RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 C3orf79P0CE67 100 aa3.53□□□□□ -1.84
SMG6-219ENST00000575663 SYCNQ0VAF6 134 aa3.53□□□□□ -1.84
SMG6-219ENST00000575663 C9orf116Q5BN46 136 aaPredicted RBP3.53□□□□□ -1.84
SMG6-219ENST00000575663 LINC01545Q5VT33 79 aa3.53□□□□□ -1.84
SMG6-219ENST00000575663 C2orf66Q6UXQ4 117 aa3.53□□□□□ -1.84
SMG6-219ENST00000575663 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
SMG6-219ENST00000575663 FAM19A2Q8N3H0 131 aa3.53□□□□□ -1.84
SMG6-219ENST00000575663 RPL39LQ96EH5 51 aaKnown RBP3.53□□□□□ -1.84
SMG6-219ENST00000575663 C2orf48Q96LS8 159 aa3.53□□□□□ -1.84
SMG6-219ENST00000575663 A0A1W2PNN7 141 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 TSHBP01222 138 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 COX7CP15954 63 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 PLNP26678 52 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 CXCL5P42830 114 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 NPC2P61916 151 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 MRPS36P82909 103 aaKnown RBP3.52□□□□□ -1.85
SMG6-219ENST00000575663 PHF5AQ7RTV0 110 aaKnown RBP3.52□□□□□ -1.85
SMG6-219ENST00000575663 TEN1Q86WV5 123 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 SCGB3A1Q96QR1 104 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
SMG6-219ENST00000575663 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
SMG6-219ENST00000575663 A0A087WZ39 114 aa3.51□□□□□ -1.85
SMG6-219ENST00000575663 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
SMG6-219ENST00000575663 COX8AP10176 69 aa3.51□□□□□ -1.85
SMG6-219ENST00000575663 XCL1P47992 114 aa3.51□□□□□ -1.85
SMG6-219ENST00000575663 TPRXLQ17RH7 258 aa3.51□□□□□ -1.85
SMG6-219ENST00000575663 TRBV7-7A0A0K0K1E9 115 aa3.5□□□□□ -1.85
SMG6-219ENST00000575663 F8VRH5 84 aa3.5□□□□□ -1.85
SMG6-219ENST00000575663 ATOX1O00244 68 aa3.5□□□□□ -1.85
SMG6-219ENST00000575663 SCGB1C2P0DMR2 95 aa3.5□□□□□ -1.85
SMG6-219ENST00000575663 TRBV7-6A0A0J9YX20 115 aa3.49□□□□□ -1.85
SMG6-219ENST00000575663 E9PLD3 99 aa3.49□□□□□ -1.85
SMG6-219ENST00000575663 H3BT86 120 aa3.49□□□□□ -1.85
SMG6-219ENST00000575663 UBE2BP63146 152 aa3.49□□□□□ -1.85
SMG6-219ENST00000575663 FAM19A3Q7Z5A8 133 aa3.49□□□□□ -1.85
SMG6-219ENST00000575663 CAMK2N2Q96S95 79 aa3.49□□□□□ -1.85
SMG6-219ENST00000575663 AMELXQ99217 191 aa3.49□□□□□ -1.85
SMG6-219ENST00000575663 NDUFS5O43920 106 aa3.48□□□□□ -1.85
SMG6-219ENST00000575663 IGKCP01834 107 aa3.48□□□□□ -1.85
SMG6-219ENST00000575663 CEND1Q8N111 149 aa3.48□□□□□ -1.85
SMG6-219ENST00000575663 RBM12B-AS1Q9P1G2 102 aa3.48□□□□□ -1.85
SMG6-219ENST00000575663 PRO0461Q9UI25 63 aa3.48□□□□□ -1.85
SMG6-219ENST00000575663 UBE2D4Q9Y2X8 147 aa3.48□□□□□ -1.85
SMG6-219ENST00000575663 IGLV4-3A0A075B6K6 122 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.47□□□□□ -1.85
SMG6-219ENST00000575663 IGKV2-29A2NJV5 120 aaPredicted RBP3.47□□□□□ -1.85
SMG6-219ENST00000575663 C11orf86A6NJI1 115 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 LGALS3P17931 250 aaKnown RBP3.47□□□□□ -1.85
SMG6-219ENST00000575663 HERVK_113P61574 105 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 SS18Q15532 418 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 LINC00173Q6ZV60 143 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 TYMSOSQ8TAI1 123 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
SMG6-219ENST00000575663 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 IGLV5-45A0A087WSX0 123 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 LINC00959A0A1B0GUT2 108 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 C8orf87E5RJ46 101 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
SMG6-219ENST00000575663 RPL39P62891 51 aaKnown RBP3.46□□□□□ -1.86
SMG6-219ENST00000575663 SFTA2Q6UW10 78 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 C2orf91Q6ZV80 131 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 DSCR8Q96T75 97 aa3.46□□□□□ -1.86
SMG6-219ENST00000575663 MRPL35Q9NZE8 188 aaKnown RBP3.46□□□□□ -1.86
SMG6-219ENST00000575663 COX7A2LO14548 114 aa3.45□□□□□ -1.86
SMG6-219ENST00000575663 ZNF861PO60384 105 aa3.45□□□□□ -1.86
SMG6-219ENST00000575663 ACYP1P07311 99 aa3.45□□□□□ -1.86
SMG6-219ENST00000575663 ZC2HC1BQ5TFG8 222 aa3.45□□□□□ -1.86
SMG6-219ENST00000575663 FAM104AQ969W3 186 aa3.45□□□□□ -1.86
SMG6-219ENST00000575663 HIGD1BQ9P298 99 aa3.45□□□□□ -1.86
SMG6-219ENST00000575663 A0A087X002 238 aa3.44□□□□□ -1.86
SMG6-219ENST00000575663 FAM168BA1KXE4 195 aa3.44□□□□□ -1.86
SMG6-219ENST00000575663 TCL1BO95988 128 aa3.44□□□□□ -1.86
SMG6-219ENST00000575663 CFC1BP0CG36 223 aa3.44□□□□□ -1.86
SMG6-219ENST00000575663 PSMB2P49721 201 aa3.44□□□□□ -1.86
SMG6-219ENST00000575663 SPAG11BQ08648 103 aa3.44□□□□□ -1.86
SMG6-219ENST00000575663 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
SMG6-219ENST00000575663 OPRPNQ99935 248 aaPredicted RBP3.44□□□□□ -1.86
SMG6-219ENST00000575663 hADV29S1A0JD25 119 aa3.43□□□□□ -1.86
SMG6-219ENST00000575663 TRIAP1O43715 76 aa3.43□□□□□ -1.86
SMG6-219ENST00000575663 TMEM170BQ5T4T1 132 aa3.43□□□□□ -1.86
SMG6-219ENST00000575663 LINC00242Q5T6M2 205 aa3.43□□□□□ -1.86
SMG6-219ENST00000575663 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
SMG6-219ENST00000575663 IGHV3OR16-9A0A0B4J2B5 98 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 TMEM223A0PJW6 202 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 PRYO14603 147 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 NDUFA1O15239 70 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 LEPROTO15243 131 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 TLX1NBP0CAT3 122 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 ZNF22P17026 224 aaPredicted RBP3.42□□□□□ -1.86
SMG6-219ENST00000575663 RPL28P46779 137 aaKnown RBP3.42□□□□□ -1.86
SMG6-219ENST00000575663 SEC61BP60468 96 aaKnown RBP3.42□□□□□ -1.86
SMG6-219ENST00000575663 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 LINC00337Q8N6G1 96 aa3.42□□□□□ -1.86
SMG6-219ENST00000575663 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 247.5 ms