RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ST20-AS1Q8NBB2 130 aa5.81□□□□□ -1.48
CHMP2A-202ENST00000596708 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
CHMP2A-202ENST00000596708 ZNF73O43830 326 aaPredicted RBP5.8□□□□□ -1.48
CHMP2A-202ENST00000596708 NMUP48645 174 aa5.8□□□□□ -1.48
CHMP2A-202ENST00000596708 HRCT1Q6UXD1 115 aa5.8□□□□□ -1.48
CHMP2A-202ENST00000596708 PLNP26678 52 aa5.79□□□□□ -1.48
CHMP2A-202ENST00000596708 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
CHMP2A-202ENST00000596708 IGLV8-61A0A075B6I0 122 aa5.78□□□□□ -1.48
CHMP2A-202ENST00000596708 C9orf92A6NGG3 77 aa5.78□□□□□ -1.48
CHMP2A-202ENST00000596708 DPM2O94777 84 aa5.78□□□□□ -1.48
CHMP2A-202ENST00000596708 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
CHMP2A-202ENST00000596708 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
CHMP2A-202ENST00000596708 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
CHMP2A-202ENST00000596708 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
CHMP2A-202ENST00000596708 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
CHMP2A-202ENST00000596708 IGKCP01834 107 aa5.77□□□□□ -1.49
CHMP2A-202ENST00000596708 FABP4P15090 132 aa5.77□□□□□ -1.49
CHMP2A-202ENST00000596708 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
CHMP2A-202ENST00000596708 CBY1Q9Y3M2 126 aa5.77□□□□□ -1.49
CHMP2A-202ENST00000596708 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
CHMP2A-202ENST00000596708 SERF1AO75920 110 aa5.76□□□□□ -1.49
CHMP2A-202ENST00000596708 ADAMTSL4-AS1Q5T5F5 129 aa5.76□□□□□ -1.49
CHMP2A-202ENST00000596708 SLC25A34Q6PIV7 304 aa5.76□□□□□ -1.49
CHMP2A-202ENST00000596708 OR13C6PQ8NH95 151 aa5.76□□□□□ -1.49
CHMP2A-202ENST00000596708 LAMTOR3Q9UHA4 124 aa5.76□□□□□ -1.49
CHMP2A-202ENST00000596708 HSPB8Q9UJY1 196 aa5.76□□□□□ -1.49
CHMP2A-202ENST00000596708 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
CHMP2A-202ENST00000596708 TRGC2P03986 189 aa5.75□□□□□ -1.49
CHMP2A-202ENST00000596708 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
CHMP2A-202ENST00000596708 SPRR1BP22528 89 aa5.74□□□□□ -1.49
CHMP2A-202ENST00000596708 MT1HP80294 61 aa5.74□□□□□ -1.49
CHMP2A-202ENST00000596708 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
CHMP2A-202ENST00000596708 CFC1BP0CG36 223 aa5.73□□□□□ -1.49
CHMP2A-202ENST00000596708 LINC00310P59036 64 aa5.73□□□□□ -1.49
CHMP2A-202ENST00000596708 DHRS4-AS1Q9P1J3 65 aa5.73□□□□□ -1.49
CHMP2A-202ENST00000596708 TAL2Q16559 108 aa5.72□□□□□ -1.49
CHMP2A-202ENST00000596708 DEFB105AQ8NG35 78 aa5.72□□□□□ -1.49
CHMP2A-202ENST00000596708 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
CHMP2A-202ENST00000596708 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
CHMP2A-202ENST00000596708 E9PLD3 99 aa5.71□□□□□ -1.5
CHMP2A-202ENST00000596708 H7C2G1 150 aa5.71□□□□□ -1.5
CHMP2A-202ENST00000596708 Q1RN00 199 aa5.71□□□□□ -1.5
CHMP2A-202ENST00000596708 COX7BP24311 80 aa5.7□□□□□ -1.5
CHMP2A-202ENST00000596708 PRO1933Q9H354 126 aa5.7□□□□□ -1.5
CHMP2A-202ENST00000596708 M0R2T5 61 aa5.69□□□□□ -1.5
CHMP2A-202ENST00000596708 CD164Q04900 197 aa5.69□□□□□ -1.5
CHMP2A-202ENST00000596708 SPANXDQ9BXN6 97 aa5.69□□□□□ -1.5
CHMP2A-202ENST00000596708 TEX49A0A1B0GTD5 131 aa5.68□□□□□ -1.5
CHMP2A-202ENST00000596708 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
CHMP2A-202ENST00000596708 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
CHMP2A-202ENST00000596708 LITAFQ99732 161 aa5.68□□□□□ -1.5
CHMP2A-202ENST00000596708 TIMM17BO60830 172 aa5.67□□□□□ -1.5
CHMP2A-202ENST00000596708 AKR1D1P51857 326 aa5.67□□□□□ -1.5
CHMP2A-202ENST00000596708 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
CHMP2A-202ENST00000596708 LINC00518Q8N0U6 118 aa5.67□□□□□ -1.5
CHMP2A-202ENST00000596708 ZNF815PA8K554 130 aa5.66□□□□□ -1.5
CHMP2A-202ENST00000596708 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
CHMP2A-202ENST00000596708 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
CHMP2A-202ENST00000596708 SYS1-DBNDD2H3BUS1 97 aa5.65□□□□□ -1.5
CHMP2A-202ENST00000596708 C1orf195Q5TG92 126 aa5.65□□□□□ -1.5
CHMP2A-202ENST00000596708 A0A0G2JQZ4 141 aa5.64□□□□□ -1.51
CHMP2A-202ENST00000596708 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
CHMP2A-202ENST00000596708 Q5XG85 94 aa5.64□□□□□ -1.51
CHMP2A-202ENST00000596708 SMIM29Q86T20 159 aa5.64□□□□□ -1.51
CHMP2A-202ENST00000596708 TTTY13Q9BZ97 58 aa5.64□□□□□ -1.51
CHMP2A-202ENST00000596708 A0A1B0GWB2 263 aa5.62□□□□□ -1.51
CHMP2A-202ENST00000596708 TRBV7-6A0A0J9YX20 115 aa5.61□□□□□ -1.51
CHMP2A-202ENST00000596708 A6NDN8 102 aa5.61□□□□□ -1.51
CHMP2A-202ENST00000596708 COLCA2A8K830 154 aa5.61□□□□□ -1.51
CHMP2A-202ENST00000596708 TCL1BO95988 128 aa5.61□□□□□ -1.51
CHMP2A-202ENST00000596708 LINC01545Q5VT33 79 aa5.61□□□□□ -1.51
CHMP2A-202ENST00000596708 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
CHMP2A-202ENST00000596708 SCGB1D4Q6XE38 83 aa5.61□□□□□ -1.51
CHMP2A-202ENST00000596708 IGLV5-48A0A075B6I7 105 aa5.6□□□□□ -1.51
CHMP2A-202ENST00000596708 COPS9Q8WXC6 57 aa5.59□□□□□ -1.51
CHMP2A-202ENST00000596708 NHP2Q9NX24 153 aaKnown RBP5.58□□□□□ -1.52
CHMP2A-202ENST00000596708 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
CHMP2A-202ENST00000596708 A4D1N5 150 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 F8WEM9 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BKO60814 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BJP06899 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 IFITM1P13164 125 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BOP23527 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BBP33778 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BDP58876 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BCP62807 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST2H2BEQ16778 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 Q6Q795 121 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 MUSTN1Q8IVN3 82 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BHQ93079 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BNQ99877 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 HIST1H2BMQ99879 126 aa5.57□□□□□ -1.52
CHMP2A-202ENST00000596708 C3orf79P0CE67 100 aa5.56□□□□□ -1.52
CHMP2A-202ENST00000596708 PCP2Q8IVA1 136 aa5.56□□□□□ -1.52
CHMP2A-202ENST00000596708 KRTDAPP60985 99 aa5.55□□□□□ -1.52
CHMP2A-202ENST00000596708 Q6ZVH6 145 aa5.55□□□□□ -1.52
CHMP2A-202ENST00000596708 TRAV13-2A0A0B4J235 113 aa5.54□□□□□ -1.52
CHMP2A-202ENST00000596708 SLC7A5P1Q8MH63 180 aa5.54□□□□□ -1.52
CHMP2A-202ENST00000596708 SMIM11BQ8TCY0 68 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms