RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FAM236BA0A1B0GV22 79 aa11.3□□□□□ -0.6
SHKBP1-224ENST00000600718 ALMS1Q8TCU4 4167 aa11.29□□□□□ -0.6
SHKBP1-224ENST00000600718 FAM168BA1KXE4 195 aa11.29□□□□□ -0.6
SHKBP1-224ENST00000600718 IGKV2-24A0A0C4DH68 120 aa11.28□□□□□ -0.6
SHKBP1-224ENST00000600718 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 KRTAP7-1Q8IUC3 87 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 SMCR5Q8TEV8 140 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 RTL8CO15255 209 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 C6orf99Q4VX62 202 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 C7orf33Q8WU49 177 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 DNAH6Q9C0G6 4158 aa11.27□□□□□ -0.61
SHKBP1-224ENST00000600718 TNP2Q05952 138 aa11.26□□□□□ -0.61
SHKBP1-224ENST00000600718 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-224ENST00000600718 KMT2AQ03164 3969 aa11.26□□□□□ -0.61
SHKBP1-224ENST00000600718 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
SHKBP1-224ENST00000600718 INAFM2P0DMQ5 153 aa11.25□□□□□ -0.61
SHKBP1-224ENST00000600718 C3orf22Q8N5N4 141 aa11.25□□□□□ -0.61
SHKBP1-224ENST00000600718 LCE6AA0A183 80 aa11.25□□□□□ -0.61
SHKBP1-224ENST00000600718 UQCRQO14949 82 aa11.24□□□□□ -0.61
SHKBP1-224ENST00000600718 FAM218AQ96MZ4 157 aa11.24□□□□□ -0.61
SHKBP1-224ENST00000600718 MRPL55Q7Z7F7 128 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-224ENST00000600718 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
SHKBP1-224ENST00000600718 ZNF73O43830 326 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-224ENST00000600718 LINC00167Q96N53 147 aa11.23□□□□□ -0.61
SHKBP1-224ENST00000600718 KCNQ1DNQ9H478 68 aa11.23□□□□□ -0.61
SHKBP1-224ENST00000600718 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
SHKBP1-224ENST00000600718 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
SHKBP1-224ENST00000600718 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.61
SHKBP1-224ENST00000600718 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
SHKBP1-224ENST00000600718 IGLV1-50A0A075B6I6 118 aa11.21□□□□□ -0.62
SHKBP1-224ENST00000600718 C9orf153Q5TBE3 101 aa11.21□□□□□ -0.62
SHKBP1-224ENST00000600718 A0A1B0GX51 115 aa11.2□□□□□ -0.62
SHKBP1-224ENST00000600718 A0A087WYN8 130 aa11.19□□□□□ -0.62
SHKBP1-224ENST00000600718 FUSP35637 526 aaKnown RBP eCLIP11.19□□□□□ -0.62
SHKBP1-224ENST00000600718 RPL37AP8A6NKH3 93 aa11.18□□□□□ -0.62
SHKBP1-224ENST00000600718 PRYO14603 147 aa11.17□□□□□ -0.62
SHKBP1-224ENST00000600718 COX7BP24311 80 aa11.17□□□□□ -0.62
SHKBP1-224ENST00000600718 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
SHKBP1-224ENST00000600718 LINC00575Q6W349 94 aa11.17□□□□□ -0.62
SHKBP1-224ENST00000600718 HIST1H4AP62805 103 aaKnown RBP11.17□□□□□ -0.62
SHKBP1-224ENST00000600718 SPACA4Q8TDM5 124 aa11.17□□□□□ -0.62
SHKBP1-224ENST00000600718 DPH3Q96FX2 82 aa11.17□□□□□ -0.62
SHKBP1-224ENST00000600718 DNAL4O96015 105 aa11.16□□□□□ -0.62
SHKBP1-224ENST00000600718 COX7CP15954 63 aa11.16□□□□□ -0.62
SHKBP1-224ENST00000600718 ELOF1P60002 83 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-224ENST00000600718 GAGE2AQ6NT46 116 aa11.16□□□□□ -0.62
SHKBP1-224ENST00000600718 DNAH2Q9P225 4427 aa11.15□□□□□ -0.62
SHKBP1-224ENST00000600718 PANO1I0J062 215 aa11.15□□□□□ -0.62
SHKBP1-224ENST00000600718 ATOX1O00244 68 aa11.14□□□□□ -0.63
SHKBP1-224ENST00000600718 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-224ENST00000600718 hADV29S1A0JD25 119 aa11.13□□□□□ -0.63
SHKBP1-224ENST00000600718 EPM2AB3EWF7 344 aa11.13□□□□□ -0.63
SHKBP1-224ENST00000600718 SPRR1AP35321 89 aa11.13□□□□□ -0.63
SHKBP1-224ENST00000600718 CRYGAP11844 174 aa11.12□□□□□ -0.63
SHKBP1-224ENST00000600718 KRTAP10-2P60368 255 aa11.12□□□□□ -0.63
SHKBP1-224ENST00000600718 OBSCN-AS1Q96MR7 158 aa11.12□□□□□ -0.63
SHKBP1-224ENST00000600718 PHF5AQ7RTV0 110 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-224ENST00000600718 LINC00528Q8N1L1 170 aa11.11□□□□□ -0.63
SHKBP1-224ENST00000600718 KRTAP4-16G5E9R7 235 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-224ENST00000600718 REG3GQ6UW15 175 aa11.1□□□□□ -0.63
SHKBP1-224ENST00000600718 DNAH17Q9UFH2 4485 aa11.1□□□□□ -0.63
SHKBP1-224ENST00000600718 ETDCA0A1B0GVM5 59 aa11.09□□□□□ -0.63
SHKBP1-224ENST00000600718 Q6JHZ5 121 aa11.09□□□□□ -0.63
SHKBP1-224ENST00000600718 UBE2BP63146 152 aa11.08□□□□□ -0.64
SHKBP1-224ENST00000600718 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
SHKBP1-224ENST00000600718 ORMDL1Q9P0S3 153 aa11.08□□□□□ -0.64
SHKBP1-224ENST00000600718 PLAC8Q9NZF1 115 aa11.07□□□□□ -0.64
SHKBP1-224ENST00000600718 J3KT08 172 aa11.07□□□□□ -0.64
SHKBP1-224ENST00000600718 Q6ZRX8 168 aa11.06□□□□□ -0.64
SHKBP1-224ENST00000600718 RPS28P62857 69 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-224ENST00000600718 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-224ENST00000600718 DHRS4-AS1Q9P1J3 65 aa11.05□□□□□ -0.64
SHKBP1-224ENST00000600718 HYDINQ4G0P3 5121 aa11.04□□□□□ -0.64
SHKBP1-224ENST00000600718 C14orf132Q9NPU4 83 aa11.04□□□□□ -0.64
SHKBP1-224ENST00000600718 H3BQ85 93 aa11.03□□□□□ -0.64
SHKBP1-224ENST00000600718 FRAS1Q86XX4 4008 aa11.03□□□□□ -0.64
SHKBP1-224ENST00000600718 TMEM256-PLSCR3K7ERE1 68 aa11.03□□□□□ -0.64
SHKBP1-224ENST00000600718 Q6ZQY7 126 aa11.03□□□□□ -0.64
SHKBP1-224ENST00000600718 KRTAP11-1Q8IUC1 163 aa11.03□□□□□ -0.64
SHKBP1-224ENST00000600718 LINC00846Q9NV44 126 aa11.02□□□□□ -0.65
SHKBP1-224ENST00000600718 GHRHP01286 108 aa11.01□□□□□ -0.65
SHKBP1-224ENST00000600718 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
SHKBP1-224ENST00000600718 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
SHKBP1-224ENST00000600718 Q9BRP9 147 aa11□□□□□ -0.65
SHKBP1-224ENST00000600718 HECTD4Q9Y4D8 3996 aa11□□□□□ -0.65
SHKBP1-224ENST00000600718 IGKV3D-7A0A0C4DH55 119 aa10.99□□□□□ -0.65
SHKBP1-224ENST00000600718 KRTAP10-1P60331 282 aa10.99□□□□□ -0.65
SHKBP1-224ENST00000600718 TMEM258P61165 79 aa10.99□□□□□ -0.65
SHKBP1-224ENST00000600718 SACSQ9NZJ4 4579 aa10.98□□□□□ -0.65
SHKBP1-224ENST00000600718 FAM30AQ9NZY2 134 aa10.97□□□□□ -0.65
SHKBP1-224ENST00000600718 H0Y9J4 135 aa10.97□□□□□ -0.65
SHKBP1-224ENST00000600718 Q6ZSA8 131 aa10.97□□□□□ -0.65
SHKBP1-224ENST00000600718 CCKP06307 115 aa10.96□□□□□ -0.65
SHKBP1-224ENST00000600718 BCE1O60756 84 aa10.96□□□□□ -0.66
SHKBP1-224ENST00000600718 JMJD7-PLA2G4BH0Y9G9 81 aa10.94□□□□□ -0.66
SHKBP1-224ENST00000600718 PRLHP81277 87 aa10.94□□□□□ -0.66
SHKBP1-224ENST00000600718 ATP5EP2Q5VTU8 51 aa10.94□□□□□ -0.66
SHKBP1-224ENST00000600718 CIRBP-AS1Q8TBR5 109 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms