RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-218ENST00000582955 TIMM17BO60830 172 aa7.5□□□□□ -1.21
SMARCE1-218ENST00000582955 NDUFC2O95298 119 aa7.5□□□□□ -1.21
SMARCE1-218ENST00000582955 DDTP30046 118 aa7.5□□□□□ -1.21
SMARCE1-218ENST00000582955 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
SMARCE1-218ENST00000582955 KCNQ1DNQ9H478 68 aa7.5□□□□□ -1.21
SMARCE1-218ENST00000582955 CRYGAP11844 174 aa7.49□□□□□ -1.21
SMARCE1-218ENST00000582955 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
SMARCE1-218ENST00000582955 LINC00337Q8N6G1 96 aa7.49□□□□□ -1.21
SMARCE1-218ENST00000582955 LITAFQ99732 161 aa7.49□□□□□ -1.21
SMARCE1-218ENST00000582955 ANAPC11Q9NYG5 84 aa7.49□□□□□ -1.21
SMARCE1-218ENST00000582955 A0A087X002 238 aa7.48□□□□□ -1.21
SMARCE1-218ENST00000582955 SPRR1AP35321 89 aa7.48□□□□□ -1.21
SMARCE1-218ENST00000582955 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-218ENST00000582955 LINC00308Q8TCZ7 52 aa7.48□□□□□ -1.21
SMARCE1-218ENST00000582955 LCE1DQ5T752 114 aa7.46□□□□□ -1.22
SMARCE1-218ENST00000582955 TYMSOSQ8TAI1 123 aa7.46□□□□□ -1.22
SMARCE1-218ENST00000582955 SPANXCQ9NY87 97 aa7.46□□□□□ -1.22
SMARCE1-218ENST00000582955 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
SMARCE1-218ENST00000582955 HSBP1L1C9JCN9 74 aa7.45□□□□□ -1.22
SMARCE1-218ENST00000582955 KRTAP4-16G5E9R7 235 aaPredicted RBP7.45□□□□□ -1.22
SMARCE1-218ENST00000582955 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
SMARCE1-218ENST00000582955 FAM229BQ4G0N7 80 aa7.45□□□□□ -1.22
SMARCE1-218ENST00000582955 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
SMARCE1-218ENST00000582955 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
SMARCE1-218ENST00000582955 SPANXDQ9BXN6 97 aa7.44□□□□□ -1.22
SMARCE1-218ENST00000582955 ZNF706Q9Y5V0 76 aaPredicted RBP7.44□□□□□ -1.22
SMARCE1-218ENST00000582955 B5MCH6 92 aa7.43□□□□□ -1.22
SMARCE1-218ENST00000582955 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
SMARCE1-218ENST00000582955 SMCR5Q8TEV8 140 aa7.43□□□□□ -1.22
SMARCE1-218ENST00000582955 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
SMARCE1-218ENST00000582955 C5orf52A6NGY3 159 aa7.42□□□□□ -1.22
SMARCE1-218ENST00000582955 SCGB1D1O95968 90 aa7.42□□□□□ -1.22
SMARCE1-218ENST00000582955 CBY1Q9Y3M2 126 aa7.42□□□□□ -1.22
SMARCE1-218ENST00000582955 ZNF73O43830 326 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-218ENST00000582955 Q6ZRX8 168 aa7.41□□□□□ -1.22
SMARCE1-218ENST00000582955 COPS9Q8WXC6 57 aa7.41□□□□□ -1.22
SMARCE1-218ENST00000582955 TSPAN13O95857 204 aa7.4□□□□□ -1.22
SMARCE1-218ENST00000582955 IFITM1P13164 125 aa7.4□□□□□ -1.22
SMARCE1-218ENST00000582955 Q6ZVH6 145 aa7.4□□□□□ -1.22
SMARCE1-218ENST00000582955 LINC00518Q8N0U6 118 aa7.4□□□□□ -1.22
SMARCE1-218ENST00000582955 HINT1P49773 126 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1-218ENST00000582955 JOSD1Q15040 202 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1-218ENST00000582955 C3orf22Q8N5N4 141 aa7.39□□□□□ -1.23
SMARCE1-218ENST00000582955 Q9BRP9 147 aa7.39□□□□□ -1.23
SMARCE1-218ENST00000582955 PPDPFQ9H3Y8 114 aa7.39□□□□□ -1.23
SMARCE1-218ENST00000582955 ERC2-IT1O76042 136 aa7.38□□□□□ -1.23
SMARCE1-218ENST00000582955 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
SMARCE1-218ENST00000582955 GAGE2AQ6NT46 116 aa7.37□□□□□ -1.23
SMARCE1-218ENST00000582955 LINC00304Q8N9R0 145 aa7.37□□□□□ -1.23
SMARCE1-218ENST00000582955 A6NDN8 102 aa7.36□□□□□ -1.23
SMARCE1-218ENST00000582955 PRR4Q16378 134 aa7.35□□□□□ -1.23
SMARCE1-218ENST00000582955 C6orf99Q4VX62 202 aa7.34□□□□□ -1.23
SMARCE1-218ENST00000582955 LINC00483Q53H64 154 aa7.34□□□□□ -1.23
SMARCE1-218ENST00000582955 LRP2P98164 4655 aa7.33□□□□□ -1.24
SMARCE1-218ENST00000582955 COX7BP24311 80 aa7.32□□□□□ -1.24
SMARCE1-218ENST00000582955 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 IGLV9-49A0A0B4J1Y8 123 aa7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 COX8AP10176 69 aa7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 ST20-AS1Q8NBB2 130 aa7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 PAM16Q9Y3D7 125 aa7.31□□□□□ -1.24
SMARCE1-218ENST00000582955 MOBPQ13875 183 aa7.3□□□□□ -1.24
SMARCE1-218ENST00000582955 Q8NBF4 154 aa7.3□□□□□ -1.24
SMARCE1-218ENST00000582955 A4D1N5 150 aa7.29□□□□□ -1.24
SMARCE1-218ENST00000582955 SPATA45Q537H7 98 aa7.29□□□□□ -1.24
SMARCE1-218ENST00000582955 SPAG11AQ6PDA7 123 aa7.29□□□□□ -1.24
SMARCE1-218ENST00000582955 HIST1H4GQ99525 98 aa7.29□□□□□ -1.24
SMARCE1-218ENST00000582955 VAMP8Q9BV40 100 aa7.29□□□□□ -1.24
SMARCE1-218ENST00000582955 TMA7Q9Y2S6 64 aaKnown RBP7.29□□□□□ -1.24
SMARCE1-218ENST00000582955 A0A1B0GWB2 263 aa7.28□□□□□ -1.24
SMARCE1-218ENST00000582955 C14orf144Q96I85 54 aa7.28□□□□□ -1.24
SMARCE1-218ENST00000582955 RETNLBQ9BQ08 111 aa7.28□□□□□ -1.24
SMARCE1-218ENST00000582955 TRBV7-6A0A0J9YX20 115 aa7.27□□□□□ -1.25
SMARCE1-218ENST00000582955 DLEU1O43261 78 aa7.27□□□□□ -1.25
SMARCE1-218ENST00000582955 C9orf153Q5TBE3 101 aa7.27□□□□□ -1.25
SMARCE1-218ENST00000582955 SMIM11BQ8TCY0 68 aa7.27□□□□□ -1.25
SMARCE1-218ENST00000582955 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
SMARCE1-218ENST00000582955 LPAP08519 4548 aa7.27□□□□□ -1.25
SMARCE1-218ENST00000582955 CTAG1AP78358 180 aa7.26□□□□□ -1.25
SMARCE1-218ENST00000582955 SSBP3-AS1Q7Z2R9 100 aa7.25□□□□□ -1.25
SMARCE1-218ENST00000582955 DEFB105AQ8NG35 78 aa7.25□□□□□ -1.25
SMARCE1-218ENST00000582955 C12orf57Q99622 126 aa7.25□□□□□ -1.25
SMARCE1-218ENST00000582955 TAL2Q16559 108 aa7.24□□□□□ -1.25
SMARCE1-218ENST00000582955 SLC25A34Q6PIV7 304 aa7.24□□□□□ -1.25
SMARCE1-218ENST00000582955 SPRR1BP22528 89 aa7.23□□□□□ -1.25
SMARCE1-218ENST00000582955 SPINK1P00995 79 aa7.22□□□□□ -1.25
SMARCE1-218ENST00000582955 VAMP3Q15836 100 aa7.22□□□□□ -1.25
SMARCE1-218ENST00000582955 NHP2Q9NX24 153 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-218ENST00000582955 HIGD1BQ9P298 99 aa7.22□□□□□ -1.25
SMARCE1-218ENST00000582955 LAMTOR3Q9UHA4 124 aa7.22□□□□□ -1.25
SMARCE1-218ENST00000582955 PYY3Q5JQD4 70 aa7.21□□□□□ -1.26
SMARCE1-218ENST00000582955 TEX49A0A1B0GTD5 131 aa7.2□□□□□ -1.26
SMARCE1-218ENST00000582955 SLC25A20O43772 301 aa7.2□□□□□ -1.26
SMARCE1-218ENST00000582955 Q1RN00 199 aa7.2□□□□□ -1.26
SMARCE1-218ENST00000582955 C2orf91Q6ZV80 131 aa7.2□□□□□ -1.26
SMARCE1-218ENST00000582955 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
SMARCE1-218ENST00000582955 H7C2G1 150 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms