RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
RTTN-209ENST00000583043 RANBP2P49792 3224 aaKnown RBP3.79□□□□□ -1.8
RTTN-209ENST00000583043 POLQO75417 2590 aa3.78□□□□□ -1.8
RTTN-209ENST00000583043 EPG5Q9HCE0 2579 aa3.78□□□□□ -1.8
RTTN-209ENST00000583043 ZFYVE26Q68DK2 2539 aa3.78□□□□□ -1.8
RTTN-209ENST00000583043 MYO15AQ9UKN7 3530 aa3.78□□□□□ -1.8
RTTN-209ENST00000583043 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.8
RTTN-209ENST00000583043 CD164Q04900 197 aa3.78□□□□□ -1.8
RTTN-209ENST00000583043 SPANXA2-OT1Q8N9U9 137 aa3.78□□□□□ -1.8
RTTN-209ENST00000583043 MTORP42345 2549 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 PRR15Q8IV56 129 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 FN1P02751 2386 aaKnown RBP3.77□□□□□ -1.81
RTTN-209ENST00000583043 SPEGQ15772 3267 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 LOC101927531A0A1B0GV80 90 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 TRAV22A0A0B4J277 110 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 IGFL1Q6UW32 110 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 IGLV9-49A0A0B4J1Y8 123 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 PRO0628Q9UI54 55 aa3.77□□□□□ -1.81
RTTN-209ENST00000583043 CFAP54Q96N23 3096 aa3.76□□□□□ -1.81
RTTN-209ENST00000583043 RTL8CO15255 209 aa3.76□□□□□ -1.81
RTTN-209ENST00000583043 C1orf64Q8NEQ6 169 aa3.76□□□□□ -1.81
RTTN-209ENST00000583043 H7BZZ5 65 aa3.76□□□□□ -1.81
RTTN-209ENST00000583043 A0A1W2PNM2 257 aa3.75□□□□□ -1.81
RTTN-209ENST00000583043 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
RTTN-209ENST00000583043 EYSQ5T1H1 3165 aa3.75□□□□□ -1.81
RTTN-209ENST00000583043 SPTBN5Q9NRC6 3674 aaKnown RBP3.75□□□□□ -1.81
RTTN-209ENST00000583043 ZNF861PO60384 105 aa3.74□□□□□ -1.81
RTTN-209ENST00000583043 PHF5AQ7RTV0 110 aaKnown RBP3.74□□□□□ -1.81
RTTN-209ENST00000583043 PRR4Q16378 134 aa3.74□□□□□ -1.81
RTTN-209ENST00000583043 OCR1Q9BZK8 76 aa3.74□□□□□ -1.81
RTTN-209ENST00000583043 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
RTTN-209ENST00000583043 A0A087WTM6 91 aa3.73□□□□□ -1.81
RTTN-209ENST00000583043 IGHV6-1A0A0B4J1U7 121 aa3.73□□□□□ -1.81
RTTN-209ENST00000583043 TNP2Q05952 138 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 PRRC2CQ9Y520 2896 aaKnown RBP3.72□□□□□ -1.81
RTTN-209ENST00000583043 FAM168BA1KXE4 195 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 K7EQZ3 153 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 M0R2T5 61 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 SPAG11AQ6PDA7 123 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 HRCT1Q6UXD1 115 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 MRPL34Q9BQ48 92 aaKnown RBP3.72□□□□□ -1.81
RTTN-209ENST00000583043 MPLKIPQ8TAP9 179 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 LAMA1P25391 3075 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 ACANP16112 2415 aa3.72□□□□□ -1.81
RTTN-209ENST00000583043 FLNAP21333 2647 aaKnown RBP3.71□□□□□ -1.81
RTTN-209ENST00000583043 USP24Q9UPU5 2620 aa3.71□□□□□ -1.81
RTTN-209ENST00000583043 A0A1B0GVX0 72 aa3.71□□□□□ -1.82
RTTN-209ENST00000583043 KRTAP4-16G5E9R7 235 aaPredicted RBP3.71□□□□□ -1.82
RTTN-209ENST00000583043 JMJD1CQ15652 2540 aa3.71□□□□□ -1.82
RTTN-209ENST00000583043 ACYP2P14621 99 aa3.71□□□□□ -1.82
RTTN-209ENST00000583043 FASNP49327 2511 aaKnown RBP3.71□□□□□ -1.82
RTTN-209ENST00000583043 C8orf17Q9NRJ1 99 aa3.71□□□□□ -1.82
RTTN-209ENST00000583043 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
RTTN-209ENST00000583043 Q8NDZ9 215 aa3.7□□□□□ -1.82
RTTN-209ENST00000583043 SETD2Q9BYW2 2564 aaPredicted RBP3.7□□□□□ -1.82
RTTN-209ENST00000583043 CIRBP-AS1Q8TBR5 109 aa3.7□□□□□ -1.82
RTTN-209ENST00000583043 A0A1W2PNN7 141 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 TRIOO75962 3097 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 SPINK6Q6UWN8 80 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 PLAC8Q9NZF1 115 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 AKAP13Q12802 2813 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 DSCR10P59022 87 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 SPACA4Q8TDM5 124 aa3.69□□□□□ -1.82
RTTN-209ENST00000583043 IGLV7-43P04211 117 aa3.68□□□□□ -1.82
RTTN-209ENST00000583043 A6NED7 52 aa3.68□□□□□ -1.82
RTTN-209ENST00000583043 ITPR3Q14573 2671 aa3.68□□□□□ -1.82
RTTN-209ENST00000583043 LINC00313P59037 77 aa3.67□□□□□ -1.82
RTTN-209ENST00000583043 CASC10Q5T4H9 136 aa3.67□□□□□ -1.82
RTTN-209ENST00000583043 F8P00451 2351 aa3.67□□□□□ -1.82
RTTN-209ENST00000583043 IGSF10Q6WRI0 2623 aa3.67□□□□□ -1.82
RTTN-209ENST00000583043 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
RTTN-209ENST00000583043 LINC00483Q53H64 154 aa3.66□□□□□ -1.82
RTTN-209ENST00000583043 Q1T7F1 81 aa3.66□□□□□ -1.82
RTTN-209ENST00000583043 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.83
RTTN-209ENST00000583043 LINC00472Q9H8W2 130 aa3.65□□□□□ -1.83
RTTN-209ENST00000583043 PSORS1C2Q9UIG4 136 aa3.65□□□□□ -1.83
RTTN-209ENST00000583043 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
RTTN-209ENST00000583043 LCE6AA0A183 80 aa3.64□□□□□ -1.83
RTTN-209ENST00000583043 SPINK1P00995 79 aa3.63□□□□□ -1.83
RTTN-209ENST00000583043 IGLV7-46A0A075B6I9 117 aa3.63□□□□□ -1.83
RTTN-209ENST00000583043 PCOTHQ58A44 107 aa3.63□□□□□ -1.83
RTTN-209ENST00000583043 HELZ2Q9BYK8 2649 aaKnown RBP3.62□□□□□ -1.83
RTTN-209ENST00000583043 C4orf26Q17RF5 130 aa3.62□□□□□ -1.83
RTTN-209ENST00000583043 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
RTTN-209ENST00000583043 COA5Q86WW8 74 aa3.62□□□□□ -1.83
RTTN-209ENST00000583043 DMDP11532 3685 aa3.62□□□□□ -1.83
RTTN-209ENST00000583043 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
RTTN-209ENST00000583043 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
RTTN-209ENST00000583043 PRUNE2Q8WUY3 3088 aa3.61□□□□□ -1.83
RTTN-209ENST00000583043 A8MUN3 132 aa3.6□□□□□ -1.83
RTTN-209ENST00000583043 Q6ZR54 194 aa3.6□□□□□ -1.83
RTTN-209ENST00000583043 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
RTTN-209ENST00000583043 FRYLO94915 3013 aa3.6□□□□□ -1.83
RTTN-209ENST00000583043 HECTD1Q9ULT8 2610 aa3.6□□□□□ -1.83
RTTN-209ENST00000583043 Q5VSD8 79 aa3.59□□□□□ -1.83
RTTN-209ENST00000583043 ZCCHC13Q8WW36 166 aaKnown RBP3.59□□□□□ -1.83
RTTN-209ENST00000583043 MGAQ8IWI9 3026 aa3.59□□□□□ -1.83
RTTN-209ENST00000583043 TNRC18O15417 2968 aaPredicted RBP3.59□□□□□ -1.83
RTTN-209ENST00000583043 KRTAP29-1A8MX34 341 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms