RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
LIG1-209ENST00000596104 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
LIG1-209ENST00000596104 HRCT1Q6UXD1 115 aa5.34□□□□□ -1.55
LIG1-209ENST00000596104 COMMD7Q86VX2 200 aa5.34□□□□□ -1.55
LIG1-209ENST00000596104 MIEN1Q9BRT3 115 aa5.34□□□□□ -1.55
LIG1-209ENST00000596104 J3QQQ9 107 aa5.33□□□□□ -1.56
LIG1-209ENST00000596104 M0R2T5 61 aa5.32□□□□□ -1.56
LIG1-209ENST00000596104 H0Y8G0 127 aa5.31□□□□□ -1.56
LIG1-209ENST00000596104 HSBP1O75506 76 aa5.31□□□□□ -1.56
LIG1-209ENST00000596104 NMUP48645 174 aa5.31□□□□□ -1.56
LIG1-209ENST00000596104 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
LIG1-209ENST00000596104 SLC25A34Q6PIV7 304 aa5.31□□□□□ -1.56
LIG1-209ENST00000596104 YPEL4Q96NS1 127 aa5.31□□□□□ -1.56
LIG1-209ENST00000596104 RPL37P61927 97 aaKnown RBP5.3□□□□□ -1.56
LIG1-209ENST00000596104 CD164Q04900 197 aa5.3□□□□□ -1.56
LIG1-209ENST00000596104 LAMTOR3Q9UHA4 124 aa5.3□□□□□ -1.56
LIG1-209ENST00000596104 LGALS3P17931 250 aaKnown RBP5.29□□□□□ -1.56
LIG1-209ENST00000596104 PLNP26678 52 aa5.29□□□□□ -1.56
LIG1-209ENST00000596104 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
LIG1-209ENST00000596104 NPC2P61916 151 aa5.29□□□□□ -1.56
LIG1-209ENST00000596104 Q5XG85 94 aa5.29□□□□□ -1.56
LIG1-209ENST00000596104 DHRS4-AS1Q9P1J3 65 aa5.29□□□□□ -1.56
LIG1-209ENST00000596104 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
LIG1-209ENST00000596104 A0A0J9YXY3 114 aa5.28□□□□□ -1.56
LIG1-209ENST00000596104 DPM2O94777 84 aa5.28□□□□□ -1.56
LIG1-209ENST00000596104 LINC00310P59036 64 aa5.28□□□□□ -1.56
LIG1-209ENST00000596104 HERVK_113P61574 105 aa5.28□□□□□ -1.56
LIG1-209ENST00000596104 C1orf195Q5TG92 126 aa5.28□□□□□ -1.56
LIG1-209ENST00000596104 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
LIG1-209ENST00000596104 CBY1Q9Y3M2 126 aa5.28□□□□□ -1.56
LIG1-209ENST00000596104 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
LIG1-209ENST00000596104 APOC3P02656 99 aa5.27□□□□□ -1.57
LIG1-209ENST00000596104 PMCHL2Q9BQD1 86 aa5.27□□□□□ -1.57
LIG1-209ENST00000596104 PRO1933Q9H354 126 aa5.27□□□□□ -1.57
LIG1-209ENST00000596104 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
LIG1-209ENST00000596104 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
LIG1-209ENST00000596104 H7C2G1 150 aa5.26□□□□□ -1.57
LIG1-209ENST00000596104 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
LIG1-209ENST00000596104 Q1RN00 199 aa5.26□□□□□ -1.57
LIG1-209ENST00000596104 LITAFQ99732 161 aa5.26□□□□□ -1.57
LIG1-209ENST00000596104 SNAPINO95295 136 aa5.25□□□□□ -1.57
LIG1-209ENST00000596104 IGKCP01834 107 aa5.25□□□□□ -1.57
LIG1-209ENST00000596104 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
LIG1-209ENST00000596104 SVBPQ8N300 66 aa5.25□□□□□ -1.57
LIG1-209ENST00000596104 OR13C6PQ8NH95 151 aa5.25□□□□□ -1.57
LIG1-209ENST00000596104 LINC00308Q8TCZ7 52 aa5.25□□□□□ -1.57
LIG1-209ENST00000596104 SPANXCQ9NY87 97 aa5.25□□□□□ -1.57
LIG1-209ENST00000596104 E9PLD3 99 aa5.24□□□□□ -1.57
LIG1-209ENST00000596104 SERF1AO75920 110 aa5.24□□□□□ -1.57
LIG1-209ENST00000596104 COX7BP24311 80 aa5.24□□□□□ -1.57
LIG1-209ENST00000596104 TAL2Q16559 108 aa5.24□□□□□ -1.57
LIG1-209ENST00000596104 DEFB105AQ8NG35 78 aa5.24□□□□□ -1.57
LIG1-209ENST00000596104 SPANXDQ9BXN6 97 aa5.24□□□□□ -1.57
LIG1-209ENST00000596104 A0A0G2JQZ4 141 aa5.23□□□□□ -1.57
LIG1-209ENST00000596104 TEX49A0A1B0GTD5 131 aa5.23□□□□□ -1.57
LIG1-209ENST00000596104 AKR1D1P51857 326 aa5.23□□□□□ -1.57
LIG1-209ENST00000596104 C6orf99Q4VX62 202 aa5.23□□□□□ -1.57
LIG1-209ENST00000596104 HSPB8Q9UJY1 196 aa5.23□□□□□ -1.57
LIG1-209ENST00000596104 FABP4P15090 132 aa5.22□□□□□ -1.57
LIG1-209ENST00000596104 IGLV5-48A0A075B6I7 105 aa5.21□□□□□ -1.58
LIG1-209ENST00000596104 TIMM17BO60830 172 aa5.21□□□□□ -1.58
LIG1-209ENST00000596104 TRGC2P03986 189 aa5.21□□□□□ -1.58
LIG1-209ENST00000596104 NDUFA5Q16718 116 aa5.21□□□□□ -1.58
LIG1-209ENST00000596104 TRBV7-6A0A0J9YX20 115 aa5.19□□□□□ -1.58
LIG1-209ENST00000596104 LINC00518Q8N0U6 118 aa5.18□□□□□ -1.58
LIG1-209ENST00000596104 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
LIG1-209ENST00000596104 A0A1B0GWB2 263 aa5.16□□□□□ -1.58
LIG1-209ENST00000596104 TCL1BO95988 128 aa5.16□□□□□ -1.58
LIG1-209ENST00000596104 TTTY13Q9BZ97 58 aa5.16□□□□□ -1.58
LIG1-209ENST00000596104 ZNF815PA8K554 130 aa5.15□□□□□ -1.59
LIG1-209ENST00000596104 CFC1P0CG37 223 aa5.15□□□□□ -1.59
LIG1-209ENST00000596104 Q6Q795 121 aa5.15□□□□□ -1.59
LIG1-209ENST00000596104 USH2AO75445 5202 aa5.14□□□□□ -1.59
LIG1-209ENST00000596104 SYS1-DBNDD2H3BUS1 97 aa5.14□□□□□ -1.59
LIG1-209ENST00000596104 Q75L30 129 aa5.14□□□□□ -1.59
LIG1-209ENST00000596104 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
LIG1-209ENST00000596104 LINC01545Q5VT33 79 aa5.13□□□□□ -1.59
LIG1-209ENST00000596104 ATP11AUNQ6ZP68 121 aa5.12□□□□□ -1.59
LIG1-209ENST00000596104 OBSCN-AS1Q96MR7 158 aa5.12□□□□□ -1.59
LIG1-209ENST00000596104 A4D1N5 150 aa5.11□□□□□ -1.59
LIG1-209ENST00000596104 A6NDN8 102 aa5.11□□□□□ -1.59
LIG1-209ENST00000596104 PCP2Q8IVA1 136 aa5.11□□□□□ -1.59
LIG1-209ENST00000596104 NHP2Q9NX24 153 aaKnown RBP5.1□□□□□ -1.59
LIG1-209ENST00000596104 TRBV7-7A0A0K0K1E9 115 aa5.09□□□□□ -1.59
LIG1-209ENST00000596104 COLCA2A8K830 154 aa5.09□□□□□ -1.59
LIG1-209ENST00000596104 IFITM1P13164 125 aa5.09□□□□□ -1.59
LIG1-209ENST00000596104 PET117Q6UWS5 81 aa5.09□□□□□ -1.59
LIG1-209ENST00000596104 SMIM11BQ8TCY0 68 aa5.09□□□□□ -1.59
LIG1-209ENST00000596104 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.6
LIG1-209ENST00000596104 C20orf202A1L168 122 aa5.08□□□□□ -1.6
LIG1-209ENST00000596104 F8WEM9 126 aa5.08□□□□□ -1.6
LIG1-209ENST00000596104 CLEC2BQ92478 149 aa5.08□□□□□ -1.6
LIG1-209ENST00000596104 MT2AP02795 61 aa5.07□□□□□ -1.6
LIG1-209ENST00000596104 Q6JHZ5 121 aa5.07□□□□□ -1.6
LIG1-209ENST00000596104 IGFL1Q6UW32 110 aa5.07□□□□□ -1.6
LIG1-209ENST00000596104 SCGB1D4Q6XE38 83 aa5.07□□□□□ -1.6
LIG1-209ENST00000596104 MUSTN1Q8IVN3 82 aa5.07□□□□□ -1.6
LIG1-209ENST00000596104 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
LIG1-209ENST00000596104 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
LIG1-209ENST00000596104 LCE2BO14633 110 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms