RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 H3BUT2 72 aa9.04□□□□□ -0.96
TGFB1-202ENST00000597453 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
TGFB1-202ENST00000597453 TTTY13Q9BZ97 58 aa9.04□□□□□ -0.96
TGFB1-202ENST00000597453 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
TGFB1-202ENST00000597453 A6NJY4 79 aa9.03□□□□□ -0.96
TGFB1-202ENST00000597453 Q8NDZ9 215 aa9.03□□□□□ -0.96
TGFB1-202ENST00000597453 HIST1H4GQ99525 98 aa9.03□□□□□ -0.96
TGFB1-202ENST00000597453 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
TGFB1-202ENST00000597453 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
TGFB1-202ENST00000597453 RPL13AP40429 203 aaKnown RBP9.02□□□□□ -0.97
TGFB1-202ENST00000597453 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
TGFB1-202ENST00000597453 SPCS1Q9Y6A9 102 aa9.01□□□□□ -0.97
TGFB1-202ENST00000597453 BCE1O60756 84 aa9□□□□□ -0.97
TGFB1-202ENST00000597453 NHP2Q9NX24 153 aaKnown RBP9□□□□□ -0.97
TGFB1-202ENST00000597453 MUC2Q02817 5179 aa9□□□□□ -0.97
TGFB1-202ENST00000597453 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
TGFB1-202ENST00000597453 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
TGFB1-202ENST00000597453 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
TGFB1-202ENST00000597453 LOC107984156A0A0G2JMH3 177 aa8.98□□□□□ -0.97
TGFB1-202ENST00000597453 A0A0J9YXY3 114 aa8.98□□□□□ -0.97
TGFB1-202ENST00000597453 K7ERU9 68 aa8.98□□□□□ -0.97
TGFB1-202ENST00000597453 OCIAD2Q56VL3 154 aa8.98□□□□□ -0.97
TGFB1-202ENST00000597453 ARL17AQ8IVW1 177 aa8.98□□□□□ -0.97
TGFB1-202ENST00000597453 DAND5Q8N907 189 aa8.98□□□□□ -0.97
TGFB1-202ENST00000597453 A0A087X002 238 aa8.97□□□□□ -0.97
TGFB1-202ENST00000597453 PRR4Q16378 134 aa8.97□□□□□ -0.97
TGFB1-202ENST00000597453 SCGB1D4Q6XE38 83 aa8.97□□□□□ -0.97
TGFB1-202ENST00000597453 M0R378 163 aa8.96□□□□□ -0.98
TGFB1-202ENST00000597453 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
TGFB1-202ENST00000597453 K7ERJ3 54 aa8.95□□□□□ -0.98
TGFB1-202ENST00000597453 LYRM7Q5U5X0 104 aa8.95□□□□□ -0.98
TGFB1-202ENST00000597453 TMEM126AQ9H061 195 aa8.95□□□□□ -0.98
TGFB1-202ENST00000597453 NCR3O14931 201 aa8.94□□□□□ -0.98
TGFB1-202ENST00000597453 TIMM17BO60830 172 aa8.94□□□□□ -0.98
TGFB1-202ENST00000597453 KRTAP13-1Q8IUC0 172 aa8.94□□□□□ -0.98
TGFB1-202ENST00000597453 TMEM238C9JI98 176 aa8.93□□□□□ -0.98
TGFB1-202ENST00000597453 F8W1H4 67 aa8.93□□□□□ -0.98
TGFB1-202ENST00000597453 TSPAN13O95857 204 aa8.93□□□□□ -0.98
TGFB1-202ENST00000597453 ADAMTSL4-AS1Q5T5F5 129 aa8.93□□□□□ -0.98
TGFB1-202ENST00000597453 LITAFQ99732 161 aa8.93□□□□□ -0.98
TGFB1-202ENST00000597453 UBE2AP49459 152 aa8.92□□□□□ -0.98
TGFB1-202ENST00000597453 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
TGFB1-202ENST00000597453 TRBV10-2A0A0K0K1G8 114 aa8.91□□□□□ -0.98
TGFB1-202ENST00000597453 NDUFC2O95298 119 aa8.91□□□□□ -0.98
TGFB1-202ENST00000597453 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
TGFB1-202ENST00000597453 NAA38Q9BRA0 125 aaKnown RBP8.91□□□□□ -0.98
TGFB1-202ENST00000597453 PRYO14603 147 aa8.9□□□□□ -0.98
TGFB1-202ENST00000597453 CRYGAP11844 174 aa8.9□□□□□ -0.98
TGFB1-202ENST00000597453 EIF4EBP3O60516 100 aaPredicted RBP8.89□□□□□ -0.99
TGFB1-202ENST00000597453 NPC2P61916 151 aa8.89□□□□□ -0.99
TGFB1-202ENST00000597453 FAM19A1Q7Z5A9 133 aa8.89□□□□□ -0.99
TGFB1-202ENST00000597453 TYMSOSQ8TAI1 123 aa8.89□□□□□ -0.99
TGFB1-202ENST00000597453 KCNQ1DNQ9H478 68 aa8.89□□□□□ -0.99
TGFB1-202ENST00000597453 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
TGFB1-202ENST00000597453 TRBV10-3A0A0K0K1G6 114 aa8.88□□□□□ -0.99
TGFB1-202ENST00000597453 PRLHP81277 87 aa8.88□□□□□ -0.99
TGFB1-202ENST00000597453 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
TGFB1-202ENST00000597453 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
TGFB1-202ENST00000597453 SPRR1AP35321 89 aa8.87□□□□□ -0.99
TGFB1-202ENST00000597453 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
TGFB1-202ENST00000597453 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
TGFB1-202ENST00000597453 TRBV20-1A0A075B6N2 111 aa8.86□□□□□ -0.99
TGFB1-202ENST00000597453 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
TGFB1-202ENST00000597453 J3QR89 54 aa8.85□□□□□ -0.99
TGFB1-202ENST00000597453 PRO0461Q9UI25 63 aa8.85□□□□□ -0.99
TGFB1-202ENST00000597453 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
TGFB1-202ENST00000597453 IGLV6-57P01721 117 aa8.84□□□□□ -0.99
TGFB1-202ENST00000597453 CFC1BP0CG36 223 aa8.84□□□□□ -0.99
TGFB1-202ENST00000597453 CFC1P0CG37 223 aa8.84□□□□□ -0.99
TGFB1-202ENST00000597453 VPS25Q9BRG1 176 aa8.84□□□□□ -0.99
TGFB1-202ENST00000597453 PRO1854Q9UHT4 67 aa8.84□□□□□ -0.99
TGFB1-202ENST00000597453 MUC17Q685J3 4493 aa8.84□□□□□ -0.99
TGFB1-202ENST00000597453 IFITM1P13164 125 aa8.83□□□□□ -1
TGFB1-202ENST00000597453 FAM229BQ4G0N7 80 aa8.83□□□□□ -1
TGFB1-202ENST00000597453 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
TGFB1-202ENST00000597453 PPDPFQ9H3Y8 114 aa8.83□□□□□ -1
TGFB1-202ENST00000597453 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
TGFB1-202ENST00000597453 COPS9Q8WXC6 57 aa8.82□□□□□ -1
TGFB1-202ENST00000597453 A4D1N5 150 aa8.81□□□□□ -1
TGFB1-202ENST00000597453 H3BMG7 143 aa8.81□□□□□ -1
TGFB1-202ENST00000597453 RETNLBQ9BQ08 111 aa8.81□□□□□ -1
TGFB1-202ENST00000597453 TRAV23DV6A0A075B6W5 121 aa8.8□□□□□ -1
TGFB1-202ENST00000597453 MUSTN1Q8IVN3 82 aa8.8□□□□□ -1
TGFB1-202ENST00000597453 LINC00304Q8N9R0 145 aa8.8□□□□□ -1
TGFB1-202ENST00000597453 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
TGFB1-202ENST00000597453 FAT4Q6V0I7 4981 aa8.79□□□□□ -1
TGFB1-202ENST00000597453 B5MCH6 92 aa8.78□□□□□ -1
TGFB1-202ENST00000597453 PCP4P48539 62 aa8.77□□□□□ -1.01
TGFB1-202ENST00000597453 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
TGFB1-202ENST00000597453 Q6ZRX8 168 aa8.76□□□□□ -1.01
TGFB1-202ENST00000597453 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
TGFB1-202ENST00000597453 SMCR5Q8TEV8 140 aa8.76□□□□□ -1.01
TGFB1-202ENST00000597453 ZNF706Q9Y5V0 76 aaPredicted RBP8.76□□□□□ -1.01
TGFB1-202ENST00000597453 TCL1BO95988 128 aa8.75□□□□□ -1.01
TGFB1-202ENST00000597453 PSMB2P49721 201 aa8.75□□□□□ -1.01
TGFB1-202ENST00000597453 C3orf22Q8N5N4 141 aa8.75□□□□□ -1.01
TGFB1-202ENST00000597453 SPRR4Q96PI1 79 aa8.75□□□□□ -1.01
TGFB1-202ENST00000597453 ETDBQ3ZM63 59 aa8.74□□□□□ -1.01
TGFB1-202ENST00000597453 SCGB1C2P0DMR2 95 aa8.73□□□□□ -1.01
TGFB1-202ENST00000597453 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms