RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 M0QXV9 152 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 NUPR1O60356 82 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 HBDP02042 147 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 IGLC3P0DOY3 106 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 RAB5BP61020 215 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 NDUFA5Q16718 116 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 SFTA2Q6UW10 78 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 SVBPQ8N300 66 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 LINC00469Q8N7U9 141 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 COX7B2Q8TF08 81 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 YPEL4Q96NS1 127 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 SMCO4Q9NRQ5 59 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 TOMM7Q9P0U1 55 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 TRAPPC1Q9Y5R8 145 aa2□□□□□ -2.09
CKS1BP3-201ENST00000600888 LRP2P98164 4655 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 TNXBP22105 4242 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 TRAV12-1A0A0B4J245 112 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 H3BRM9 83 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 APOC3P02656 99 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 ZNF22P17026 224 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 UBE2BP63146 152 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 COX17Q14061 63 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 FAM19A5Q7Z5A7 132 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 MRPL55Q7Z7F7 128 aaKnown RBP1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 CHCHD1Q96BP2 118 aaKnown RBP1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 XAGE1AQ9HD64 81 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 C22orf24Q9Y442 160 aa1.99□□□□□ -2.09
CKS1BP3-201ENST00000600888 BCE1O60756 84 aa1.98□□□□□ -2.09
CKS1BP3-201ENST00000600888 SPINK8P0C7L1 97 aa1.98□□□□□ -2.09
CKS1BP3-201ENST00000600888 MOBPQ13875 183 aa1.98□□□□□ -2.09
CKS1BP3-201ENST00000600888 BAGE3Q86Y29 109 aa1.98□□□□□ -2.09
CKS1BP3-201ENST00000600888 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
CKS1BP3-201ENST00000600888 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
CKS1BP3-201ENST00000600888 C11orf86A6NJI1 115 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 HSBP1L1C9JCN9 74 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 RPL28P46779 137 aaKnown RBP1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 UBE2AP49459 152 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 CTAG1AP78358 180 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 COA6Q5JTJ3 125 aaKnown RBP1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 IFI27L1Q96BM0 104 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 ZNF625Q96I27 306 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 SND1-IT1Q9HBX3 110 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 ERG28Q9UKR5 140 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
CKS1BP3-201ENST00000600888 LOC107984156A0A0G2JMH3 177 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 TMEM223A0PJW6 202 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 LINC00587B1AMM8 73 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 HSBP1O75506 76 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 NDUFA6P56556 154 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 PMCHL1Q16048 86 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 FAM229BQ4G0N7 80 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 C5orf47Q569G3 176 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 TMEM170BQ5T4T1 132 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 ARL17AQ8IVW1 177 aa1.96□□□□□ -2.1
CKS1BP3-201ENST00000600888 IGKV2D-26A0A0A0MRZ7 120 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 LEPROTL1O95214 131 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 TSPAN13O95857 204 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 TRGC2P03986 189 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 CRYGAP11844 174 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 PFN2P35080 140 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 VAMP3Q15836 100 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 CBLN2Q8IUK8 224 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 TMEM126AQ9H061 195 aa1.95□□□□□ -2.1
CKS1BP3-201ENST00000600888 MYMXA0A1B0GTQ4 84 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 COLCA2A8K830 154 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 M0R378 163 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 LEPROTO15243 131 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 PLNP26678 52 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 SPRR1AP35321 89 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 FAM19A2Q8N3H0 131 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 LINC00337Q8N6G1 96 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 Q8NDZ9 215 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 PLEKHB2Q96CS7 222 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 KCNQ1DNQ9H478 68 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 NDUFA12Q9UI09 145 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 HSPB8Q9UJY1 196 aa1.94□□□□□ -2.1
CKS1BP3-201ENST00000600888 TRBV10-2A0A0K0K1G8 114 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 TMEM238C9JI98 176 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 SCO1O75880 301 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 DPM2O94777 84 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 SMIM13P0DJ93 91 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 LINC00158P58513 81 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 KRTAP13-2Q52LG2 175 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 MEIG1Q5JSS6 88 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 FAM19A1Q7Z5A9 133 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 SLC7A5P1Q8MH63 180 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 MIR7-3HGQ8N6C7 128 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 MAP1LC3CQ9BXW4 147 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 LPAP08519 4548 aa1.93□□□□□ -2.1
CKS1BP3-201ENST00000600888 J3QQQ9 107 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BKO60814 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 NDUFC2O95298 119 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 IGKCP01834 107 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BJP06899 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BOP23527 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BBP33778 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BDP58876 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 TSPEAR-AS2P59090 65 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BCP62807 126 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms