RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SPANXB1Q9NS25 103 aaPredicted RBP7.92□□□□□ -1.14
SS18-222ENST00000582792 SPATA45Q537H7 98 aa7.91□□□□□ -1.14
SS18-222ENST00000582792 MUC17Q685J3 4493 aa7.9□□□□□ -1.14
SS18-222ENST00000582792 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
SS18-222ENST00000582792 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
SS18-222ENST00000582792 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
SS18-222ENST00000582792 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
SS18-222ENST00000582792 RPL37AP8A6NKH3 93 aa7.89□□□□□ -1.15
SS18-222ENST00000582792 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
SS18-222ENST00000582792 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
SS18-222ENST00000582792 KRTAP13-2Q52LG2 175 aa7.89□□□□□ -1.15
SS18-222ENST00000582792 NCR3O14931 201 aa7.88□□□□□ -1.15
SS18-222ENST00000582792 LINC00518Q8N0U6 118 aa7.88□□□□□ -1.15
SS18-222ENST00000582792 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
SS18-222ENST00000582792 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
SS18-222ENST00000582792 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 PRYO14603 147 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 NPC2P61916 151 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 SLC25A34Q6PIV7 304 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 HIGD1BQ9P298 99 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 CBY1Q9Y3M2 126 aa7.87□□□□□ -1.15
SS18-222ENST00000582792 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
SS18-222ENST00000582792 DDTP30046 118 aa7.86□□□□□ -1.15
SS18-222ENST00000582792 S100A12P80511 92 aa7.86□□□□□ -1.15
SS18-222ENST00000582792 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
SS18-222ENST00000582792 KRTAP13-1Q8IUC0 172 aa7.86□□□□□ -1.15
SS18-222ENST00000582792 MUSTN1Q8IVN3 82 aa7.86□□□□□ -1.15
SS18-222ENST00000582792 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
SS18-222ENST00000582792 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
SS18-222ENST00000582792 SPRR1AP35321 89 aa7.85□□□□□ -1.15
SS18-222ENST00000582792 C14orf144Q96I85 54 aa7.85□□□□□ -1.15
SS18-222ENST00000582792 IGLV7-46A0A075B6I9 117 aa7.84□□□□□ -1.15
SS18-222ENST00000582792 UBE2AP49459 152 aa7.84□□□□□ -1.15
SS18-222ENST00000582792 S100A7L2Q5SY68 101 aa7.84□□□□□ -1.15
SS18-222ENST00000582792 LINC00337Q8N6G1 96 aa7.84□□□□□ -1.15
SS18-222ENST00000582792 CTAG1AP78358 180 aa7.83□□□□□ -1.16
SS18-222ENST00000582792 KRTAP4-16G5E9R7 235 aaPredicted RBP7.81□□□□□ -1.16
SS18-222ENST00000582792 SMIM6P0DI80 62 aa7.81□□□□□ -1.16
SS18-222ENST00000582792 TAL2Q16559 108 aa7.81□□□□□ -1.16
SS18-222ENST00000582792 HIST1H4GQ99525 98 aa7.81□□□□□ -1.16
SS18-222ENST00000582792 TRAV23DV6A0A075B6W5 121 aa7.8□□□□□ -1.16
SS18-222ENST00000582792 TRAV13-2A0A0B4J235 113 aa7.8□□□□□ -1.16
SS18-222ENST00000582792 C2orf91Q6ZV80 131 aa7.8□□□□□ -1.16
SS18-222ENST00000582792 FAM19A1Q7Z5A9 133 aa7.8□□□□□ -1.16
SS18-222ENST00000582792 LOC105371267A0A1B0GV96 52 aa7.79□□□□□ -1.16
SS18-222ENST00000582792 OR13C6PQ8NH95 151 aa7.79□□□□□ -1.16
SS18-222ENST00000582792 ETDCA0A1B0GVM5 59 aa7.78□□□□□ -1.16
SS18-222ENST00000582792 UQCR10Q9UDW1 63 aa7.78□□□□□ -1.16
SS18-222ENST00000582792 A4D1N5 150 aa7.77□□□□□ -1.17
SS18-222ENST00000582792 ZNF73O43830 326 aaPredicted RBP7.77□□□□□ -1.17
SS18-222ENST00000582792 PRLHP81277 87 aa7.77□□□□□ -1.17
SS18-222ENST00000582792 B5MCH6 92 aa7.76□□□□□ -1.17
SS18-222ENST00000582792 HINT1P49773 126 aaPredicted RBP7.76□□□□□ -1.17
SS18-222ENST00000582792 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
SS18-222ENST00000582792 A6NDN8 102 aa7.74□□□□□ -1.17
SS18-222ENST00000582792 Q6ZRX8 168 aa7.74□□□□□ -1.17
SS18-222ENST00000582792 CEND1Q8N111 149 aa7.74□□□□□ -1.17
SS18-222ENST00000582792 TMEM238LA0A1B0GVL6 79 aa7.73□□□□□ -1.17
SS18-222ENST00000582792 A6NJY4 79 aa7.73□□□□□ -1.17
SS18-222ENST00000582792 HSD52Q0P140 79 aa7.73□□□□□ -1.17
SS18-222ENST00000582792 C3orf22Q8N5N4 141 aa7.73□□□□□ -1.17
SS18-222ENST00000582792 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
SS18-222ENST00000582792 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
SS18-222ENST00000582792 A0A0B4J2C4 111 aa7.71□□□□□ -1.18
SS18-222ENST00000582792 SMCR5Q8TEV8 140 aa7.71□□□□□ -1.18
SS18-222ENST00000582792 HIGD2AQ9BW72 106 aa7.71□□□□□ -1.18
SS18-222ENST00000582792 ZNF706Q9Y5V0 76 aaPredicted RBP7.71□□□□□ -1.18
SS18-222ENST00000582792 A0A1B0GWB2 263 aa7.7□□□□□ -1.18
SS18-222ENST00000582792 CFC1BP0CG36 223 aa7.7□□□□□ -1.18
SS18-222ENST00000582792 CFC1P0CG37 223 aa7.7□□□□□ -1.18
SS18-222ENST00000582792 LINC01547P58512 204 aaPredicted RBP7.7□□□□□ -1.18
SS18-222ENST00000582792 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
SS18-222ENST00000582792 ASB16-AS1Q495Z4 193 aa7.7□□□□□ -1.18
SS18-222ENST00000582792 C6orf99Q4VX62 202 aa7.7□□□□□ -1.18
SS18-222ENST00000582792 DHRS4-AS1Q9P1J3 65 aa7.7□□□□□ -1.18
SS18-222ENST00000582792 COX7BP24311 80 aa7.69□□□□□ -1.18
SS18-222ENST00000582792 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
SS18-222ENST00000582792 SMIM11BQ8TCY0 68 aa7.69□□□□□ -1.18
SS18-222ENST00000582792 Q9BRP9 147 aa7.69□□□□□ -1.18
SS18-222ENST00000582792 FXYD2P54710 66 aa7.68□□□□□ -1.18
SS18-222ENST00000582792 RAB37Q96AX2 223 aa7.68□□□□□ -1.18
SS18-222ENST00000582792 SPRR4Q96PI1 79 aa7.68□□□□□ -1.18
SS18-222ENST00000582792 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
SS18-222ENST00000582792 VAMP3Q15836 100 aa7.67□□□□□ -1.18
SS18-222ENST00000582792 C12orf57Q99622 126 aa7.67□□□□□ -1.18
SS18-222ENST00000582792 PRO1933Q9H354 126 aa7.67□□□□□ -1.18
SS18-222ENST00000582792 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
SS18-222ENST00000582792 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
SS18-222ENST00000582792 ERC2-IT1O76042 136 aa7.65□□□□□ -1.18
SS18-222ENST00000582792 LINC00483Q53H64 154 aa7.65□□□□□ -1.18
SS18-222ENST00000582792 TSTD3H0UI37 97 aa7.64□□□□□ -1.19
SS18-222ENST00000582792 NHP2Q9NX24 153 aaKnown RBP7.64□□□□□ -1.19
SS18-222ENST00000582792 CRCT1Q9UGL9 99 aa7.64□□□□□ -1.19
SS18-222ENST00000582792 PRO1854Q9UHT4 67 aa7.64□□□□□ -1.19
SS18-222ENST00000582792 SEC61BP60468 96 aaKnown RBP7.63□□□□□ -1.19
SS18-222ENST00000582792 BVES-AS1Q5T3Y7 98 aa7.63□□□□□ -1.19
SS18-222ENST00000582792 Q8NBF4 154 aa7.63□□□□□ -1.19
SS18-222ENST00000582792 SPINK1P00995 79 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms