RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 HIST1H4GQ99525 98 aa8.03□□□□□ -1.12
CTSA-213ENST00000606782 IGLV6-57P01721 117 aa8.02□□□□□ -1.13
CTSA-213ENST00000606782 TAL2Q16559 108 aa8.02□□□□□ -1.13
CTSA-213ENST00000606782 C12orf57Q99622 126 aa8.02□□□□□ -1.13
CTSA-213ENST00000606782 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
CTSA-213ENST00000606782 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
CTSA-213ENST00000606782 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
CTSA-213ENST00000606782 ZNF861PO60384 105 aa8□□□□□ -1.13
CTSA-213ENST00000606782 DDTP30046 118 aa8□□□□□ -1.13
CTSA-213ENST00000606782 A4D1N5 150 aa7.99□□□□□ -1.13
CTSA-213ENST00000606782 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
CTSA-213ENST00000606782 BCE1O60756 84 aa7.98□□□□□ -1.13
CTSA-213ENST00000606782 S100A7L2Q5SY68 101 aa7.98□□□□□ -1.13
CTSA-213ENST00000606782 CEND1Q8N111 149 aa7.98□□□□□ -1.13
CTSA-213ENST00000606782 TMEM126AQ9H061 195 aa7.98□□□□□ -1.13
CTSA-213ENST00000606782 PRYO14603 147 aa7.97□□□□□ -1.13
CTSA-213ENST00000606782 SPRR1AP35321 89 aa7.97□□□□□ -1.13
CTSA-213ENST00000606782 RPL13AP40429 203 aaKnown RBP7.97□□□□□ -1.13
CTSA-213ENST00000606782 TRAV13-2A0A0B4J235 113 aa7.96□□□□□ -1.14
CTSA-213ENST00000606782 HSD52Q0P140 79 aa7.96□□□□□ -1.14
CTSA-213ENST00000606782 OR13C6PQ8NH95 151 aa7.96□□□□□ -1.14
CTSA-213ENST00000606782 RNF213Q63HN8 5207 aa7.95□□□□□ -1.14
CTSA-213ENST00000606782 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
CTSA-213ENST00000606782 CBY1Q9Y3M2 126 aa7.95□□□□□ -1.14
CTSA-213ENST00000606782 A6NDN8 102 aa7.94□□□□□ -1.14
CTSA-213ENST00000606782 CFC1BP0CG36 223 aa7.94□□□□□ -1.14
CTSA-213ENST00000606782 CFC1P0CG37 223 aa7.94□□□□□ -1.14
CTSA-213ENST00000606782 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
CTSA-213ENST00000606782 TRAV23DV6A0A075B6W5 121 aa7.93□□□□□ -1.14
CTSA-213ENST00000606782 TSTD3H0UI37 97 aa7.93□□□□□ -1.14
CTSA-213ENST00000606782 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
CTSA-213ENST00000606782 FXYD2P54710 66 aa7.92□□□□□ -1.14
CTSA-213ENST00000606782 ZNF73O43830 326 aaPredicted RBP7.91□□□□□ -1.14
CTSA-213ENST00000606782 FAM19A1Q7Z5A9 133 aa7.91□□□□□ -1.14
CTSA-213ENST00000606782 A0A0B4J2C4 111 aa7.9□□□□□ -1.14
CTSA-213ENST00000606782 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
CTSA-213ENST00000606782 A6NJY4 79 aa7.9□□□□□ -1.14
CTSA-213ENST00000606782 B5MCH6 92 aa7.9□□□□□ -1.14
CTSA-213ENST00000606782 CTAG1AP78358 180 aa7.9□□□□□ -1.14
CTSA-213ENST00000606782 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
CTSA-213ENST00000606782 UBE2AP49459 152 aa7.89□□□□□ -1.15
CTSA-213ENST00000606782 BVES-AS1Q5T3Y7 98 aa7.89□□□□□ -1.15
CTSA-213ENST00000606782 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
CTSA-213ENST00000606782 TRBV7-6A0A0J9YX20 115 aa7.88□□□□□ -1.15
CTSA-213ENST00000606782 A0A1B0GWB2 263 aa7.88□□□□□ -1.15
CTSA-213ENST00000606782 PRLHP81277 87 aa7.88□□□□□ -1.15
CTSA-213ENST00000606782 LPAP08519 4548 aa7.88□□□□□ -1.15
CTSA-213ENST00000606782 A0A087X002 238 aa7.87□□□□□ -1.15
CTSA-213ENST00000606782 HINT1P49773 126 aaPredicted RBP7.87□□□□□ -1.15
CTSA-213ENST00000606782 C6orf99Q4VX62 202 aa7.87□□□□□ -1.15
CTSA-213ENST00000606782 RAB37Q96AX2 223 aa7.87□□□□□ -1.15
CTSA-213ENST00000606782 PRO1854Q9UHT4 67 aa7.87□□□□□ -1.15
CTSA-213ENST00000606782 Q6ZRX8 168 aa7.86□□□□□ -1.15
CTSA-213ENST00000606782 CRYGAP11844 174 aa7.85□□□□□ -1.15
CTSA-213ENST00000606782 Q9BRP9 147 aa7.85□□□□□ -1.15
CTSA-213ENST00000606782 NHP2Q9NX24 153 aaKnown RBP7.85□□□□□ -1.15
CTSA-213ENST00000606782 M0R143 59 aa7.84□□□□□ -1.15
CTSA-213ENST00000606782 COX7BP24311 80 aa7.84□□□□□ -1.15
CTSA-213ENST00000606782 ELOF1P60002 83 aaKnown RBP7.84□□□□□ -1.15
CTSA-213ENST00000606782 SMCR5Q8TEV8 140 aa7.84□□□□□ -1.15
CTSA-213ENST00000606782 FAM229BQ4G0N7 80 aa7.83□□□□□ -1.16
CTSA-213ENST00000606782 HIGD2AQ9BW72 106 aa7.83□□□□□ -1.16
CTSA-213ENST00000606782 ERC2-IT1O76042 136 aa7.82□□□□□ -1.16
CTSA-213ENST00000606782 VAMP3Q15836 100 aa7.82□□□□□ -1.16
CTSA-213ENST00000606782 PRR4Q16378 134 aa7.82□□□□□ -1.16
CTSA-213ENST00000606782 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
CTSA-213ENST00000606782 H7C2G1 150 aa7.81□□□□□ -1.16
CTSA-213ENST00000606782 K7ERJ3 54 aa7.81□□□□□ -1.16
CTSA-213ENST00000606782 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
CTSA-213ENST00000606782 DHRS4-AS1Q9P1J3 65 aa7.81□□□□□ -1.16
CTSA-213ENST00000606782 ANAPC11Q9NYG5 84 aa7.8□□□□□ -1.16
CTSA-213ENST00000606782 TSPAN13O95857 204 aa7.79□□□□□ -1.16
CTSA-213ENST00000606782 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
CTSA-213ENST00000606782 H0YGX0 51 aa7.77□□□□□ -1.17
CTSA-213ENST00000606782 Q1RN00 199 aa7.77□□□□□ -1.17
CTSA-213ENST00000606782 SPRR4Q96PI1 79 aa7.77□□□□□ -1.17
CTSA-213ENST00000606782 ZNF706Q9Y5V0 76 aaPredicted RBP7.76□□□□□ -1.17
CTSA-213ENST00000606782 TRIAP1O43715 76 aa7.75□□□□□ -1.17
CTSA-213ENST00000606782 ST20-AS1Q8NBB2 130 aa7.75□□□□□ -1.17
CTSA-213ENST00000606782 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
CTSA-213ENST00000606782 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
CTSA-213ENST00000606782 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
CTSA-213ENST00000606782 SLC25A20O43772 301 aa7.73□□□□□ -1.17
CTSA-213ENST00000606782 BATFQ16520 125 aa7.73□□□□□ -1.17
CTSA-213ENST00000606782 COX6CP09669 75 aa7.72□□□□□ -1.17
CTSA-213ENST00000606782 SPRR1BP22528 89 aa7.72□□□□□ -1.17
CTSA-213ENST00000606782 PSMB2P49721 201 aa7.72□□□□□ -1.17
CTSA-213ENST00000606782 GAGE2AQ6NT46 116 aa7.72□□□□□ -1.17
CTSA-213ENST00000606782 SNHG12Q9BXW3 62 aa7.72□□□□□ -1.17
CTSA-213ENST00000606782 A0A1B0GX51 115 aa7.71□□□□□ -1.18
CTSA-213ENST00000606782 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.18
CTSA-213ENST00000606782 FAM218AQ96MZ4 157 aa7.71□□□□□ -1.18
CTSA-213ENST00000606782 IGLV5-48A0A075B6I7 105 aa7.7□□□□□ -1.18
CTSA-213ENST00000606782 PCP4L1A6NKN8 68 aa7.7□□□□□ -1.18
CTSA-213ENST00000606782 MUC2Q02817 5179 aa7.69□□□□□ -1.18
CTSA-213ENST00000606782 SNCGO76070 127 aa7.69□□□□□ -1.18
CTSA-213ENST00000606782 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
CTSA-213ENST00000606782 TEX49A0A1B0GTD5 131 aa7.68□□□□□ -1.18
CTSA-213ENST00000606782 SCGB1C2P0DMR2 95 aa7.68□□□□□ -1.18
CTSA-213ENST00000606782 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms