RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 TRBV6-8A0A0A6YYG3 113 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 IGKV3OR2-268A0A0C4DH90 116 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 A8MTW9 85 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 A8MUU9 505 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 LY6HO94772 140 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 IGHV3-53P01767 116 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 PDE6GP18545 87 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 DEFB114Q30KQ6 69 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 C6orf99Q4VX62 202 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 LINC00575Q6W349 94 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 ATP11AUNQ6ZP68 121 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 Q6ZQY7 126 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 PHF5AQ7RTV0 110 aaKnown RBP1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 C5orf56Q8N8D9 126 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 CDC42SE2Q9NRR3 84 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 MINOS1-NBL1R4GNA1 71 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 FRYQ5TBA9 3013 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 CACNA1BQ00975 2339 aa1.15□□□□□ -2.23
PTP4A1-204ENST00000578299 GPR179Q6PRD1 2367 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 TECTAO75443 2155 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 TRANK1O15050 2925 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 IGHV3OR16-9A0A0B4J2B5 98 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 TRGV4A0A0C4DH28 118 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 ETDCA0A1B0GVM5 59 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 A6NED7 52 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 C3orf84H3BNL1 204 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 K7EMT4 169 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 UBE2L6O14933 153 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 HTN1P15515 57 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 COX7BP24311 80 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 LINC00313P59037 77 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 Q9BRP9 147 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 C8orf17Q9NRJ1 99 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 CDC42SE1Q9NRR8 79 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 LOC400499M0QZD8 3231 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 DNAH11Q96DT5 4516 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 PCNX1Q96RV3 2341 aa1.14□□□□□ -2.23
PTP4A1-204ENST00000578299 RP1L1Q8IWN7 2480 aaPredicted RBP1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 VPS13DQ5THJ4 4388 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 TRGV1A0A0A0MS02 117 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 LOC101927531A0A1B0GV80 90 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 H3BUA1 57 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 IGLV6-57P01721 117 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 C9orf116Q5BN46 136 aaPredicted RBP1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 CLPSL2Q6UWE3 100 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 CASC2Q6XLA1 102 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 ADM2Q7Z4H4 148 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 COA5Q86WW8 74 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 Q8IZM0 81 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 B9D2Q9BPU9 175 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 LIMD2Q9BT23 127 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 PLAC8Q9NZF1 115 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 CUBNO60494 3623 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 CNOT1A5YKK6 2376 aaKnown RBP1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 CUL9Q8IWT3 2517 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 DNAH9Q9NYC9 4486 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 DNAH17Q9UFH2 4485 aa1.13□□□□□ -2.23
PTP4A1-204ENST00000578299 DNAH2Q9P225 4427 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 TPRP12270 2363 aaKnown RBP1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 TRRAPQ9Y4A5 3859 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 FRAS1Q86XX4 4008 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 LINC00959A0A1B0GUT2 108 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 A0A1W2PNM2 257 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 H3BQ85 93 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 K7EQZ3 153 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 SPINK7P58062 85 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 DEFB131AP59861 70 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 ELOF1P60002 83 aaKnown RBP1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 LINC01554Q52M75 96 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 SPANXA2-OT1Q8N9U9 137 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 USMG5Q96IX5 58 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 KCNQ1DNQ9H478 68 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 ABCA2Q9BZC7 2435 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 PTPRZ1P23471 2315 aaPredicted RBP1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 MAP1BP46821 2468 aaKnown RBP1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 SORL1Q92673 2214 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 WNK1Q9H4A3 2382 aa1.12□□□□□ -2.23
PTP4A1-204ENST00000578299 APC2O95996 2303 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 DMXL2Q8TDJ6 3036 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 BOD1L1Q8NFC6 3051 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 B4DSR2 109 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 NDUFB1O75438 58 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 MP68P56378 58 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 SPAG11BQ08648 103 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 DEFB109BQ30KR1 87 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 SPINT4Q6UDR6 99 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 C10orf99Q6UWK7 81 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 WFDC13Q8IUB5 93 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 C9orf163Q8N9P6 203 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 LINC00304Q8N9R0 145 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 Q8NAQ8 132 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 WFDC10AQ9H1F0 79 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 LINC01558Q9Y6Z2 57 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 NCOR1O75376 2440 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 DNAH5Q8TE73 4624 aa1.11□□□□□ -2.23
PTP4A1-204ENST00000578299 DYNC2H1Q8NCM8 4307 aaKnown RBP1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 CEP290O15078 2479 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms