RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
HERPUD1-219ENST00000570273 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
HERPUD1-219ENST00000570273 DIRC1Q969H9 104 aa9.6□□□□□ -0.87
HERPUD1-219ENST00000570273 KIAA1109Q2LD37 5005 aa9.6□□□□□ -0.87
HERPUD1-219ENST00000570273 TRIAP1O43715 76 aa9.59□□□□□ -0.87
HERPUD1-219ENST00000570273 XGP55808 180 aa9.59□□□□□ -0.87
HERPUD1-219ENST00000570273 C6orf99Q4VX62 202 aa9.59□□□□□ -0.87
HERPUD1-219ENST00000570273 C9orf118A6NHY6 69 aa9.58□□□□□ -0.88
HERPUD1-219ENST00000570273 H3BUT2 72 aa9.57□□□□□ -0.88
HERPUD1-219ENST00000570273 ETDCA0A1B0GVM5 59 aa9.56□□□□□ -0.88
HERPUD1-219ENST00000570273 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-219ENST00000570273 SPRR1AP35321 89 aa9.56□□□□□ -0.88
HERPUD1-219ENST00000570273 PSORS1C2Q9UIG4 136 aa9.56□□□□□ -0.88
HERPUD1-219ENST00000570273 COX6CP09669 75 aa9.55□□□□□ -0.88
HERPUD1-219ENST00000570273 SCGB1C2P0DMR2 95 aa9.55□□□□□ -0.88
HERPUD1-219ENST00000570273 COX7BP24311 80 aa9.55□□□□□ -0.88
HERPUD1-219ENST00000570273 VAMP3Q15836 100 aa9.55□□□□□ -0.88
HERPUD1-219ENST00000570273 BCE1O60756 84 aa9.54□□□□□ -0.88
HERPUD1-219ENST00000570273 FAM19A1Q7Z5A9 133 aa9.54□□□□□ -0.88
HERPUD1-219ENST00000570273 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
HERPUD1-219ENST00000570273 KRTAP4-16G5E9R7 235 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-219ENST00000570273 CDK2AP2O75956 126 aa9.53□□□□□ -0.88
HERPUD1-219ENST00000570273 C1orf137Q5JT78 98 aa9.53□□□□□ -0.88
HERPUD1-219ENST00000570273 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
HERPUD1-219ENST00000570273 HERC2O95714 4834 aa9.52□□□□□ -0.88
HERPUD1-219ENST00000570273 HSPG2P98160 4391 aa9.52□□□□□ -0.89
HERPUD1-219ENST00000570273 A0A1W2PPM0 123 aa9.52□□□□□ -0.89
HERPUD1-219ENST00000570273 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-219ENST00000570273 ELOF1P60002 83 aaKnown RBP9.52□□□□□ -0.89
HERPUD1-219ENST00000570273 LINC00528Q8N1L1 170 aa9.52□□□□□ -0.89
HERPUD1-219ENST00000570273 RYR1P21817 5038 aa9.51□□□□□ -0.89
HERPUD1-219ENST00000570273 B5MCH6 92 aa9.51□□□□□ -0.89
HERPUD1-219ENST00000570273 H0YGX0 51 aa9.51□□□□□ -0.89
HERPUD1-219ENST00000570273 FABP2P12104 132 aa9.51□□□□□ -0.89
HERPUD1-219ENST00000570273 UBE2AP49459 152 aa9.51□□□□□ -0.89
HERPUD1-219ENST00000570273 PRLHP81277 87 aa9.5□□□□□ -0.89
HERPUD1-219ENST00000570273 Q6ZRX8 168 aa9.5□□□□□ -0.89
HERPUD1-219ENST00000570273 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
HERPUD1-219ENST00000570273 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
HERPUD1-219ENST00000570273 LINC00575Q6W349 94 aa9.47□□□□□ -0.89
HERPUD1-219ENST00000570273 FAM218AQ96MZ4 157 aa9.47□□□□□ -0.89
HERPUD1-219ENST00000570273 SLC25A20O43772 301 aa9.46□□□□□ -0.9
HERPUD1-219ENST00000570273 IGLV7-43P04211 117 aa9.46□□□□□ -0.9
HERPUD1-219ENST00000570273 Q9BRP9 147 aa9.46□□□□□ -0.9
HERPUD1-219ENST00000570273 HIGD2AQ9BW72 106 aa9.46□□□□□ -0.9
HERPUD1-219ENST00000570273 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.9
HERPUD1-219ENST00000570273 H0Y9J4 135 aa9.45□□□□□ -0.9
HERPUD1-219ENST00000570273 TCL1BO95988 128 aa9.45□□□□□ -0.9
HERPUD1-219ENST00000570273 KRTAP13-1Q8IUC0 172 aa9.45□□□□□ -0.9
HERPUD1-219ENST00000570273 SPCS1Q9Y6A9 102 aa9.45□□□□□ -0.9
HERPUD1-219ENST00000570273 LST1O00453 97 aa9.44□□□□□ -0.9
HERPUD1-219ENST00000570273 SNCGO76070 127 aa9.44□□□□□ -0.9
HERPUD1-219ENST00000570273 INAFM2P0DMQ5 153 aa9.44□□□□□ -0.9
HERPUD1-219ENST00000570273 ATXN8Q156A1 80 aa9.44□□□□□ -0.9
HERPUD1-219ENST00000570273 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
HERPUD1-219ENST00000570273 TRBV20-1A0A075B6N2 111 aa9.43□□□□□ -0.9
HERPUD1-219ENST00000570273 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
HERPUD1-219ENST00000570273 ZNF861PO60384 105 aa9.43□□□□□ -0.9
HERPUD1-219ENST00000570273 A0A1B0GX51 115 aa9.42□□□□□ -0.9
HERPUD1-219ENST00000570273 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
HERPUD1-219ENST00000570273 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
HERPUD1-219ENST00000570273 K7EP34 96 aa9.4□□□□□ -0.9
HERPUD1-219ENST00000570273 ERC2-IT1O76042 136 aa9.4□□□□□ -0.9
HERPUD1-219ENST00000570273 DNAL4O96015 105 aa9.4□□□□□ -0.9
HERPUD1-219ENST00000570273 TRACP01848 142 aa9.4□□□□□ -0.9
HERPUD1-219ENST00000570273 A0A1B0GV90 55 aa9.39□□□□□ -0.91
HERPUD1-219ENST00000570273 PLA2G1BP04054 148 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-219ENST00000570273 Q5VSD8 79 aa9.38□□□□□ -0.91
HERPUD1-219ENST00000570273 Q6ZQY7 126 aa9.38□□□□□ -0.91
HERPUD1-219ENST00000570273 GTF2H5Q6ZYL4 71 aa9.38□□□□□ -0.91
HERPUD1-219ENST00000570273 H3BMG7 143 aa9.37□□□□□ -0.91
HERPUD1-219ENST00000570273 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-219ENST00000570273 KRTAP10-4P60372 401 aaPredicted RBP9.36□□□□□ -0.91
HERPUD1-219ENST00000570273 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
HERPUD1-219ENST00000570273 FAT1Q14517 4588 aa9.35□□□□□ -0.91
HERPUD1-219ENST00000570273 C9JAW5 83 aa9.33□□□□□ -0.92
HERPUD1-219ENST00000570273 Q8N1X5 172 aa9.33□□□□□ -0.92
HERPUD1-219ENST00000570273 DEFB105AQ8NG35 78 aa9.33□□□□□ -0.92
HERPUD1-219ENST00000570273 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
HERPUD1-219ENST00000570273 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-219ENST00000570273 VPS13BQ7Z7G8 4022 aa9.32□□□□□ -0.92
HERPUD1-219ENST00000570273 OCIAD2Q56VL3 154 aa9.31□□□□□ -0.92
HERPUD1-219ENST00000570273 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
HERPUD1-219ENST00000570273 MTURNQ8N3F0 131 aa9.31□□□□□ -0.92
HERPUD1-219ENST00000570273 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
HERPUD1-219ENST00000570273 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
HERPUD1-219ENST00000570273 KRTAP4-5Q9BYR2 181 aa9.31□□□□□ -0.92
HERPUD1-219ENST00000570273 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
HERPUD1-219ENST00000570273 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
HERPUD1-219ENST00000570273 GHRHP01286 108 aa9.29□□□□□ -0.92
HERPUD1-219ENST00000570273 BAALC-AS2P0C853 105 aa9.29□□□□□ -0.92
HERPUD1-219ENST00000570273 TEX49A0A1B0GTD5 131 aa9.28□□□□□ -0.92
HERPUD1-219ENST00000570273 Q8N377 158 aa9.28□□□□□ -0.92
HERPUD1-219ENST00000570273 H3BQ85 93 aa9.27□□□□□ -0.93
HERPUD1-219ENST00000570273 UBE2V1Q13404 147 aa9.27□□□□□ -0.93
HERPUD1-219ENST00000570273 PPDPFLQ8WWR9 84 aa9.27□□□□□ -0.93
HERPUD1-219ENST00000570273 H3BT86 120 aa9.26□□□□□ -0.93
HERPUD1-219ENST00000570273 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
HERPUD1-219ENST00000570273 PCLOQ9Y6V0 5065 aa9.25□□□□□ -0.93
HERPUD1-219ENST00000570273 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms