RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 KRTAP13-2Q52LG2 175 aa15.97■□□□□ 0.15
SMARCD2-210ENST00000584400 ANKRD39Q53RE8 183 aa15.97■□□□□ 0.15
SMARCD2-210ENST00000584400 SMCR5Q8TEV8 140 aa15.97■□□□□ 0.15
SMARCD2-210ENST00000584400 COPS9Q8WXC6 57 aa15.97■□□□□ 0.15
SMARCD2-210ENST00000584400 HIST1H2BLQ99880 126 aa15.97■□□□□ 0.15
SMARCD2-210ENST00000584400 JOSD1Q15040 202 aaPredicted RBP15.94■□□□□ 0.14
SMARCD2-210ENST00000584400 HINT1P49773 126 aaPredicted RBP15.93■□□□□ 0.14
SMARCD2-210ENST00000584400 Q6ZRX8 168 aa15.93■□□□□ 0.14
SMARCD2-210ENST00000584400 LINC00518Q8N0U6 118 aa15.93■□□□□ 0.14
SMARCD2-210ENST00000584400 SPANXDQ9BXN6 97 aa15.93■□□□□ 0.14
SMARCD2-210ENST00000584400 ZNF73O43830 326 aaPredicted RBP15.92■□□□□ 0.14
SMARCD2-210ENST00000584400 TSPAN13O95857 204 aa15.92■□□□□ 0.14
SMARCD2-210ENST00000584400 OR13C6PQ8NH95 151 aa15.92■□□□□ 0.14
SMARCD2-210ENST00000584400 LINC00304Q8N9R0 145 aa15.91■□□□□ 0.14
SMARCD2-210ENST00000584400 HSBP1L1C9JCN9 74 aa15.9■□□□□ 0.14
SMARCD2-210ENST00000584400 Q6ZVH6 145 aa15.9■□□□□ 0.14
SMARCD2-210ENST00000584400 IFITM1P13164 125 aa15.89■□□□□ 0.13
SMARCD2-210ENST00000584400 CTAG1AP78358 180 aa15.88■□□□□ 0.13
SMARCD2-210ENST00000584400 PPDPFQ9H3Y8 114 aa15.87■□□□□ 0.13
SMARCD2-210ENST00000584400 PRR4Q16378 134 aa15.86■□□□□ 0.13
SMARCD2-210ENST00000584400 PCP2Q8IVA1 136 aa15.86■□□□□ 0.13
SMARCD2-210ENST00000584400 C3orf22Q8N5N4 141 aa15.84■□□□□ 0.13
SMARCD2-210ENST00000584400 Q9BRP9 147 aa15.84■□□□□ 0.13
SMARCD2-210ENST00000584400 LINC00483Q53H64 154 aa15.83■□□□□ 0.12
SMARCD2-210ENST00000584400 GAGE2AQ6NT46 116 aa15.83■□□□□ 0.12
SMARCD2-210ENST00000584400 SPAG11AQ6PDA7 123 aa15.82■□□□□ 0.12
SMARCD2-210ENST00000584400 ERC2-IT1O76042 136 aa15.8■□□□□ 0.12
SMARCD2-210ENST00000584400 C5orf52A6NGY3 159 aa15.78■□□□□ 0.12
SMARCD2-210ENST00000584400 C4orf48Q5BLP8 95 aa15.78■□□□□ 0.12
SMARCD2-210ENST00000584400 SCGB1D1O95968 90 aa15.76■□□□□ 0.11
SMARCD2-210ENST00000584400 MUSTN1Q8IVN3 82 aa15.76■□□□□ 0.11
SMARCD2-210ENST00000584400 DHRS4-AS1Q9P1J3 65 aa15.75■□□□□ 0.11
SMARCD2-210ENST00000584400 UBR4Q5T4S7 5183 aa15.74■□□□□ 0.11
SMARCD2-210ENST00000584400 LRP2P98164 4655 aa15.72■□□□□ 0.11
SMARCD2-210ENST00000584400 A6NDN8 102 aa15.72■□□□□ 0.11
SMARCD2-210ENST00000584400 C6orf99Q4VX62 202 aa15.72■□□□□ 0.11
SMARCD2-210ENST00000584400 Q8NBF4 154 aa15.71■□□□□ 0.11
SMARCD2-210ENST00000584400 COX7BP24311 80 aa15.7■□□□□ 0.1
SMARCD2-210ENST00000584400 TRAV13-2A0A0B4J235 113 aa15.69■□□□□ 0.1
SMARCD2-210ENST00000584400 ELOF1P60002 83 aaKnown RBP15.69■□□□□ 0.1
SMARCD2-210ENST00000584400 SSBP3-AS1Q7Z2R9 100 aa15.69■□□□□ 0.1
SMARCD2-210ENST00000584400 IGLV9-49A0A0B4J1Y8 123 aa15.68■□□□□ 0.1
SMARCD2-210ENST00000584400 TRBV7-6A0A0J9YX20 115 aa15.68■□□□□ 0.1
SMARCD2-210ENST00000584400 MOBPQ13875 183 aa15.66■□□□□ 0.1
SMARCD2-210ENST00000584400 SPINK1P00995 79 aa15.65■□□□□ 0.1
SMARCD2-210ENST00000584400 SLC25A34Q6PIV7 304 aa15.65■□□□□ 0.1
SMARCD2-210ENST00000584400 ST20-AS1Q8NBB2 130 aa15.64■□□□□ 0.09
SMARCD2-210ENST00000584400 A0A1B0GWB2 263 aa15.63■□□□□ 0.09
SMARCD2-210ENST00000584400 RETNLBQ9BQ08 111 aa15.63■□□□□ 0.09
SMARCD2-210ENST00000584400 A4D1N5 150 aa15.6■□□□□ 0.09
SMARCD2-210ENST00000584400 C9orf153Q5TBE3 101 aa15.6■□□□□ 0.09
SMARCD2-210ENST00000584400 SPRR1BP22528 89 aa15.59■□□□□ 0.09
SMARCD2-210ENST00000584400 COX8AP10176 69 aa15.58■□□□□ 0.08
SMARCD2-210ENST00000584400 DLEU1O43261 78 aa15.56■□□□□ 0.08
SMARCD2-210ENST00000584400 LAMTOR3Q9UHA4 124 aa15.56■□□□□ 0.08
SMARCD2-210ENST00000584400 LPAP08519 4548 aa15.55■□□□□ 0.08
SMARCD2-210ENST00000584400 IGLV7-46A0A075B6I9 117 aa15.55■□□□□ 0.08
SMARCD2-210ENST00000584400 RPS29P62273 56 aaKnown RBP15.55■□□□□ 0.08
SMARCD2-210ENST00000584400 TAL2Q16559 108 aa15.55■□□□□ 0.08
SMARCD2-210ENST00000584400 NHP2Q9NX24 153 aaKnown RBP15.55■□□□□ 0.08
SMARCD2-210ENST00000584400 SMIM11BQ8TCY0 68 aa15.54■□□□□ 0.08
SMARCD2-210ENST00000584400 HIST1H4GQ99525 98 aa15.54■□□□□ 0.08
SMARCD2-210ENST00000584400 VAMP3Q15836 100 aa15.53■□□□□ 0.08
SMARCD2-210ENST00000584400 FP248Q71RG6 208 aaPredicted RBP15.52■□□□□ 0.08
SMARCD2-210ENST00000584400 TEX49A0A1B0GTD5 131 aa15.5■□□□□ 0.07
SMARCD2-210ENST00000584400 VAMP8Q9BV40 100 aa15.5■□□□□ 0.07
SMARCD2-210ENST00000584400 TPRXLQ17RH7 258 aa15.49■□□□□ 0.07
SMARCD2-210ENST00000584400 DEFB105AQ8NG35 78 aa15.49■□□□□ 0.07
SMARCD2-210ENST00000584400 PAM16Q9Y3D7 125 aa15.49■□□□□ 0.07
SMARCD2-210ENST00000584400 SLC25A20O43772 301 aa15.48■□□□□ 0.07
SMARCD2-210ENST00000584400 SPATA45Q537H7 98 aa15.48■□□□□ 0.07
SMARCD2-210ENST00000584400 C14orf144Q96I85 54 aa15.46■□□□□ 0.07
SMARCD2-210ENST00000584400 CDIP1Q9H305 208 aa15.45■□□□□ 0.06
SMARCD2-210ENST00000584400 HIGD1BQ9P298 99 aa15.43■□□□□ 0.06
SMARCD2-210ENST00000584400 IGLV5-48A0A075B6I7 105 aa15.42■□□□□ 0.06
SMARCD2-210ENST00000584400 Q1RN00 199 aa15.41■□□□□ 0.06
SMARCD2-210ENST00000584400 Q8N377 158 aa15.41■□□□□ 0.06
SMARCD2-210ENST00000584400 C12orf57Q99622 126 aa15.39■□□□□ 0.05
SMARCD2-210ENST00000584400 PRO1933Q9H354 126 aa15.38■□□□□ 0.05
SMARCD2-210ENST00000584400 BVES-AS1Q5T3Y7 98 aa15.37■□□□□ 0.05
SMARCD2-210ENST00000584400 LINC00575Q6W349 94 aa15.36■□□□□ 0.05
SMARCD2-210ENST00000584400 LIMD2Q9BT23 127 aa15.36■□□□□ 0.05
SMARCD2-210ENST00000584400 LINC01547P58512 204 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-210ENST00000584400 RAB37Q96AX2 223 aa15.34■□□□□ 0.05
SMARCD2-210ENST00000584400 hADV29S1A0JD25 119 aa15.33■□□□□ 0.04
SMARCD2-210ENST00000584400 SMIM29Q86T20 159 aa15.33■□□□□ 0.04
SMARCD2-210ENST00000584400 CD164Q04900 197 aa15.32■□□□□ 0.04
SMARCD2-210ENST00000584400 RNF213Q63HN8 5207 aa15.31■□□□□ 0.04
SMARCD2-210ENST00000584400 C2orf91Q6ZV80 131 aa15.3■□□□□ 0.04
SMARCD2-210ENST00000584400 CFC1BP0CG36 223 aa15.29■□□□□ 0.04
SMARCD2-210ENST00000584400 CFC1P0CG37 223 aa15.29■□□□□ 0.04
SMARCD2-210ENST00000584400 HRCT1Q6UXD1 115 aa15.29■□□□□ 0.04
SMARCD2-210ENST00000584400 A0A0B4J2C4 111 aa15.28■□□□□ 0.04
SMARCD2-210ENST00000584400 TMEM238LA0A1B0GVL6 79 aa15.27■□□□□ 0.04
SMARCD2-210ENST00000584400 A6NJY4 79 aa15.27■□□□□ 0.04
SMARCD2-210ENST00000584400 F8WEM9 126 aa15.27■□□□□ 0.04
SMARCD2-210ENST00000584400 H7C2G1 150 aa15.27■□□□□ 0.04
SMARCD2-210ENST00000584400 PYY3Q5JQD4 70 aa15.27■□□□□ 0.04
SMARCD2-210ENST00000584400 Q6ZQY7 126 aa15.27■□□□□ 0.04
SMARCD2-210ENST00000584400 TMA7Q9Y2S6 64 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms