RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 ARL17AQ8IVW1 177 aa12.28□□□□□ -0.44
CIRBP-222ENST00000589235 IGKCP01834 107 aa12.27□□□□□ -0.45
CIRBP-222ENST00000589235 CDIP1Q9H305 208 aa12.27□□□□□ -0.45
CIRBP-222ENST00000589235 TRBV10-2A0A0K0K1G8 114 aa12.26□□□□□ -0.45
CIRBP-222ENST00000589235 TPRXLQ17RH7 258 aa12.26□□□□□ -0.45
CIRBP-222ENST00000589235 KRTAP4-16G5E9R7 235 aaPredicted RBP12.25□□□□□ -0.45
CIRBP-222ENST00000589235 TSPEAR-AS2P59090 65 aa12.25□□□□□ -0.45
CIRBP-222ENST00000589235 LINC01545Q5VT33 79 aa12.25□□□□□ -0.45
CIRBP-222ENST00000589235 PAM16Q9Y3D7 125 aa12.25□□□□□ -0.45
CIRBP-222ENST00000589235 DAND5Q8N907 189 aa12.24□□□□□ -0.45
CIRBP-222ENST00000589235 SPATA45Q537H7 98 aa12.23□□□□□ -0.45
CIRBP-222ENST00000589235 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
CIRBP-222ENST00000589235 S100A7L2Q5SY68 101 aa12.22□□□□□ -0.45
CIRBP-222ENST00000589235 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
CIRBP-222ENST00000589235 PMCHL2Q9BQD1 86 aa12.22□□□□□ -0.45
CIRBP-222ENST00000589235 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
CIRBP-222ENST00000589235 B5MCH6 92 aa12.21□□□□□ -0.45
CIRBP-222ENST00000589235 NDUFC2O95298 119 aa12.21□□□□□ -0.45
CIRBP-222ENST00000589235 Q8NBF4 154 aa12.2□□□□□ -0.46
CIRBP-222ENST00000589235 UQCR10Q9UDW1 63 aa12.2□□□□□ -0.46
CIRBP-222ENST00000589235 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
CIRBP-222ENST00000589235 GAGE2AQ6NT46 116 aa12.19□□□□□ -0.46
CIRBP-222ENST00000589235 FP248Q71RG6 208 aaPredicted RBP12.19□□□□□ -0.46
CIRBP-222ENST00000589235 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
CIRBP-222ENST00000589235 SPINK1P00995 79 aa12.18□□□□□ -0.46
CIRBP-222ENST00000589235 CBY1Q9Y3M2 126 aa12.18□□□□□ -0.46
CIRBP-222ENST00000589235 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
CIRBP-222ENST00000589235 E9PLD3 99 aa12.15□□□□□ -0.46
CIRBP-222ENST00000589235 IGLV6-57P01721 117 aa12.15□□□□□ -0.46
CIRBP-222ENST00000589235 Q6ZRX8 168 aa12.15□□□□□ -0.46
CIRBP-222ENST00000589235 SSBP3-AS1Q7Z2R9 100 aa12.15□□□□□ -0.46
CIRBP-222ENST00000589235 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
CIRBP-222ENST00000589235 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
CIRBP-222ENST00000589235 MUC2Q02817 5179 aa12.14□□□□□ -0.47
CIRBP-222ENST00000589235 M0R143 59 aa12.13□□□□□ -0.47
CIRBP-222ENST00000589235 HINT1P49773 126 aaPredicted RBP12.13□□□□□ -0.47
CIRBP-222ENST00000589235 IGLV9-49A0A0B4J1Y8 123 aa12.12□□□□□ -0.47
CIRBP-222ENST00000589235 ERC2-IT1O76042 136 aa12.11□□□□□ -0.47
CIRBP-222ENST00000589235 NPC2P61916 151 aa12.11□□□□□ -0.47
CIRBP-222ENST00000589235 MOBPQ13875 183 aa12.1□□□□□ -0.47
CIRBP-222ENST00000589235 Q9BRP9 147 aa12.1□□□□□ -0.47
CIRBP-222ENST00000589235 ZNF73O43830 326 aaPredicted RBP12.09□□□□□ -0.47
CIRBP-222ENST00000589235 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
CIRBP-222ENST00000589235 RPS29P62273 56 aaKnown RBP12.08□□□□□ -0.48
CIRBP-222ENST00000589235 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
CIRBP-222ENST00000589235 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
CIRBP-222ENST00000589235 SNHG12Q9BXW3 62 aa12.07□□□□□ -0.48
CIRBP-222ENST00000589235 SPANXCQ9NY87 97 aa12.06□□□□□ -0.48
CIRBP-222ENST00000589235 TIMM17BO60830 172 aa12.05□□□□□ -0.48
CIRBP-222ENST00000589235 COX8AP10176 69 aa12.05□□□□□ -0.48
CIRBP-222ENST00000589235 OR13C6PQ8NH95 151 aa12.04□□□□□ -0.48
CIRBP-222ENST00000589235 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
CIRBP-222ENST00000589235 DLEU1O43261 78 aa12.03□□□□□ -0.48
CIRBP-222ENST00000589235 C9orf153Q5TBE3 101 aa12.03□□□□□ -0.48
CIRBP-222ENST00000589235 SLC25A20O43772 301 aa12.02□□□□□ -0.49
CIRBP-222ENST00000589235 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
CIRBP-222ENST00000589235 ZNF815PA8K554 130 aa12.01□□□□□ -0.49
CIRBP-222ENST00000589235 KRTAP13-3Q3SY46 172 aa12.01□□□□□ -0.49
CIRBP-222ENST00000589235 ANKRD39Q53RE8 183 aa12□□□□□ -0.49
CIRBP-222ENST00000589235 LITAFQ99732 161 aa11.99□□□□□ -0.49
CIRBP-222ENST00000589235 SPANXDQ9BXN6 97 aa11.99□□□□□ -0.49
CIRBP-222ENST00000589235 DHRS4-AS1Q9P1J3 65 aa11.99□□□□□ -0.49
CIRBP-222ENST00000589235 Q8N377 158 aa11.98□□□□□ -0.49
CIRBP-222ENST00000589235 COL5A1-AS1Q5SY13 56 aa11.96□□□□□ -0.49
CIRBP-222ENST00000589235 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.49
CIRBP-222ENST00000589235 COPS9Q8WXC6 57 aa11.95□□□□□ -0.5
CIRBP-222ENST00000589235 SEC61BP60468 96 aaKnown RBP11.93□□□□□ -0.5
CIRBP-222ENST00000589235 SCGB1D4Q6XE38 83 aa11.93□□□□□ -0.5
CIRBP-222ENST00000589235 MUC17Q685J3 4493 aa11.92□□□□□ -0.5
CIRBP-222ENST00000589235 ASB16-AS1Q495Z4 193 aa11.92□□□□□ -0.5
CIRBP-222ENST00000589235 LAMTOR3Q9UHA4 124 aa11.92□□□□□ -0.5
CIRBP-222ENST00000589235 A0A1B0GV90 55 aa11.91□□□□□ -0.5
CIRBP-222ENST00000589235 SPRR1BP22528 89 aa11.91□□□□□ -0.5
CIRBP-222ENST00000589235 COX7BP24311 80 aa11.91□□□□□ -0.5
CIRBP-222ENST00000589235 C2orf91Q6ZV80 131 aa11.91□□□□□ -0.5
CIRBP-222ENST00000589235 HIGD1BQ9P298 99 aa11.91□□□□□ -0.5
CIRBP-222ENST00000589235 BATFQ16520 125 aa11.9□□□□□ -0.5
CIRBP-222ENST00000589235 LCE2AQ5TA79 106 aaPredicted RBP11.9□□□□□ -0.5
CIRBP-222ENST00000589235 ELOF1P60002 83 aaKnown RBP11.89□□□□□ -0.51
CIRBP-222ENST00000589235 LIMD2Q9BT23 127 aa11.89□□□□□ -0.51
CIRBP-222ENST00000589235 TTTY13Q9BZ97 58 aa11.89□□□□□ -0.51
CIRBP-222ENST00000589235 C6orf99Q4VX62 202 aa11.88□□□□□ -0.51
CIRBP-222ENST00000589235 BVES-AS1Q5T3Y7 98 aa11.88□□□□□ -0.51
CIRBP-222ENST00000589235 HSD52Q0P140 79 aa11.87□□□□□ -0.51
CIRBP-222ENST00000589235 TAL2Q16559 108 aa11.87□□□□□ -0.51
CIRBP-222ENST00000589235 PCP2Q8IVA1 136 aa11.87□□□□□ -0.51
CIRBP-222ENST00000589235 IFITM1P13164 125 aa11.86□□□□□ -0.51
CIRBP-222ENST00000589235 Q6ZVH6 145 aa11.86□□□□□ -0.51
CIRBP-222ENST00000589235 FAT4Q6V0I7 4981 aa11.86□□□□□ -0.51
CIRBP-222ENST00000589235 TRBV7-6A0A0J9YX20 115 aa11.84□□□□□ -0.51
CIRBP-222ENST00000589235 TEX49A0A1B0GTD5 131 aa11.82□□□□□ -0.52
CIRBP-222ENST00000589235 A6NDN8 102 aa11.82□□□□□ -0.52
CIRBP-222ENST00000589235 DEFB105AQ8NG35 78 aa11.82□□□□□ -0.52
CIRBP-222ENST00000589235 A0A1B0GWB2 263 aa11.81□□□□□ -0.52
CIRBP-222ENST00000589235 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
CIRBP-222ENST00000589235 XP32Q5T750 250 aa11.8□□□□□ -0.52
CIRBP-222ENST00000589235 A4D1N5 150 aa11.78□□□□□ -0.52
CIRBP-222ENST00000589235 CD164Q04900 197 aa11.78□□□□□ -0.52
CIRBP-222ENST00000589235 MUSTN1Q8IVN3 82 aa11.78□□□□□ -0.52
CIRBP-222ENST00000589235 LINC01547P58512 204 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms