756 MOBPQ13875 183 aa11.02□□□□□ -0.65
TCF3-219ENST00000610756 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
TCF3-219ENST00000610756 ST20-AS1Q8NBB2 130 aa11.02□□□□□ -0.65
TCF3-219ENST00000610756 ELOF1P60002 83 aaKnown RBP11□□□□□ -0.65
TCF3-219ENST00000610756 TPRXLQ17RH7 258 aa11□□□□□ -0.65
TCF3-219ENST00000610756 C6orf99Q4VX62 202 aa11□□□□□ -0.65
TCF3-219ENST00000610756 TRBV7-6A0A0J9YX20 115 aa10.99□□□□□ -0.65
TCF3-219ENST00000610756 COX7BP24311 80 aa10.99□□□□□ -0.65
TCF3-219ENST00000610756 MUC2Q02817 5179 aa10.99□□□□□ -0.65
TCF3-219ENST00000610756 HSBP1L1C9JCN9 74 aa10.98□□□□□ -0.65
TCF3-219ENST00000610756 SPRR1BP22528 89 aa10.97□□□□□ -0.65
TCF3-219ENST00000610756 RPS29P62273 56 aaKnown RBP10.97□□□□□ -0.65
TCF3-219ENST00000610756 FP248Q71RG6 208 aaPredicted RBP10.97□□□□□ -0.65
TCF3-219ENST00000610756 A6NDN8 102 aa10.96□□□□□ -0.65
TCF3-219ENST00000610756 TRAV13-2A0A0B4J235 113 aa10.94□□□□□ -0.66
TCF3-219ENST00000610756 SLC25A34Q6PIV7 304 aa10.94□□□□□ -0.66
TCF3-219ENST00000610756 CDIP1Q9H305 208 aa10.93□□□□□ -0.66
TCF3-219ENST00000610756 A0A1B0GWB2 263 aa10.92□□□□□ -0.66
TCF3-219ENST00000610756 C9orf153Q5TBE3 101 aa10.92□□□□□ -0.66
TCF3-219ENST00000610756 SCGB1D1O95968 90 aa10.91□□□□□ -0.66
TCF3-219ENST00000610756 Q8N377 158 aa10.9□□□□□ -0.66
TCF3-219ENST00000610756 A4D1N5 150 aa10.89□□□□□ -0.67
TCF3-219ENST00000610756 TAL2Q16559 108 aa10.89□□□□□ -0.67
TCF3-219ENST00000610756 LAMTOR3Q9UHA4 124 aa10.89□□□□□ -0.67
TCF3-219ENST00000610756 SLC25A20O43772 301 aa10.88□□□□□ -0.67
TCF3-219ENST00000610756 SMIM11BQ8TCY0 68 aa10.87□□□□□ -0.67
TCF3-219ENST00000610756 TEX49A0A1B0GTD5 131 aa10.86□□□□□ -0.67
TCF3-219ENST00000610756 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
TCF3-219ENST00000610756 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
TCF3-219ENST00000610756 IGLV5-48A0A075B6I7 105 aa10.83□□□□□ -0.68
TCF3-219ENST00000610756 COX8AP10176 69 aa10.83□□□□□ -0.68
TCF3-219ENST00000610756 NHP2Q9NX24 153 aaKnown RBP10.83□□□□□ -0.68
TCF3-219ENST00000610756 DLEU1O43261 78 aa10.82□□□□□ -0.68
TCF3-219ENST00000610756 LINC01547P58512 204 aaPredicted RBP10.82□□□□□ -0.68
TCF3-219ENST00000610756 VAMP3Q15836 100 aa10.82□□□□□ -0.68
TCF3-219ENST00000610756 SMIM29Q86T20 159 aa10.82□□□□□ -0.68
TCF3-219ENST00000610756 MUC17Q685J3 4493 aa10.81□□□□□ -0.68
TCF3-219ENST00000610756 Q1RN00 199 aa10.81□□□□□ -0.68
TCF3-219ENST00000610756 HIST1H4GQ99525 98 aa10.8□□□□□ -0.68
TCF3-219ENST00000610756 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
TCF3-219ENST00000610756 CD164Q04900 197 aa10.78□□□□□ -0.68
TCF3-219ENST00000610756 HRCT1Q6UXD1 115 aa10.76□□□□□ -0.69
TCF3-219ENST00000610756 LINC00575Q6W349 94 aa10.76□□□□□ -0.69
TCF3-219ENST00000610756 LIMD2Q9BT23 127 aa10.76□□□□□ -0.69
TCF3-219ENST00000610756 A0A0U1RQV1 116 aa10.75□□□□□ -0.69
TCF3-219ENST00000610756 C14orf144Q96I85 54 aa10.75□□□□□ -0.69
TCF3-219ENST00000610756 PAM16Q9Y3D7 125 aa10.73□□□□□ -0.69
TCF3-219ENST00000610756 hADV29S1A0JD25 119 aa10.72□□□□□ -0.69
TCF3-219ENST00000610756 SPATA45Q537H7 98 aa10.72□□□□□ -0.69
TCF3-219ENST00000610756 HIGD1BQ9P298 99 aa10.72□□□□□ -0.69
TCF3-219ENST00000610756 H7C2G1 150 aa10.71□□□□□ -0.69
TCF3-219ENST00000610756 C12orf57Q99622 126 aa10.71□□□□□ -0.69
TCF3-219ENST00000610756 VAMP8Q9BV40 100 aa10.7□□□□□ -0.7
TCF3-219ENST00000610756 ASB16-AS1Q495Z4 193 aa10.69□□□□□ -0.7
TCF3-219ENST00000610756 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
TCF3-219ENST00000610756 Q5XG85 94 aa10.69□□□□□ -0.7
TCF3-219ENST00000610756 CFC1BP0CG36 223 aa10.68□□□□□ -0.7
TCF3-219ENST00000610756 CFC1P0CG37 223 aa10.68□□□□□ -0.7
TCF3-219ENST00000610756 Q6ZQY7 126 aa10.67□□□□□ -0.7
TCF3-219ENST00000610756 C2orf91Q6ZV80 131 aa10.65□□□□□ -0.7
TCF3-219ENST00000610756 A0A0G2JQZ4 141 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms