RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 IGLV6-57P01721 117 aa9.3□□□□□ -0.92
TRIM28-207ENST00000597136 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
TRIM28-207ENST00000597136 RAB37Q96AX2 223 aa9.3□□□□□ -0.92
TRIM28-207ENST00000597136 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
TRIM28-207ENST00000597136 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
TRIM28-207ENST00000597136 TMEM126AQ9H061 195 aa9.29□□□□□ -0.92
TRIM28-207ENST00000597136 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
TRIM28-207ENST00000597136 K7ERJ3 54 aa9.29□□□□□ -0.92
TRIM28-207ENST00000597136 SNHG12Q9BXW3 62 aa9.29□□□□□ -0.92
TRIM28-207ENST00000597136 PRO1854Q9UHT4 67 aa9.28□□□□□ -0.92
TRIM28-207ENST00000597136 RPL13AP40429 203 aaKnown RBP9.27□□□□□ -0.93
TRIM28-207ENST00000597136 UBE2BP63146 152 aa9.27□□□□□ -0.93
TRIM28-207ENST00000597136 KCNQ1DNQ9H478 68 aa9.26□□□□□ -0.93
TRIM28-207ENST00000597136 MYCBP2O75592 4640 aa9.26□□□□□ -0.93
TRIM28-207ENST00000597136 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
TRIM28-207ENST00000597136 H7C2G1 150 aa9.24□□□□□ -0.93
TRIM28-207ENST00000597136 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
TRIM28-207ENST00000597136 PRYO14603 147 aa9.23□□□□□ -0.93
TRIM28-207ENST00000597136 SMIM11BQ8TCY0 68 aa9.23□□□□□ -0.93
TRIM28-207ENST00000597136 CBY1Q9Y3M2 126 aa9.23□□□□□ -0.93
TRIM28-207ENST00000597136 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
TRIM28-207ENST00000597136 REG3GQ6UW15 175 aa9.21□□□□□ -0.93
TRIM28-207ENST00000597136 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
TRIM28-207ENST00000597136 Q1RN00 199 aa9.2□□□□□ -0.94
TRIM28-207ENST00000597136 TSPAN13O95857 204 aa9.2□□□□□ -0.94
TRIM28-207ENST00000597136 SPRR1AP35321 89 aa9.2□□□□□ -0.94
TRIM28-207ENST00000597136 RPL28P46779 137 aaKnown RBP9.19□□□□□ -0.94
TRIM28-207ENST00000597136 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
TRIM28-207ENST00000597136 KRTAP4-16G5E9R7 235 aaPredicted RBP9.18□□□□□ -0.94
TRIM28-207ENST00000597136 C6orf99Q4VX62 202 aa9.18□□□□□ -0.94
TRIM28-207ENST00000597136 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
TRIM28-207ENST00000597136 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
TRIM28-207ENST00000597136 DMBT1Q9UGM3 2413 aaPredicted RBP9.17□□□□□ -0.94
TRIM28-207ENST00000597136 TAX1BP3O14907 124 aa9.16□□□□□ -0.94
TRIM28-207ENST00000597136 BCE1O60756 84 aa9.16□□□□□ -0.94
TRIM28-207ENST00000597136 ETDCA0A1B0GVM5 59 aa9.16□□□□□ -0.94
TRIM28-207ENST00000597136 TRIAP1O43715 76 aa9.16□□□□□ -0.94
TRIM28-207ENST00000597136 FAT3Q8TDW7 4589 aa9.15□□□□□ -0.94
TRIM28-207ENST00000597136 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.95
TRIM28-207ENST00000597136 B5MCH6 92 aa9.14□□□□□ -0.95
TRIM28-207ENST00000597136 IGLV7-43P04211 117 aa9.14□□□□□ -0.95
TRIM28-207ENST00000597136 PSMB2P49721 201 aa9.14□□□□□ -0.95
TRIM28-207ENST00000597136 FAM19A1Q7Z5A9 133 aa9.14□□□□□ -0.95
TRIM28-207ENST00000597136 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
TRIM28-207ENST00000597136 VAMP3Q15836 100 aa9.13□□□□□ -0.95
TRIM28-207ENST00000597136 C9orf118A6NHY6 69 aa9.12□□□□□ -0.95
TRIM28-207ENST00000597136 COX7BP24311 80 aa9.12□□□□□ -0.95
TRIM28-207ENST00000597136 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
TRIM28-207ENST00000597136 Q6ZRX8 168 aa9.12□□□□□ -0.95
TRIM28-207ENST00000597136 H3BUT2 72 aa9.12□□□□□ -0.95
TRIM28-207ENST00000597136 KRTAP13-1Q8IUC0 172 aa9.12□□□□□ -0.95
TRIM28-207ENST00000597136 H0Y9J4 135 aa9.11□□□□□ -0.95
TRIM28-207ENST00000597136 COX6CP09669 75 aa9.11□□□□□ -0.95
TRIM28-207ENST00000597136 UBE2AP49459 152 aa9.11□□□□□ -0.95
TRIM28-207ENST00000597136 PRLHP81277 87 aa9.11□□□□□ -0.95
TRIM28-207ENST00000597136 SPINK6Q6UWN8 80 aa9.11□□□□□ -0.95
TRIM28-207ENST00000597136 H0YGX0 51 aa9.1□□□□□ -0.95
TRIM28-207ENST00000597136 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
TRIM28-207ENST00000597136 Q9BRP9 147 aa9.09□□□□□ -0.95
TRIM28-207ENST00000597136 ZNF861PO60384 105 aa9.08□□□□□ -0.96
TRIM28-207ENST00000597136 KRTAP29-1A8MX34 341 aaPredicted RBP9.07□□□□□ -0.96
TRIM28-207ENST00000597136 LINC00575Q6W349 94 aa9.07□□□□□ -0.96
TRIM28-207ENST00000597136 SMCR5Q8TEV8 140 aa9.07□□□□□ -0.96
TRIM28-207ENST00000597136 CLEC2BQ92478 149 aa9.07□□□□□ -0.96
TRIM28-207ENST00000597136 FAM218AQ96MZ4 157 aa9.07□□□□□ -0.96
TRIM28-207ENST00000597136 DHRS4-AS1Q9P1J3 65 aa9.07□□□□□ -0.96
TRIM28-207ENST00000597136 A0A1W2PPM0 123 aa9.06□□□□□ -0.96
TRIM28-207ENST00000597136 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
TRIM28-207ENST00000597136 OXTP01178 125 aa9.04□□□□□ -0.96
TRIM28-207ENST00000597136 hADV29S1A0JD25 119 aa9.03□□□□□ -0.96
TRIM28-207ENST00000597136 SLC25A20O43772 301 aa9.03□□□□□ -0.96
TRIM28-207ENST00000597136 ERC2-IT1O76042 136 aa9.03□□□□□ -0.96
TRIM28-207ENST00000597136 FABP2P12104 132 aa9.03□□□□□ -0.96
TRIM28-207ENST00000597136 LYRM7Q5U5X0 104 aa9.03□□□□□ -0.96
TRIM28-207ENST00000597136 J3QL48 77 aa9.02□□□□□ -0.97
TRIM28-207ENST00000597136 A0A1B0GX51 115 aa9.01□□□□□ -0.97
TRIM28-207ENST00000597136 LST1O00453 97 aa9.01□□□□□ -0.97
TRIM28-207ENST00000597136 TCL1BO95988 128 aa9.01□□□□□ -0.97
TRIM28-207ENST00000597136 MT1HL1P0DM35 61 aa9.01□□□□□ -0.97
TRIM28-207ENST00000597136 SNCGO76070 127 aa9□□□□□ -0.97
TRIM28-207ENST00000597136 LINC01600Q96MT4 127 aa9□□□□□ -0.97
TRIM28-207ENST00000597136 TNXBP22105 4242 aa9□□□□□ -0.97
TRIM28-207ENST00000597136 HERC1Q15751 4861 aa8.99□□□□□ -0.97
TRIM28-207ENST00000597136 TRBV20-1A0A075B6N2 111 aa8.99□□□□□ -0.97
TRIM28-207ENST00000597136 ATXN8Q156A1 80 aa8.99□□□□□ -0.97
TRIM28-207ENST00000597136 TRACP01848 142 aa8.98□□□□□ -0.97
TRIM28-207ENST00000597136 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
TRIM28-207ENST00000597136 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
TRIM28-207ENST00000597136 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
TRIM28-207ENST00000597136 Q6ZQY7 126 aa8.97□□□□□ -0.97
TRIM28-207ENST00000597136 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
TRIM28-207ENST00000597136 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
TRIM28-207ENST00000597136 DNAL4O96015 105 aa8.95□□□□□ -0.98
TRIM28-207ENST00000597136 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
TRIM28-207ENST00000597136 A0A1B0GV90 55 aa8.94□□□□□ -0.98
TRIM28-207ENST00000597136 PRR26Q8N8Z3 221 aa8.94□□□□□ -0.98
TRIM28-207ENST00000597136 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
TRIM28-207ENST00000597136 ZNF706Q9Y5V0 76 aaPredicted RBP8.94□□□□□ -0.98
TRIM28-207ENST00000597136 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
TRIM28-207ENST00000597136 H3BMG7 143 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms