RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
USP6NL-205ENST00000609104 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
USP6NL-205ENST00000609104 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.03
USP6NL-205ENST00000609104 A0A1B0GVX0 72 aa8.65□□□□□ -1.03
USP6NL-205ENST00000609104 PCNTO95613 3336 aa8.64□□□□□ -1.03
USP6NL-205ENST00000609104 ZNF462Q96JM2 2506 aa8.64□□□□□ -1.03
USP6NL-205ENST00000609104 KLKP1Q107X0 134 aa8.63□□□□□ -1.03
USP6NL-205ENST00000609104 J3QL48 77 aa8.63□□□□□ -1.03
USP6NL-205ENST00000609104 PIEZO1Q92508 2521 aa8.63□□□□□ -1.03
USP6NL-205ENST00000609104 USP9YO00507 2555 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-205ENST00000609104 KTN1-AS1Q86SY8 53 aa8.61□□□□□ -1.03
USP6NL-205ENST00000609104 H7BZZ5 65 aa8.61□□□□□ -1.03
USP6NL-205ENST00000609104 CSNK1G2-AS1Q8NCQ2 148 aa8.61□□□□□ -1.03
USP6NL-205ENST00000609104 LINC00304Q8N9R0 145 aa8.6□□□□□ -1.03
USP6NL-205ENST00000609104 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
USP6NL-205ENST00000609104 ANAPC11Q9NYG5 84 aa8.6□□□□□ -1.03
USP6NL-205ENST00000609104 CD164Q04900 197 aa8.6□□□□□ -1.03
USP6NL-205ENST00000609104 A0A0D9SG42 100 aa8.59□□□□□ -1.03
USP6NL-205ENST00000609104 ZNF861PO60384 105 aa8.59□□□□□ -1.03
USP6NL-205ENST00000609104 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
USP6NL-205ENST00000609104 PRRC2CQ9Y520 2896 aaKnown RBP8.58□□□□□ -1.04
USP6NL-205ENST00000609104 LCA10Q71F78 164 aa8.56□□□□□ -1.04
USP6NL-205ENST00000609104 SPTBN4Q9H254 2564 aa8.56□□□□□ -1.04
USP6NL-205ENST00000609104 WWC2-AS2Q96NR7 200 aa8.55□□□□□ -1.04
USP6NL-205ENST00000609104 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
USP6NL-205ENST00000609104 KRTAP10-11P60412 298 aa8.54□□□□□ -1.04
USP6NL-205ENST00000609104 MTORP42345 2549 aa8.53□□□□□ -1.04
USP6NL-205ENST00000609104 CDC42SE1Q9NRR8 79 aa8.53□□□□□ -1.04
USP6NL-205ENST00000609104 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.04
USP6NL-205ENST00000609104 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
USP6NL-205ENST00000609104 CHD8Q9HCK8 2581 aa8.52□□□□□ -1.05
USP6NL-205ENST00000609104 Q8N1X5 172 aa8.51□□□□□ -1.05
USP6NL-205ENST00000609104 CEP350Q5VT06 3117 aa8.51□□□□□ -1.05
USP6NL-205ENST00000609104 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
USP6NL-205ENST00000609104 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
USP6NL-205ENST00000609104 FAM104AQ969W3 186 aa8.5□□□□□ -1.05
USP6NL-205ENST00000609104 KLK9Q2XQG4 91 aa8.49□□□□□ -1.05
USP6NL-205ENST00000609104 A0A087WTM6 91 aa8.47□□□□□ -1.05
USP6NL-205ENST00000609104 K7EIL1 84 aa8.47□□□□□ -1.05
USP6NL-205ENST00000609104 IGLV5-48A0A075B6I7 105 aa8.47□□□□□ -1.05
USP6NL-205ENST00000609104 TLX1NBP0CAT3 122 aa8.47□□□□□ -1.05
USP6NL-205ENST00000609104 SPANXA2-OT1Q8N9U9 137 aa8.46□□□□□ -1.05
USP6NL-205ENST00000609104 LUZP6Q538Z0 58 aa8.46□□□□□ -1.06
USP6NL-205ENST00000609104 PSORS1C2Q9UIG4 136 aa8.46□□□□□ -1.06
USP6NL-205ENST00000609104 IGLV7-43P04211 117 aa8.46□□□□□ -1.06
USP6NL-205ENST00000609104 GIG44P09565 113 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-205ENST00000609104 USP24Q9UPU5 2620 aa8.44□□□□□ -1.06
USP6NL-205ENST00000609104 POLQO75417 2590 aa8.43□□□□□ -1.06
USP6NL-205ENST00000609104 A0A1W2PNM2 257 aa8.42□□□□□ -1.06
USP6NL-205ENST00000609104 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
USP6NL-205ENST00000609104 C19orf73Q9NVV2 129 aa8.42□□□□□ -1.06
USP6NL-205ENST00000609104 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
USP6NL-205ENST00000609104 ZNF575Q86XF7 245 aa8.41□□□□□ -1.06
USP6NL-205ENST00000609104 KRTAP10-3P60369 221 aa8.41□□□□□ -1.06
USP6NL-205ENST00000609104 CASC10Q5T4H9 136 aa8.4□□□□□ -1.06
USP6NL-205ENST00000609104 CFAP54Q96N23 3096 aa8.38□□□□□ -1.07
USP6NL-205ENST00000609104 Q1T7F1 81 aa8.36□□□□□ -1.07
USP6NL-205ENST00000609104 PRR26Q8N8Z3 221 aa8.36□□□□□ -1.07
USP6NL-205ENST00000609104 OCR1Q9BZK8 76 aa8.33□□□□□ -1.08
USP6NL-205ENST00000609104 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
USP6NL-205ENST00000609104 LINC00612Q8N6U2 182 aa8.32□□□□□ -1.08
USP6NL-205ENST00000609104 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
USP6NL-205ENST00000609104 CEP295Q9C0D2 2601 aa8.3□□□□□ -1.08
USP6NL-205ENST00000609104 A0A1B0GU33 70 aa8.28□□□□□ -1.08
USP6NL-205ENST00000609104 FAM229BQ4G0N7 80 aa8.28□□□□□ -1.08
USP6NL-205ENST00000609104 LAMA2P24043 3122 aaKnown RBP8.27□□□□□ -1.09
USP6NL-205ENST00000609104 A0A0C4DFX4 3053 aa8.27□□□□□ -1.09
USP6NL-205ENST00000609104 CAMK2N1Q7Z7J9 78 aa8.26□□□□□ -1.09
USP6NL-205ENST00000609104 IGLV7-46A0A075B6I9 117 aa8.26□□□□□ -1.09
USP6NL-205ENST00000609104 FASNP49327 2511 aaKnown RBP8.25□□□□□ -1.09
USP6NL-205ENST00000609104 XIRP2A4UGR9 3374 aa8.25□□□□□ -1.09
USP6NL-205ENST00000609104 MKI67P46013 3256 aaKnown RBP8.25□□□□□ -1.09
USP6NL-205ENST00000609104 Q6ZSA8 131 aa8.24□□□□□ -1.09
USP6NL-205ENST00000609104 Q75L30 129 aa8.24□□□□□ -1.09
USP6NL-205ENST00000609104 HRES1P13985 223 aa8.23□□□□□ -1.09
USP6NL-205ENST00000609104 LINC00483Q53H64 154 aa8.23□□□□□ -1.09
USP6NL-205ENST00000609104 A0A096LNT2 108 aa8.23□□□□□ -1.09
USP6NL-205ENST00000609104 WIPF1O43516 503 aa8.2□□□□□ -1.1
USP6NL-205ENST00000609104 TNP2Q05952 138 aa8.16□□□□□ -1.1
USP6NL-205ENST00000609104 M0R2T5 61 aa8.16□□□□□ -1.1
USP6NL-205ENST00000609104 CELSR3Q9NYQ7 3312 aa8.15□□□□□ -1.1
USP6NL-205ENST00000609104 PRAC1Q96KF2 57 aa8.15□□□□□ -1.11
USP6NL-205ENST00000609104 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.15□□□□□ -1.11
USP6NL-205ENST00000609104 S4R3F8 94 aa8.13□□□□□ -1.11
USP6NL-205ENST00000609104 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
USP6NL-205ENST00000609104 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
USP6NL-205ENST00000609104 H3BS24 57 aa8.13□□□□□ -1.11
USP6NL-205ENST00000609104 Q5XG85 94 aa8.13□□□□□ -1.11
USP6NL-205ENST00000609104 Q8N9P0 234 aaPredicted RBP8.12□□□□□ -1.11
USP6NL-205ENST00000609104 AKAP13Q12802 2813 aa8.11□□□□□ -1.11
USP6NL-205ENST00000609104 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
USP6NL-205ENST00000609104 CYSTM1Q9H1C7 97 aa8.1□□□□□ -1.11
USP6NL-205ENST00000609104 REV3LO60673 3130 aa8.1□□□□□ -1.11
USP6NL-205ENST00000609104 KRTAP1-3Q8IUG1 177 aa8.08□□□□□ -1.12
USP6NL-205ENST00000609104 MMP24-AS1A0A0U1RRL7 71 aa8.08□□□□□ -1.12
USP6NL-205ENST00000609104 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
USP6NL-205ENST00000609104 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
USP6NL-205ENST00000609104 TRIOO75962 3097 aa8.07□□□□□ -1.12
USP6NL-205ENST00000609104 FREM2Q5SZK8 3169 aa8.07□□□□□ -1.12
USP6NL-205ENST00000609104 Q5VV11 94 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms