RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PRO1854Q9UHT4 67 aa12.61□□□□□ -0.39
PNKP-215ENST00000600910 CBY1Q9Y3M2 126 aa12.61□□□□□ -0.39
PNKP-215ENST00000600910 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
PNKP-215ENST00000600910 SPRR1AP35321 89 aa12.59□□□□□ -0.39
PNKP-215ENST00000600910 BATFQ16520 125 aa12.59□□□□□ -0.39
PNKP-215ENST00000600910 KRTAP17-1Q9BYP8 105 aa12.59□□□□□ -0.39
PNKP-215ENST00000600910 H7C2G1 150 aa12.59□□□□□ -0.39
PNKP-215ENST00000600910 ZNF73O43830 326 aaPredicted RBP12.59□□□□□ -0.39
PNKP-215ENST00000600910 BCE1O60756 84 aa12.59□□□□□ -0.39
PNKP-215ENST00000600910 SMIM11BQ8TCY0 68 aa12.59□□□□□ -0.39
PNKP-215ENST00000600910 Q5VSD8 79 aa12.58□□□□□ -0.4
PNKP-215ENST00000600910 Q8N1X5 172 aa12.58□□□□□ -0.4
PNKP-215ENST00000600910 KRTAP4-16G5E9R7 235 aaPredicted RBP12.56□□□□□ -0.4
PNKP-215ENST00000600910 PLA2G1BP04054 148 aaKnown RBP12.55□□□□□ -0.4
PNKP-215ENST00000600910 C6orf99Q4VX62 202 aa12.55□□□□□ -0.4
PNKP-215ENST00000600910 FAM19A1Q7Z5A9 133 aa12.55□□□□□ -0.4
PNKP-215ENST00000600910 DIRC1Q969H9 104 aa12.55□□□□□ -0.4
PNKP-215ENST00000600910 ETDCA0A1B0GVM5 59 aa12.55□□□□□ -0.4
PNKP-215ENST00000600910 KRTAP10-4P60372 401 aaPredicted RBP12.55□□□□□ -0.4
PNKP-215ENST00000600910 IGLV7-43P04211 117 aa12.54□□□□□ -0.4
PNKP-215ENST00000600910 Q1RN00 199 aa12.54□□□□□ -0.4
PNKP-215ENST00000600910 RPL28P46779 137 aaKnown RBP12.52□□□□□ -0.4
PNKP-215ENST00000600910 UBE2AP49459 152 aa12.52□□□□□ -0.4
PNKP-215ENST00000600910 PRLHP81277 87 aa12.52□□□□□ -0.4
PNKP-215ENST00000600910 B5MCH6 92 aa12.51□□□□□ -0.41
PNKP-215ENST00000600910 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
PNKP-215ENST00000600910 KRTAP13-1Q8IUC0 172 aa12.5□□□□□ -0.41
PNKP-215ENST00000600910 TSPAN13O95857 204 aa12.49□□□□□ -0.41
PNKP-215ENST00000600910 Q6ZRX8 168 aa12.49□□□□□ -0.41
PNKP-215ENST00000600910 ZNF861PO60384 105 aa12.48□□□□□ -0.41
PNKP-215ENST00000600910 SRRM2Q9UQ35 2752 aaKnown RBP12.48□□□□□ -0.41
PNKP-215ENST00000600910 H0Y9J4 135 aa12.48□□□□□ -0.41
PNKP-215ENST00000600910 COX7BP24311 80 aa12.48□□□□□ -0.41
PNKP-215ENST00000600910 ELOF1P60002 83 aaKnown RBP12.48□□□□□ -0.41
PNKP-215ENST00000600910 HERC2O95714 4834 aa12.47□□□□□ -0.41
PNKP-215ENST00000600910 TRBV7-6A0A0J9YX20 115 aa12.47□□□□□ -0.41
PNKP-215ENST00000600910 VAMP3Q15836 100 aa12.45□□□□□ -0.42
PNKP-215ENST00000600910 Q9BRP9 147 aa12.44□□□□□ -0.42
PNKP-215ENST00000600910 HIGD2AQ9BW72 106 aa12.44□□□□□ -0.42
PNKP-215ENST00000600910 TRIAP1O43715 76 aa12.44□□□□□ -0.42
PNKP-215ENST00000600910 PSMB2P49721 201 aa12.44□□□□□ -0.42
PNKP-215ENST00000600910 SMCR5Q8TEV8 140 aa12.42□□□□□ -0.42
PNKP-215ENST00000600910 SPINK6Q6UWN8 80 aa12.4□□□□□ -0.42
PNKP-215ENST00000600910 KRTAP4-5Q9BYR2 181 aa12.4□□□□□ -0.42
PNKP-215ENST00000600910 NAA38Q9BRA0 125 aaKnown RBP12.4□□□□□ -0.42
PNKP-215ENST00000600910 DHRS4-AS1Q9P1J3 65 aa12.39□□□□□ -0.43
PNKP-215ENST00000600910 TAX1BP3O14907 124 aa12.38□□□□□ -0.43
PNKP-215ENST00000600910 ERC2-IT1O76042 136 aa12.38□□□□□ -0.43
PNKP-215ENST00000600910 H0YGX0 51 aa12.37□□□□□ -0.43
PNKP-215ENST00000600910 COX6CP09669 75 aa12.37□□□□□ -0.43
PNKP-215ENST00000600910 COL5A1-AS1Q5SY13 56 aa12.37□□□□□ -0.43
PNKP-215ENST00000600910 LINC00575Q6W349 94 aa12.37□□□□□ -0.43
PNKP-215ENST00000600910 INAFM2P0DMQ5 153 aa12.37□□□□□ -0.43
PNKP-215ENST00000600910 H3BUT2 72 aa12.34□□□□□ -0.43
PNKP-215ENST00000600910 SLC25A20O43772 301 aa12.34□□□□□ -0.43
PNKP-215ENST00000600910 SCGB1C2P0DMR2 95 aa12.34□□□□□ -0.43
PNKP-215ENST00000600910 FAM218AQ96MZ4 157 aa12.34□□□□□ -0.43
PNKP-215ENST00000600910 PKHD1L1Q86WI1 4243 aa12.34□□□□□ -0.43
PNKP-215ENST00000600910 C9orf118A6NHY6 69 aa12.33□□□□□ -0.43
PNKP-215ENST00000600910 CLEC2BQ92478 149 aa12.33□□□□□ -0.43
PNKP-215ENST00000600910 hADV29S1A0JD25 119 aa12.33□□□□□ -0.44
PNKP-215ENST00000600910 ST20-AS1Q8NBB2 130 aa12.29□□□□□ -0.44
PNKP-215ENST00000600910 SPRR4Q96PI1 79 aa12.28□□□□□ -0.44
PNKP-215ENST00000600910 ZNF706Q9Y5V0 76 aaPredicted RBP12.28□□□□□ -0.44
PNKP-215ENST00000600910 SNCGO76070 127 aa12.27□□□□□ -0.44
PNKP-215ENST00000600910 A0A1B0GX51 115 aa12.26□□□□□ -0.45
PNKP-215ENST00000600910 A0A1W2PPM0 123 aa12.26□□□□□ -0.45
PNKP-215ENST00000600910 LYRM7Q5U5X0 104 aa12.26□□□□□ -0.45
PNKP-215ENST00000600910 Q6ZQY7 126 aa12.26□□□□□ -0.45
PNKP-215ENST00000600910 KRTAP1-4P0C5Y4 121 aa12.25□□□□□ -0.45
PNKP-215ENST00000600910 GAGE2AQ6NT46 116 aa12.25□□□□□ -0.45
PNKP-215ENST00000600910 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
PNKP-215ENST00000600910 LST1O00453 97 aa12.23□□□□□ -0.45
PNKP-215ENST00000600910 TCL1BO95988 128 aa12.23□□□□□ -0.45
PNKP-215ENST00000600910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.23□□□□□ -0.45
PNKP-215ENST00000600910 DEFB105AQ8NG35 78 aa12.23□□□□□ -0.45
PNKP-215ENST00000600910 ANAPC11Q9NYG5 84 aa12.23□□□□□ -0.45
PNKP-215ENST00000600910 FABP2P12104 132 aa12.22□□□□□ -0.45
PNKP-215ENST00000600910 LINC01547P58512 204 aaPredicted RBP12.21□□□□□ -0.46
PNKP-215ENST00000600910 IGLV5-48A0A075B6I7 105 aa12.2□□□□□ -0.46
PNKP-215ENST00000600910 DNAL4O96015 105 aa12.2□□□□□ -0.46
PNKP-215ENST00000600910 LINC00483Q53H64 154 aa12.2□□□□□ -0.46
PNKP-215ENST00000600910 FLG2Q5D862 2391 aaPredicted RBP12.19□□□□□ -0.46
PNKP-215ENST00000600910 TRACP01848 142 aa12.19□□□□□ -0.46
PNKP-215ENST00000600910 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
PNKP-215ENST00000600910 TRBV20-1A0A075B6N2 111 aa12.19□□□□□ -0.46
PNKP-215ENST00000600910 TEX49A0A1B0GTD5 131 aa12.18□□□□□ -0.46
PNKP-215ENST00000600910 MYCBP2O75592 4640 aa12.18□□□□□ -0.46
PNKP-215ENST00000600910 SPRR1BP22528 89 aa12.17□□□□□ -0.46
PNKP-215ENST00000600910 Q8N377 158 aa12.17□□□□□ -0.46
PNKP-215ENST00000600910 LRP1Q07954 4544 aaKnown RBP12.17□□□□□ -0.46
PNKP-215ENST00000600910 A0A087X002 238 aa12.15□□□□□ -0.46
PNKP-215ENST00000600910 FAM229BQ4G0N7 80 aa12.15□□□□□ -0.46
PNKP-215ENST00000600910 OCIAD2Q56VL3 154 aa12.15□□□□□ -0.46
PNKP-215ENST00000600910 SPCS1Q9Y6A9 102 aa12.15□□□□□ -0.47
PNKP-215ENST00000600910 LINC01600Q96MT4 127 aa12.14□□□□□ -0.47
PNKP-215ENST00000600910 ORMDL1Q9P0S3 153 aa12.14□□□□□ -0.47
PNKP-215ENST00000600910 FAT3Q8TDW7 4589 aa12.13□□□□□ -0.47
PNKP-215ENST00000600910 CRYGAP11844 174 aa12.13□□□□□ -0.47
PNKP-215ENST00000600910 PRR26Q8N8Z3 221 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms