RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 TOMM7Q9P0U1 55 aa3.21□□□□□ -1.9
HERPUD1-214ENST00000568651 TRBV20OR9-2A0A075B6H5 130 aa3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 TRBV30A0A0K0K1B3 111 aa3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 DAND5Q8N907 189 aa3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 MBD3L1Q8WWY6 194 aa3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 MAP1LC3AQ9H492 121 aa3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 MED9Q9NWA0 146 aa3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-214ENST00000568651 TGIF2-C20orf24A0A0A6YYL0 155 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 TRBV27A0A0K0K1C4 114 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 ARPC5O15511 151 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 LINC00313P59037 77 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 HBBP68871 147 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 RGS21Q2M5E4 152 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 KRTAP13-1Q8IUC0 172 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 SSPOA2VEC9 5147 aa3.19□□□□□ -1.9
HERPUD1-214ENST00000568651 PCOTHQ58A44 107 aa3.18□□□□□ -1.9
HERPUD1-214ENST00000568651 S100ZQ8WXG8 99 aa3.18□□□□□ -1.9
HERPUD1-214ENST00000568651 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
HERPUD1-214ENST00000568651 BIN3Q9NQY0 253 aa3.18□□□□□ -1.9
HERPUD1-214ENST00000568651 USH2AO75445 5202 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 LINC00862A6NCI5 91 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 S100A6P06703 90 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 CKS1BP61024 79 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 HERVK_113P63121 156 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 SPAG11AQ6PDA7 123 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 ATP5L2Q7Z4Y8 100 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 BORCS7Q96B45 105 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 MANBALQ9NQG1 85 aa3.17□□□□□ -1.9
HERPUD1-214ENST00000568651 A0A1B0GVG6 124 aa3.16□□□□□ -1.9
HERPUD1-214ENST00000568651 TMEM238C9JI98 176 aa3.16□□□□□ -1.9
HERPUD1-214ENST00000568651 MRPL51Q4U2R6 128 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-214ENST00000568651 TIMM21Q9BVV7 248 aa3.16□□□□□ -1.9
HERPUD1-214ENST00000568651 TP73-AS1Q9UF72 201 aa3.16□□□□□ -1.9
HERPUD1-214ENST00000568651 UMAD1C9J7I0 102 aa3.15□□□□□ -1.91
HERPUD1-214ENST00000568651 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.91
HERPUD1-214ENST00000568651 PLEKHB2Q96CS7 222 aa3.15□□□□□ -1.91
HERPUD1-214ENST00000568651 TMEM191AQ9H0A3 160 aa3.15□□□□□ -1.91
HERPUD1-214ENST00000568651 SPANXA1Q9NS26 97 aa3.15□□□□□ -1.91
HERPUD1-214ENST00000568651 NDUFA12Q9UI09 145 aa3.15□□□□□ -1.91
HERPUD1-214ENST00000568651 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
HERPUD1-214ENST00000568651 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
HERPUD1-214ENST00000568651 PDE6DO43924 150 aa3.14□□□□□ -1.91
HERPUD1-214ENST00000568651 P0C880 135 aa3.14□□□□□ -1.91
HERPUD1-214ENST00000568651 RAB5BP61020 215 aa3.14□□□□□ -1.91
HERPUD1-214ENST00000568651 CTAG1AP78358 180 aa3.14□□□□□ -1.91
HERPUD1-214ENST00000568651 MRPS36P82909 103 aaKnown RBP3.14□□□□□ -1.91
HERPUD1-214ENST00000568651 ZNF22P17026 224 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-214ENST00000568651 IFI27P40305 119 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-214ENST00000568651 CEBPGP53567 150 aa3.13□□□□□ -1.91
HERPUD1-214ENST00000568651 SPRR4Q96PI1 79 aa3.13□□□□□ -1.91
HERPUD1-214ENST00000568651 BATF3Q9NR55 127 aa3.13□□□□□ -1.91
HERPUD1-214ENST00000568651 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-214ENST00000568651 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-214ENST00000568651 C9orf92A6NGG3 77 aa3.12□□□□□ -1.91
HERPUD1-214ENST00000568651 PPP1R17O96001 155 aa3.12□□□□□ -1.91
HERPUD1-214ENST00000568651 COMMD7Q86VX2 200 aa3.12□□□□□ -1.91
HERPUD1-214ENST00000568651 TMEM126AQ9H061 195 aa3.12□□□□□ -1.91
HERPUD1-214ENST00000568651 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
HERPUD1-214ENST00000568651 KANTRA0A1W2PQU2 76 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 F8VRH5 84 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 M0R378 163 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 SPINK1P00995 79 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 CKS2P33552 79 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 TSPEAR-AS2P59090 65 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 BATFQ16520 125 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 SLC51BQ86UW2 128 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 Q8IZM0 81 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 TMEM141Q96I45 108 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 C2orf88Q9BSF0 95 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 SMIM2Q9BVW6 85 aa3.11□□□□□ -1.91
HERPUD1-214ENST00000568651 A0A1W2PNM2 257 aa3.1□□□□□ -1.91
HERPUD1-214ENST00000568651 D6R8Y8 96 aa3.1□□□□□ -1.91
HERPUD1-214ENST00000568651 NPYP01303 97 aa3.1□□□□□ -1.91
HERPUD1-214ENST00000568651 LINC00299Q6ZSB3 139 aa3.1□□□□□ -1.91
HERPUD1-214ENST00000568651 C20orf78Q9BR46 151 aa3.1□□□□□ -1.91
HERPUD1-214ENST00000568651 CDKN2A-AS1Q9UH64 79 aa3.1□□□□□ -1.91
HERPUD1-214ENST00000568651 RAB14P61106 215 aa3.09□□□□□ -1.91
HERPUD1-214ENST00000568651 Q6Q795 121 aa3.09□□□□□ -1.91
HERPUD1-214ENST00000568651 FAM19A2Q8N3H0 131 aa3.09□□□□□ -1.91
HERPUD1-214ENST00000568651 ZNF345Q14585 488 aa3.08□□□□□ -1.92
HERPUD1-214ENST00000568651 C1orf195Q5TG92 126 aa3.08□□□□□ -1.92
HERPUD1-214ENST00000568651 Q8NDZ9 215 aa3.08□□□□□ -1.92
HERPUD1-214ENST00000568651 SMCR5Q8TEV8 140 aa3.08□□□□□ -1.92
HERPUD1-214ENST00000568651 COX7B2Q8TF08 81 aa3.08□□□□□ -1.92
HERPUD1-214ENST00000568651 SPINK8P0C7L1 97 aa3.07□□□□□ -1.92
HERPUD1-214ENST00000568651 LGALS3P17931 250 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-214ENST00000568651 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
HERPUD1-214ENST00000568651 MRPL54Q6P161 138 aaKnown RBP3.07□□□□□ -1.92
HERPUD1-214ENST00000568651 AKAP14Q86UN6 197 aa3.07□□□□□ -1.92
HERPUD1-214ENST00000568651 AMELXQ99217 191 aa3.07□□□□□ -1.92
HERPUD1-214ENST00000568651 V9GYV3 84 aa3.07□□□□□ -1.92
HERPUD1-214ENST00000568651 A0A1B0GW54 56 aa3.06□□□□□ -1.92
HERPUD1-214ENST00000568651 IGKV4-1P06312 121 aa3.06□□□□□ -1.92
HERPUD1-214ENST00000568651 OSTCQ9NRP0 149 aa3.06□□□□□ -1.92
HERPUD1-214ENST00000568651 NAT8BQ9UHF3 227 aa3.06□□□□□ -1.92
HERPUD1-214ENST00000568651 CYSLTR1Q9Y271 337 aa3.06□□□□□ -1.92
HERPUD1-214ENST00000568651 C9orf153Q5TBE3 101 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms