RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 FAM19A5Q7Z5A7 132 aaPredicted RBP13.01□□□□□ -0.33
ATG4D-204ENST00000586417 DNAL4O96015 105 aa13□□□□□ -0.33
ATG4D-204ENST00000586417 LINC00575Q6W349 94 aa13□□□□□ -0.33
ATG4D-204ENST00000586417 LINC00167Q96N53 147 aa13□□□□□ -0.33
ATG4D-204ENST00000586417 C22orf24Q9Y442 160 aa13□□□□□ -0.33
ATG4D-204ENST00000586417 IGKV2-24A0A0C4DH68 120 aa12.99□□□□□ -0.33
ATG4D-204ENST00000586417 K7ERU9 68 aa12.99□□□□□ -0.33
ATG4D-204ENST00000586417 KCNQ1DNQ9H478 68 aa12.99□□□□□ -0.33
ATG4D-204ENST00000586417 CBY1Q9Y3M2 126 aa12.99□□□□□ -0.33
ATG4D-204ENST00000586417 BAALC-AS2P0C853 105 aa12.99□□□□□ -0.33
ATG4D-204ENST00000586417 TRBV7-6A0A0J9YX20 115 aa12.98□□□□□ -0.33
ATG4D-204ENST00000586417 SDIM1Q6ZPB5 146 aa12.98□□□□□ -0.33
ATG4D-204ENST00000586417 PPDPFLQ8WWR9 84 aa12.97□□□□□ -0.33
ATG4D-204ENST00000586417 PKIGQ9Y2B9 76 aa12.97□□□□□ -0.33
ATG4D-204ENST00000586417 PKHD1P08F94 4074 aa12.97□□□□□ -0.33
ATG4D-204ENST00000586417 IGLV1-50A0A075B6I6 118 aa12.97□□□□□ -0.33
ATG4D-204ENST00000586417 A0A1W2PNN7 141 aa12.97□□□□□ -0.33
ATG4D-204ENST00000586417 ELOF1P60002 83 aaKnown RBP12.97□□□□□ -0.33
ATG4D-204ENST00000586417 MRPL55Q7Z7F7 128 aaKnown RBP12.97□□□□□ -0.33
ATG4D-204ENST00000586417 CHTF8P0CG12 524 aa12.96□□□□□ -0.34
ATG4D-204ENST00000586417 COX7BP24311 80 aa12.95□□□□□ -0.34
ATG4D-204ENST00000586417 A0A1B0GVY2 172 aa12.94□□□□□ -0.34
ATG4D-204ENST00000586417 RPL37AP8A6NKH3 93 aa12.94□□□□□ -0.34
ATG4D-204ENST00000586417 IGLV5-52A0A0A0MRZ9 124 aa12.94□□□□□ -0.34
ATG4D-204ENST00000586417 TEX49A0A1B0GTD5 131 aa12.94□□□□□ -0.34
ATG4D-204ENST00000586417 DNAH5Q8TE73 4624 aa12.93□□□□□ -0.34
ATG4D-204ENST00000586417 hADV29S1A0JD25 119 aa12.93□□□□□ -0.34
ATG4D-204ENST00000586417 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
ATG4D-204ENST00000586417 PRYO14603 147 aa12.92□□□□□ -0.34
ATG4D-204ENST00000586417 ORMDL1Q9P0S3 153 aa12.92□□□□□ -0.34
ATG4D-204ENST00000586417 SPRR1AP35321 89 aa12.91□□□□□ -0.34
ATG4D-204ENST00000586417 KRTAP4-16G5E9R7 235 aaPredicted RBP12.9□□□□□ -0.34
ATG4D-204ENST00000586417 PANO1I0J062 215 aa12.9□□□□□ -0.34
ATG4D-204ENST00000586417 SNCGO76070 127 aa12.89□□□□□ -0.35
ATG4D-204ENST00000586417 J3QR89 54 aa12.89□□□□□ -0.35
ATG4D-204ENST00000586417 LINC00474Q9P2X8 69 aa12.88□□□□□ -0.35
ATG4D-204ENST00000586417 Q6ZQY7 126 aa12.85□□□□□ -0.35
ATG4D-204ENST00000586417 SPACA4Q8TDM5 124 aa12.84□□□□□ -0.35
ATG4D-204ENST00000586417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.84□□□□□ -0.35
ATG4D-204ENST00000586417 B5MCH6 92 aa12.84□□□□□ -0.35
ATG4D-204ENST00000586417 Q6ZRX8 168 aa12.83□□□□□ -0.36
ATG4D-204ENST00000586417 TMEM256-PLSCR3K7ERE1 68 aa12.82□□□□□ -0.36
ATG4D-204ENST00000586417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.82□□□□□ -0.36
ATG4D-204ENST00000586417 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
ATG4D-204ENST00000586417 EPM2AB3EWF7 344 aa12.81□□□□□ -0.36
ATG4D-204ENST00000586417 KRTAP10-1P60331 282 aa12.81□□□□□ -0.36
ATG4D-204ENST00000586417 REG3GQ6UW15 175 aa12.81□□□□□ -0.36
ATG4D-204ENST00000586417 OBSCN-AS1Q96MR7 158 aa12.81□□□□□ -0.36
ATG4D-204ENST00000586417 ETDCA0A1B0GVM5 59 aa12.81□□□□□ -0.36
ATG4D-204ENST00000586417 INAFM2P0DMQ5 153 aa12.8□□□□□ -0.36
ATG4D-204ENST00000586417 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
ATG4D-204ENST00000586417 Q9BRP9 147 aa12.79□□□□□ -0.36
ATG4D-204ENST00000586417 FAM30AQ9NZY2 134 aa12.76□□□□□ -0.37
ATG4D-204ENST00000586417 DHRS4-AS1Q9P1J3 65 aa12.76□□□□□ -0.37
ATG4D-204ENST00000586417 VPS25Q9BRG1 176 aa12.76□□□□□ -0.37
ATG4D-204ENST00000586417 DYNC1H1Q14204 4646 aaKnown RBP12.75□□□□□ -0.37
ATG4D-204ENST00000586417 H3BQ85 93 aa12.75□□□□□ -0.37
ATG4D-204ENST00000586417 DPH3Q96FX2 82 aa12.75□□□□□ -0.37
ATG4D-204ENST00000586417 LRP1BQ9NZR2 4599 aa12.75□□□□□ -0.37
ATG4D-204ENST00000586417 UBE2BP63146 152 aa12.74□□□□□ -0.37
ATG4D-204ENST00000586417 DNAH8Q96JB1 4490 aa12.74□□□□□ -0.37
ATG4D-204ENST00000586417 EPPK1P58107 5090 aaKnown RBP12.74□□□□□ -0.37
ATG4D-204ENST00000586417 C14orf132Q9NPU4 83 aa12.72□□□□□ -0.37
ATG4D-204ENST00000586417 CDIP1Q9H305 208 aa12.71□□□□□ -0.37
ATG4D-204ENST00000586417 A0A1B0GV72 72 aa12.71□□□□□ -0.38
ATG4D-204ENST00000586417 JMJD7-PLA2G4BH0Y9G9 81 aa12.71□□□□□ -0.38
ATG4D-204ENST00000586417 GHRHP01286 108 aa12.7□□□□□ -0.38
ATG4D-204ENST00000586417 Q6ZSA8 131 aa12.7□□□□□ -0.38
ATG4D-204ENST00000586417 SMCR5Q8TEV8 140 aa12.7□□□□□ -0.38
ATG4D-204ENST00000586417 PLAC8Q9NZF1 115 aa12.7□□□□□ -0.38
ATG4D-204ENST00000586417 ERC2-IT1O76042 136 aa12.69□□□□□ -0.38
ATG4D-204ENST00000586417 LINC01547P58512 204 aaPredicted RBP12.69□□□□□ -0.38
ATG4D-204ENST00000586417 FAM19A1Q7Z5A9 133 aa12.69□□□□□ -0.38
ATG4D-204ENST00000586417 FAM240AA0A1B0GVK7 77 aa12.69□□□□□ -0.38
ATG4D-204ENST00000586417 HAMPP81172 84 aa12.69□□□□□ -0.38
ATG4D-204ENST00000586417 PRLHP81277 87 aa12.68□□□□□ -0.38
ATG4D-204ENST00000586417 LAMTOR3Q9UHA4 124 aa12.67□□□□□ -0.38
ATG4D-204ENST00000586417 Q8N377 158 aa12.66□□□□□ -0.38
ATG4D-204ENST00000586417 ST20-AS1Q8NBB2 130 aa12.66□□□□□ -0.38
ATG4D-204ENST00000586417 H0Y9J4 135 aa12.64□□□□□ -0.39
ATG4D-204ENST00000586417 IGLV5-48A0A075B6I7 105 aa12.64□□□□□ -0.39
ATG4D-204ENST00000586417 NDUFV3P56181 108 aaKnown RBP12.64□□□□□ -0.39
ATG4D-204ENST00000586417 RBM3P98179 157 aaKnown RBP12.63□□□□□ -0.39
ATG4D-204ENST00000586417 GAGE2AQ6NT46 116 aa12.63□□□□□ -0.39
ATG4D-204ENST00000586417 SCXQ7RTU7 201 aa12.63□□□□□ -0.39
ATG4D-204ENST00000586417 DEFB105AQ8NG35 78 aa12.63□□□□□ -0.39
ATG4D-204ENST00000586417 CIRBP-AS1Q8TBR5 109 aa12.63□□□□□ -0.39
ATG4D-204ENST00000586417 BCE1O60756 84 aa12.62□□□□□ -0.39
ATG4D-204ENST00000586417 ACYP1P07311 99 aa12.61□□□□□ -0.39
ATG4D-204ENST00000586417 CCKP06307 115 aa12.6□□□□□ -0.39
ATG4D-204ENST00000586417 KRTAP13-1Q8IUC0 172 aa12.6□□□□□ -0.39
ATG4D-204ENST00000586417 HIGD2AQ9BW72 106 aa12.6□□□□□ -0.39
ATG4D-204ENST00000586417 APOBP04114 4563 aaKnown RBP12.6□□□□□ -0.39
ATG4D-204ENST00000586417 LOC110117498A0A087WWA1 95 aa12.59□□□□□ -0.39
ATG4D-204ENST00000586417 XGP55808 180 aa12.58□□□□□ -0.39
ATG4D-204ENST00000586417 Q6ZQT0 140 aa12.58□□□□□ -0.4
ATG4D-204ENST00000586417 TRBV7-4A0A0J9YYF1 115 aa12.56□□□□□ -0.4
ATG4D-204ENST00000586417 UBE2AP49459 152 aa12.56□□□□□ -0.4
ATG4D-204ENST00000586417 C3orf22Q8N5N4 141 aa12.55□□□□□ -0.4
ATG4D-204ENST00000586417 DSCR8Q96T75 97 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms