RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ZNF73O43830 326 aaPredicted RBP7.8□□□□□ -1.16
ERCC1-205ENST00000587888 FABP4P15090 132 aa7.8□□□□□ -1.16
ERCC1-205ENST00000587888 NMUP48645 174 aa7.8□□□□□ -1.16
ERCC1-205ENST00000587888 HERVK_113P61574 105 aa7.8□□□□□ -1.16
ERCC1-205ENST00000587888 EIF4EBP3O60516 100 aaPredicted RBP7.79□□□□□ -1.16
ERCC1-205ENST00000587888 SERF1AO75920 110 aa7.79□□□□□ -1.16
ERCC1-205ENST00000587888 DPM2O94777 84 aa7.79□□□□□ -1.16
ERCC1-205ENST00000587888 TRGC2P03986 189 aa7.79□□□□□ -1.16
ERCC1-205ENST00000587888 HRCT1Q6UXD1 115 aa7.79□□□□□ -1.16
ERCC1-205ENST00000587888 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
ERCC1-205ENST00000587888 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
ERCC1-205ENST00000587888 IGKCP01834 107 aa7.77□□□□□ -1.17
ERCC1-205ENST00000587888 HINT1P49773 126 aaPredicted RBP7.77□□□□□ -1.17
ERCC1-205ENST00000587888 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.17
ERCC1-205ENST00000587888 LINC00310P59036 64 aa7.76□□□□□ -1.17
ERCC1-205ENST00000587888 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
ERCC1-205ENST00000587888 A0A0J9YXY3 114 aa7.75□□□□□ -1.17
ERCC1-205ENST00000587888 OR13C6PQ8NH95 151 aa7.75□□□□□ -1.17
ERCC1-205ENST00000587888 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
ERCC1-205ENST00000587888 PCOTHQ58A44 107 aa7.74□□□□□ -1.17
ERCC1-205ENST00000587888 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
ERCC1-205ENST00000587888 IGLV8-61A0A075B6I0 122 aa7.73□□□□□ -1.17
ERCC1-205ENST00000587888 C5orf52A6NGY3 159 aa7.73□□□□□ -1.17
ERCC1-205ENST00000587888 LIMD2Q9BT23 127 aa7.72□□□□□ -1.17
ERCC1-205ENST00000587888 CBY1Q9Y3M2 126 aa7.72□□□□□ -1.17
ERCC1-205ENST00000587888 SLC25A34Q6PIV7 304 aa7.71□□□□□ -1.18
ERCC1-205ENST00000587888 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.18
ERCC1-205ENST00000587888 E9PLD3 99 aa7.7□□□□□ -1.18
ERCC1-205ENST00000587888 SPRR1BP22528 89 aa7.7□□□□□ -1.18
ERCC1-205ENST00000587888 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
ERCC1-205ENST00000587888 DEFB105AQ8NG35 78 aa7.7□□□□□ -1.18
ERCC1-205ENST00000587888 LINC00308Q8TCZ7 52 aa7.7□□□□□ -1.18
ERCC1-205ENST00000587888 DHRS4-AS1Q9P1J3 65 aa7.7□□□□□ -1.18
ERCC1-205ENST00000587888 SPANXCQ9NY87 97 aa7.69□□□□□ -1.18
ERCC1-205ENST00000587888 MT1HP80294 61 aa7.68□□□□□ -1.18
ERCC1-205ENST00000587888 TAL2Q16559 108 aa7.68□□□□□ -1.18
ERCC1-205ENST00000587888 COX7BP24311 80 aa7.67□□□□□ -1.18
ERCC1-205ENST00000587888 Q1RN00 199 aa7.67□□□□□ -1.18
ERCC1-205ENST00000587888 LITAFQ99732 161 aa7.67□□□□□ -1.18
ERCC1-205ENST00000587888 H7C2G1 150 aa7.66□□□□□ -1.18
ERCC1-205ENST00000587888 FSIP2Q5CZC0 6907 aa7.66□□□□□ -1.18
ERCC1-205ENST00000587888 C6orf99Q4VX62 202 aa7.64□□□□□ -1.19
ERCC1-205ENST00000587888 SPANXDQ9BXN6 97 aa7.64□□□□□ -1.19
ERCC1-205ENST00000587888 PRO1933Q9H354 126 aa7.64□□□□□ -1.19
ERCC1-205ENST00000587888 TIMM17BO60830 172 aa7.63□□□□□ -1.19
ERCC1-205ENST00000587888 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
ERCC1-205ENST00000587888 ELOF1P60002 83 aaKnown RBP7.63□□□□□ -1.19
ERCC1-205ENST00000587888 TEX49A0A1B0GTD5 131 aa7.62□□□□□ -1.19
ERCC1-205ENST00000587888 ZNF815PA8K554 130 aa7.62□□□□□ -1.19
ERCC1-205ENST00000587888 COLCA2A8K830 154 aa7.62□□□□□ -1.19
ERCC1-205ENST00000587888 SYS1-DBNDD2H3BUS1 97 aa7.62□□□□□ -1.19
ERCC1-205ENST00000587888 CD164Q04900 197 aa7.62□□□□□ -1.19
ERCC1-205ENST00000587888 LINC00518Q8N0U6 118 aa7.62□□□□□ -1.19
ERCC1-205ENST00000587888 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
ERCC1-205ENST00000587888 A0A0G2JQZ4 141 aa7.61□□□□□ -1.19
ERCC1-205ENST00000587888 AKR1D1P51857 326 aa7.61□□□□□ -1.19
ERCC1-205ENST00000587888 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
ERCC1-205ENST00000587888 M0R2T5 61 aa7.58□□□□□ -1.2
ERCC1-205ENST00000587888 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
ERCC1-205ENST00000587888 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
ERCC1-205ENST00000587888 SMIM29Q86T20 159 aa7.58□□□□□ -1.2
ERCC1-205ENST00000587888 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
ERCC1-205ENST00000587888 Q5XG85 94 aa7.56□□□□□ -1.2
ERCC1-205ENST00000587888 PET117Q6UWS5 81 aa7.56□□□□□ -1.2
ERCC1-205ENST00000587888 TRBV7-6A0A0J9YX20 115 aa7.55□□□□□ -1.2
ERCC1-205ENST00000587888 A6NDN8 102 aa7.55□□□□□ -1.2
ERCC1-205ENST00000587888 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
ERCC1-205ENST00000587888 SLC7A5P1Q8MH63 180 aa7.55□□□□□ -1.2
ERCC1-205ENST00000587888 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
ERCC1-205ENST00000587888 RPL37P61927 97 aaKnown RBP7.54□□□□□ -1.2
ERCC1-205ENST00000587888 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
ERCC1-205ENST00000587888 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
ERCC1-205ENST00000587888 C3orf79P0CE67 100 aa7.51□□□□□ -1.21
ERCC1-205ENST00000587888 MUSTN1Q8IVN3 82 aa7.51□□□□□ -1.21
ERCC1-205ENST00000587888 TCL1BO95988 128 aa7.5□□□□□ -1.21
ERCC1-205ENST00000587888 IFITM1P13164 125 aa7.5□□□□□ -1.21
ERCC1-205ENST00000587888 KRTDAPP60985 99 aa7.5□□□□□ -1.21
ERCC1-205ENST00000587888 COPS9Q8WXC6 57 aa7.5□□□□□ -1.21
ERCC1-205ENST00000587888 A4D1N5 150 aa7.48□□□□□ -1.21
ERCC1-205ENST00000587888 S100A1P23297 94 aa7.48□□□□□ -1.21
ERCC1-205ENST00000587888 ANKRD39Q53RE8 183 aa7.47□□□□□ -1.21
ERCC1-205ENST00000587888 SMIM11BQ8TCY0 68 aa7.47□□□□□ -1.21
ERCC1-205ENST00000587888 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
ERCC1-205ENST00000587888 NHP2Q9NX24 153 aaKnown RBP7.46□□□□□ -1.22
ERCC1-205ENST00000587888 TRAV13-2A0A0B4J235 113 aa7.45□□□□□ -1.22
ERCC1-205ENST00000587888 F8WEM9 126 aa7.45□□□□□ -1.22
ERCC1-205ENST00000587888 Q6Q795 121 aa7.45□□□□□ -1.22
ERCC1-205ENST00000587888 Q6ZVH6 145 aa7.45□□□□□ -1.22
ERCC1-205ENST00000587888 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 308.2 ms