RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 UPK3BQ9BT76 320 aa12.76□□□□□ -0.37
GRAMD1A-207ENST00000598118 LINC01547P58512 204 aaPredicted RBP12.75□□□□□ -0.37
GRAMD1A-207ENST00000598118 MRAPQ8TCY5 172 aa12.75□□□□□ -0.37
GRAMD1A-207ENST00000598118 NKAPP1Q8N9T2 125 aa12.74□□□□□ -0.37
GRAMD1A-207ENST00000598118 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
GRAMD1A-207ENST00000598118 KCNQ1DNQ9H478 68 aa12.74□□□□□ -0.37
GRAMD1A-207ENST00000598118 HAMPP81172 84 aa12.73□□□□□ -0.37
GRAMD1A-207ENST00000598118 SMIM20Q8N5G0 67 aa12.73□□□□□ -0.37
GRAMD1A-207ENST00000598118 GHRHP01286 108 aa12.73□□□□□ -0.37
GRAMD1A-207ENST00000598118 FAM168BA1KXE4 195 aa12.72□□□□□ -0.37
GRAMD1A-207ENST00000598118 TLX1NBP0CAT3 122 aa12.72□□□□□ -0.37
GRAMD1A-207ENST00000598118 K7EIL1 84 aa12.71□□□□□ -0.37
GRAMD1A-207ENST00000598118 RPL37AP8A6NKH3 93 aa12.68□□□□□ -0.38
GRAMD1A-207ENST00000598118 KRTAP7-1Q8IUC3 87 aa12.68□□□□□ -0.38
GRAMD1A-207ENST00000598118 PLA2G2DQ9UNK4 145 aa12.67□□□□□ -0.38
GRAMD1A-207ENST00000598118 DEFB105AQ8NG35 78 aa12.65□□□□□ -0.38
GRAMD1A-207ENST00000598118 LYSTQ99698 3801 aa12.65□□□□□ -0.39
GRAMD1A-207ENST00000598118 SCXQ7RTU7 201 aa12.64□□□□□ -0.39
GRAMD1A-207ENST00000598118 Q8N377 158 aa12.64□□□□□ -0.39
GRAMD1A-207ENST00000598118 CXCL6P80162 114 aa12.64□□□□□ -0.39
GRAMD1A-207ENST00000598118 IGLV1-50A0A075B6I6 118 aa12.63□□□□□ -0.39
GRAMD1A-207ENST00000598118 KRTAP4-16G5E9R7 235 aaPredicted RBP12.63□□□□□ -0.39
GRAMD1A-207ENST00000598118 IGLV5-37A0A075B6J1 123 aa12.62□□□□□ -0.39
GRAMD1A-207ENST00000598118 Q9BRP9 147 aa12.62□□□□□ -0.39
GRAMD1A-207ENST00000598118 DNAH10Q8IVF4 4471 aa12.62□□□□□ -0.39
GRAMD1A-207ENST00000598118 MGAM2Q2M2H8 2515 aa12.61□□□□□ -0.39
GRAMD1A-207ENST00000598118 Q6ZRX8 168 aa12.61□□□□□ -0.39
GRAMD1A-207ENST00000598118 RMI2Q96E14 147 aa12.6□□□□□ -0.39
GRAMD1A-207ENST00000598118 SPRR1AP35321 89 aa12.59□□□□□ -0.39
GRAMD1A-207ENST00000598118 FAM19A5Q7Z5A7 132 aaPredicted RBP12.58□□□□□ -0.4
GRAMD1A-207ENST00000598118 PRYO14603 147 aa12.58□□□□□ -0.4
GRAMD1A-207ENST00000598118 DNAH9Q9NYC9 4486 aa12.57□□□□□ -0.4
GRAMD1A-207ENST00000598118 DHRS4-AS1Q9P1J3 65 aa12.57□□□□□ -0.4
GRAMD1A-207ENST00000598118 ST20-AS1Q8NBB2 130 aa12.56□□□□□ -0.4
GRAMD1A-207ENST00000598118 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
GRAMD1A-207ENST00000598118 ETDCA0A1B0GVM5 59 aa12.55□□□□□ -0.4
GRAMD1A-207ENST00000598118 MRPL55Q7Z7F7 128 aaKnown RBP12.55□□□□□ -0.4
GRAMD1A-207ENST00000598118 STAB2Q8WWQ8 2551 aa12.55□□□□□ -0.4
GRAMD1A-207ENST00000598118 IGLV5-48A0A075B6I7 105 aa12.55□□□□□ -0.4
GRAMD1A-207ENST00000598118 COL7A1Q02388 2944 aa12.54□□□□□ -0.4
GRAMD1A-207ENST00000598118 LOC107984640A0A0U1RRK4 108 aa12.54□□□□□ -0.4
GRAMD1A-207ENST00000598118 C3orf84H3BNL1 204 aa12.54□□□□□ -0.4
GRAMD1A-207ENST00000598118 ERC2-IT1O76042 136 aa12.53□□□□□ -0.4
GRAMD1A-207ENST00000598118 C20orf197Q8N268 126 aa12.52□□□□□ -0.41
GRAMD1A-207ENST00000598118 BCE1O60756 84 aa12.51□□□□□ -0.41
GRAMD1A-207ENST00000598118 Q8N9L7 120 aa12.51□□□□□ -0.41
GRAMD1A-207ENST00000598118 TRAV7A0A075B6U4 112 aa12.51□□□□□ -0.41
GRAMD1A-207ENST00000598118 TMEM258P61165 79 aa12.51□□□□□ -0.41
GRAMD1A-207ENST00000598118 TNP2Q05952 138 aa12.49□□□□□ -0.41
GRAMD1A-207ENST00000598118 NREPQ16612 68 aa12.49□□□□□ -0.41
GRAMD1A-207ENST00000598118 A0A1W2PNM2 257 aa12.47□□□□□ -0.41
GRAMD1A-207ENST00000598118 SVIPQ8NHG7 77 aa12.46□□□□□ -0.41
GRAMD1A-207ENST00000598118 A0A096LNI7 61 aa12.46□□□□□ -0.42
GRAMD1A-207ENST00000598118 IGKV4-1P06312 121 aa12.45□□□□□ -0.42
GRAMD1A-207ENST00000598118 UBE2BP63146 152 aa12.45□□□□□ -0.42
GRAMD1A-207ENST00000598118 REG3GQ6UW15 175 aa12.45□□□□□ -0.42
GRAMD1A-207ENST00000598118 DPH3Q96FX2 82 aa12.45□□□□□ -0.42
GRAMD1A-207ENST00000598118 C1orf137Q5JT78 98 aa12.44□□□□□ -0.42
GRAMD1A-207ENST00000598118 DNAH7Q8WXX0 4024 aa12.44□□□□□ -0.42
GRAMD1A-207ENST00000598118 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
GRAMD1A-207ENST00000598118 J3KT08 172 aa12.44□□□□□ -0.42
GRAMD1A-207ENST00000598118 BPY2O14599 106 aa12.44□□□□□ -0.42
GRAMD1A-207ENST00000598118 A0A1W2PNN7 141 aa12.42□□□□□ -0.42
GRAMD1A-207ENST00000598118 CSMD3Q7Z407 3707 aa12.41□□□□□ -0.42
GRAMD1A-207ENST00000598118 C16orf90A8MZG2 172 aa12.41□□□□□ -0.42
GRAMD1A-207ENST00000598118 FUSP35637 526 aaKnown RBP eCLIP12.41□□□□□ -0.42
GRAMD1A-207ENST00000598118 RPS28P62857 69 aaKnown RBP12.41□□□□□ -0.42
GRAMD1A-207ENST00000598118 APLNQ9ULZ1 77 aa12.41□□□□□ -0.42
GRAMD1A-207ENST00000598118 DYNC2H1Q8NCM8 4307 aaKnown RBP12.41□□□□□ -0.42
GRAMD1A-207ENST00000598118 CNBPP62633 177 aaKnown RBP12.4□□□□□ -0.42
GRAMD1A-207ENST00000598118 PSCAO43653 123 aa12.4□□□□□ -0.42
GRAMD1A-207ENST00000598118 SMIM29Q86T20 159 aa12.39□□□□□ -0.43
GRAMD1A-207ENST00000598118 Q8NBF4 154 aa12.39□□□□□ -0.43
GRAMD1A-207ENST00000598118 SNURFQ9Y675 71 aa12.39□□□□□ -0.43
GRAMD1A-207ENST00000598118 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.38□□□□□ -0.43
GRAMD1A-207ENST00000598118 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
GRAMD1A-207ENST00000598118 H7BZZ5 65 aa12.37□□□□□ -0.43
GRAMD1A-207ENST00000598118 KLKP1Q107X0 134 aa12.37□□□□□ -0.43
GRAMD1A-207ENST00000598118 TENM2Q9NT68 2774 aa12.37□□□□□ -0.43
GRAMD1A-207ENST00000598118 OXTP01178 125 aa12.37□□□□□ -0.43
GRAMD1A-207ENST00000598118 PRLHP81277 87 aa12.37□□□□□ -0.43
GRAMD1A-207ENST00000598118 SPRR4Q96PI1 79 aa12.35□□□□□ -0.43
GRAMD1A-207ENST00000598118 PLECQ15149 4684 aaKnown RBP12.35□□□□□ -0.43
GRAMD1A-207ENST00000598118 A0A0G2JQZ4 141 aa12.35□□□□□ -0.43
GRAMD1A-207ENST00000598118 A0A1B0GW54 56 aa12.35□□□□□ -0.43
GRAMD1A-207ENST00000598118 CHTF8P0CG12 524 aa12.34□□□□□ -0.43
GRAMD1A-207ENST00000598118 KRTAP11-1Q8IUC1 163 aa12.33□□□□□ -0.44
GRAMD1A-207ENST00000598118 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
GRAMD1A-207ENST00000598118 OCR1Q9BZK8 76 aa12.3□□□□□ -0.44
GRAMD1A-207ENST00000598118 PHF5AQ7RTV0 110 aaKnown RBP12.29□□□□□ -0.44
GRAMD1A-207ENST00000598118 MDFIQ99750 246 aa12.29□□□□□ -0.44
GRAMD1A-207ENST00000598118 HIGD2AQ9BW72 106 aa12.29□□□□□ -0.44
GRAMD1A-207ENST00000598118 FAM236DA0A1B0GTK5 79 aa12.28□□□□□ -0.44
GRAMD1A-207ENST00000598118 FAM236CP0DP71 79 aa12.28□□□□□ -0.44
GRAMD1A-207ENST00000598118 IGFL1Q6UW32 110 aa12.27□□□□□ -0.44
GRAMD1A-207ENST00000598118 DSCR10P59022 87 aa12.27□□□□□ -0.45
GRAMD1A-207ENST00000598118 F8WEM9 126 aa12.26□□□□□ -0.45
GRAMD1A-207ENST00000598118 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
GRAMD1A-207ENST00000598118 LRCOL1A6NCL2 159 aa12.25□□□□□ -0.45
GRAMD1A-207ENST00000598118 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms