RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 DDTP30046 118 aa7.56□□□□□ -1.2
APOC1-209ENST00000592885 RPS29P62273 56 aaKnown RBP7.56□□□□□ -1.2
APOC1-209ENST00000592885 MIEN1Q9BRT3 115 aa7.56□□□□□ -1.2
APOC1-209ENST00000592885 DPM2O94777 84 aa7.55□□□□□ -1.2
APOC1-209ENST00000592885 NDUFC2O95298 119 aa7.55□□□□□ -1.2
APOC1-209ENST00000592885 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
APOC1-209ENST00000592885 Q6ZRX8 168 aa7.54□□□□□ -1.2
APOC1-209ENST00000592885 DAND5Q8N907 189 aa7.54□□□□□ -1.2
APOC1-209ENST00000592885 IGKCP01834 107 aa7.53□□□□□ -1.2
APOC1-209ENST00000592885 LGALS3P17931 250 aaKnown RBP7.53□□□□□ -1.2
APOC1-209ENST00000592885 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
APOC1-209ENST00000592885 FABP4P15090 132 aa7.52□□□□□ -1.21
APOC1-209ENST00000592885 JOSD1Q15040 202 aaPredicted RBP7.52□□□□□ -1.21
APOC1-209ENST00000592885 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
APOC1-209ENST00000592885 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
APOC1-209ENST00000592885 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
APOC1-209ENST00000592885 S100A7L2Q5SY68 101 aa7.51□□□□□ -1.21
APOC1-209ENST00000592885 Q9BRP9 147 aa7.51□□□□□ -1.21
APOC1-209ENST00000592885 CBY1Q9Y3M2 126 aa7.51□□□□□ -1.21
APOC1-209ENST00000592885 TRAV23DV6A0A075B6W5 121 aa7.5□□□□□ -1.21
APOC1-209ENST00000592885 ERC2-IT1O76042 136 aa7.5□□□□□ -1.21
APOC1-209ENST00000592885 AKR1D1P51857 326 aa7.5□□□□□ -1.21
APOC1-209ENST00000592885 MOBPQ13875 183 aa7.5□□□□□ -1.21
APOC1-209ENST00000592885 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
APOC1-209ENST00000592885 IGLV9-49A0A0B4J1Y8 123 aa7.49□□□□□ -1.21
APOC1-209ENST00000592885 PMCHL2Q9BQD1 86 aa7.49□□□□□ -1.21
APOC1-209ENST00000592885 E9PLD3 99 aa7.48□□□□□ -1.21
APOC1-209ENST00000592885 A0A0J9YXY3 114 aa7.47□□□□□ -1.21
APOC1-209ENST00000592885 SLC25A20O43772 301 aa7.47□□□□□ -1.21
APOC1-209ENST00000592885 ZNF73O43830 326 aaPredicted RBP7.47□□□□□ -1.21
APOC1-209ENST00000592885 ASB16-AS1Q495Z4 193 aa7.47□□□□□ -1.21
APOC1-209ENST00000592885 Q8N377 158 aa7.47□□□□□ -1.21
APOC1-209ENST00000592885 A6NJY4 79 aa7.46□□□□□ -1.22
APOC1-209ENST00000592885 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.22
APOC1-209ENST00000592885 SMIM6P0DI80 62 aa7.45□□□□□ -1.22
APOC1-209ENST00000592885 HINT1P49773 126 aaPredicted RBP7.45□□□□□ -1.22
APOC1-209ENST00000592885 SOSTDC1Q6X4U4 206 aa7.45□□□□□ -1.22
APOC1-209ENST00000592885 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
APOC1-209ENST00000592885 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
APOC1-209ENST00000592885 C9orf153Q5TBE3 101 aa7.44□□□□□ -1.22
APOC1-209ENST00000592885 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
APOC1-209ENST00000592885 TIMM17BO60830 172 aa7.43□□□□□ -1.22
APOC1-209ENST00000592885 C3orf79P0CE67 100 aa7.43□□□□□ -1.22
APOC1-209ENST00000592885 KRTDAPP60985 99 aa7.43□□□□□ -1.22
APOC1-209ENST00000592885 NPC2P61916 151 aa7.43□□□□□ -1.22
APOC1-209ENST00000592885 PYY3Q5JQD4 70 aa7.43□□□□□ -1.22
APOC1-209ENST00000592885 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
APOC1-209ENST00000592885 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
APOC1-209ENST00000592885 SLC25A34Q6PIV7 304 aa7.42□□□□□ -1.22
APOC1-209ENST00000592885 LINC00518Q8N0U6 118 aa7.42□□□□□ -1.22
APOC1-209ENST00000592885 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
APOC1-209ENST00000592885 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
APOC1-209ENST00000592885 LITAFQ99732 161 aa7.41□□□□□ -1.22
APOC1-209ENST00000592885 SPANXDQ9BXN6 97 aa7.41□□□□□ -1.22
APOC1-209ENST00000592885 SPRR1BP22528 89 aa7.4□□□□□ -1.22
APOC1-209ENST00000592885 LINC01545Q5VT33 79 aa7.4□□□□□ -1.22
APOC1-209ENST00000592885 PET117Q6UWS5 81 aa7.4□□□□□ -1.22
APOC1-209ENST00000592885 DHRS4-AS1Q9P1J3 65 aa7.4□□□□□ -1.22
APOC1-209ENST00000592885 SCGB1D1O95968 90 aa7.39□□□□□ -1.23
APOC1-209ENST00000592885 XP32Q5T750 250 aa7.39□□□□□ -1.23
APOC1-209ENST00000592885 ST20-AS1Q8NBB2 130 aa7.39□□□□□ -1.23
APOC1-209ENST00000592885 C12orf57Q99622 126 aa7.39□□□□□ -1.23
APOC1-209ENST00000592885 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
APOC1-209ENST00000592885 C20orf202A1L168 122 aa7.38□□□□□ -1.23
APOC1-209ENST00000592885 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
APOC1-209ENST00000592885 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
APOC1-209ENST00000592885 ELOF1P60002 83 aaKnown RBP7.36□□□□□ -1.23
APOC1-209ENST00000592885 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
APOC1-209ENST00000592885 LAMTOR3Q9UHA4 124 aa7.35□□□□□ -1.23
APOC1-209ENST00000592885 COX7BP24311 80 aa7.34□□□□□ -1.23
APOC1-209ENST00000592885 COPS9Q8WXC6 57 aa7.34□□□□□ -1.23
APOC1-209ENST00000592885 TRBV7-6A0A0J9YX20 115 aa7.33□□□□□ -1.24
APOC1-209ENST00000592885 KRTAP4-1Q9BYQ7 146 aa7.33□□□□□ -1.24
APOC1-209ENST00000592885 CD164Q04900 197 aa7.32□□□□□ -1.24
APOC1-209ENST00000592885 C6orf99Q4VX62 202 aa7.32□□□□□ -1.24
APOC1-209ENST00000592885 VAMP8Q9BV40 100 aa7.31□□□□□ -1.24
APOC1-209ENST00000592885 IFITM1P13164 125 aa7.3□□□□□ -1.24
APOC1-209ENST00000592885 SCGB1D4Q6XE38 83 aa7.3□□□□□ -1.24
APOC1-209ENST00000592885 Q6ZVH6 145 aa7.3□□□□□ -1.24
APOC1-209ENST00000592885 ATOH7Q8N100 152 aa7.3□□□□□ -1.24
APOC1-209ENST00000592885 TTTY13Q9BZ97 58 aa7.3□□□□□ -1.24
APOC1-209ENST00000592885 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
APOC1-209ENST00000592885 A0A1B0GWB2 263 aa7.29□□□□□ -1.24
APOC1-209ENST00000592885 PRO1933Q9H354 126 aa7.29□□□□□ -1.24
APOC1-209ENST00000592885 TAL2Q16559 108 aa7.28□□□□□ -1.24
APOC1-209ENST00000592885 PAM16Q9Y3D7 125 aa7.28□□□□□ -1.24
APOC1-209ENST00000592885 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
APOC1-209ENST00000592885 SPATA45Q537H7 98 aa7.27□□□□□ -1.25
APOC1-209ENST00000592885 Q5XG85 94 aa7.27□□□□□ -1.25
APOC1-209ENST00000592885 HRCT1Q6UXD1 115 aa7.27□□□□□ -1.25
APOC1-209ENST00000592885 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
APOC1-209ENST00000592885 A4D1N5 150 aa7.26□□□□□ -1.25
APOC1-209ENST00000592885 Q1RN00 199 aa7.26□□□□□ -1.25
APOC1-209ENST00000592885 IGLV5-48A0A075B6I7 105 aa7.25□□□□□ -1.25
APOC1-209ENST00000592885 H7C2G1 150 aa7.25□□□□□ -1.25
APOC1-209ENST00000592885 DEFB105AQ8NG35 78 aa7.25□□□□□ -1.25
APOC1-209ENST00000592885 NHP2Q9NX24 153 aaKnown RBP7.25□□□□□ -1.25
APOC1-209ENST00000592885 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
APOC1-209ENST00000592885 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
APOC1-209ENST00000592885 A6NDN8 102 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms