RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 TRAV23DV6A0A075B6W5 121 aa10.64□□□□□ -0.71
SPSB3-210ENST00000568416 E9PLD3 99 aa10.64□□□□□ -0.71
SPSB3-210ENST00000568416 SLC7A5P1Q8MH63 180 aa10.64□□□□□ -0.71
SPSB3-210ENST00000568416 KRTAP9-6A0A140TA67 174 aa10.63□□□□□ -0.71
SPSB3-210ENST00000568416 NPC2P61916 151 aa10.63□□□□□ -0.71
SPSB3-210ENST00000568416 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
SPSB3-210ENST00000568416 Q8N377 158 aa10.62□□□□□ -0.71
SPSB3-210ENST00000568416 ZNF73O43830 326 aaPredicted RBP10.61□□□□□ -0.71
SPSB3-210ENST00000568416 ASB16-AS1Q495Z4 193 aa10.59□□□□□ -0.71
SPSB3-210ENST00000568416 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
SPSB3-210ENST00000568416 LITAFQ99732 161 aa10.58□□□□□ -0.72
SPSB3-210ENST00000568416 ST20-AS1Q8NBB2 130 aa10.57□□□□□ -0.72
SPSB3-210ENST00000568416 C5orf52A6NGY3 159 aa10.56□□□□□ -0.72
SPSB3-210ENST00000568416 SLC25A20O43772 301 aa10.56□□□□□ -0.72
SPSB3-210ENST00000568416 LINC00308Q8TCZ7 52 aa10.56□□□□□ -0.72
SPSB3-210ENST00000568416 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
SPSB3-210ENST00000568416 CBY1Q9Y3M2 126 aa10.56□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BKO60814 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BJP06899 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BOP23527 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BBP33778 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BDP58876 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BCP62807 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST2H2BEQ16778 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.55□□□□□ -0.72
SPSB3-210ENST00000568416 C9orf153Q5TBE3 101 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BHQ93079 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BNQ99877 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 HIST1H2BMQ99879 126 aa10.55□□□□□ -0.72
SPSB3-210ENST00000568416 TIMM17BO60830 172 aa10.54□□□□□ -0.72
SPSB3-210ENST00000568416 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
SPSB3-210ENST00000568416 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
SPSB3-210ENST00000568416 PET117Q6UWS5 81 aa10.52□□□□□ -0.73
SPSB3-210ENST00000568416 SPRR1BP22528 89 aa10.51□□□□□ -0.73
SPSB3-210ENST00000568416 SEC61BP60468 96 aaKnown RBP10.51□□□□□ -0.73
SPSB3-210ENST00000568416 OR13C6PQ8NH95 151 aa10.51□□□□□ -0.73
SPSB3-210ENST00000568416 KRTAP4-1Q9BYQ7 146 aa10.51□□□□□ -0.73
SPSB3-210ENST00000568416 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
SPSB3-210ENST00000568416 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
SPSB3-210ENST00000568416 TTTY13Q9BZ97 58 aa10.49□□□□□ -0.73
SPSB3-210ENST00000568416 DHRS4-AS1Q9P1J3 65 aa10.48□□□□□ -0.73
SPSB3-210ENST00000568416 XP32Q5T750 250 aa10.47□□□□□ -0.73
SPSB3-210ENST00000568416 C3orf79P0CE67 100 aa10.46□□□□□ -0.73
SPSB3-210ENST00000568416 ELOF1P60002 83 aaKnown RBP10.45□□□□□ -0.74
SPSB3-210ENST00000568416 SLC25A34Q6PIV7 304 aa10.45□□□□□ -0.74
SPSB3-210ENST00000568416 LINC00518Q8N0U6 118 aa10.45□□□□□ -0.74
SPSB3-210ENST00000568416 COX7BP24311 80 aa10.43□□□□□ -0.74
SPSB3-210ENST00000568416 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
SPSB3-210ENST00000568416 LAMTOR3Q9UHA4 124 aa10.42□□□□□ -0.74
SPSB3-210ENST00000568416 COA6Q5JTJ3 125 aaKnown RBP10.41□□□□□ -0.74
SPSB3-210ENST00000568416 LIMD2Q9BT23 127 aa10.41□□□□□ -0.74
SPSB3-210ENST00000568416 LINC01547P58512 204 aaPredicted RBP10.4□□□□□ -0.74
SPSB3-210ENST00000568416 HRCT1Q6UXD1 115 aa10.4□□□□□ -0.74
SPSB3-210ENST00000568416 KRTDAPP60985 99 aa10.39□□□□□ -0.75
SPSB3-210ENST00000568416 TRBV7-6A0A0J9YX20 115 aa10.37□□□□□ -0.75
SPSB3-210ENST00000568416 TAL2Q16559 108 aa10.37□□□□□ -0.75
SPSB3-210ENST00000568416 ANKRD39Q53RE8 183 aa10.37□□□□□ -0.75
SPSB3-210ENST00000568416 SCGB1D4Q6XE38 83 aa10.37□□□□□ -0.75
SPSB3-210ENST00000568416 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
SPSB3-210ENST00000568416 IFITM1P13164 125 aa10.35□□□□□ -0.75
SPSB3-210ENST00000568416 Q1RN00 199 aa10.35□□□□□ -0.75
SPSB3-210ENST00000568416 DEFB105AQ8NG35 78 aa10.35□□□□□ -0.75
SPSB3-210ENST00000568416 C20orf202A1L168 122 aa10.34□□□□□ -0.75
SPSB3-210ENST00000568416 CD164Q04900 197 aa10.34□□□□□ -0.75
SPSB3-210ENST00000568416 PRO1933Q9H354 126 aa10.34□□□□□ -0.75
SPSB3-210ENST00000568416 A0A1B0GWB2 263 aa10.33□□□□□ -0.76
SPSB3-210ENST00000568416 SMIM29Q86T20 159 aa10.33□□□□□ -0.76
SPSB3-210ENST00000568416 COPS9Q8WXC6 57 aa10.33□□□□□ -0.76
SPSB3-210ENST00000568416 Q6ZVH6 145 aa10.32□□□□□ -0.76
SPSB3-210ENST00000568416 IGLV5-48A0A075B6I7 105 aa10.31□□□□□ -0.76
SPSB3-210ENST00000568416 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
SPSB3-210ENST00000568416 ATOH7Q8N100 152 aa10.31□□□□□ -0.76
SPSB3-210ENST00000568416 A6NDN8 102 aa10.3□□□□□ -0.76
SPSB3-210ENST00000568416 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
SPSB3-210ENST00000568416 H7C2G1 150 aa10.29□□□□□ -0.76
SPSB3-210ENST00000568416 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
SPSB3-210ENST00000568416 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
SPSB3-210ENST00000568416 Q5XG85 94 aa10.28□□□□□ -0.76
SPSB3-210ENST00000568416 AKR1D1P51857 326 aa10.27□□□□□ -0.77
SPSB3-210ENST00000568416 A4D1N5 150 aa10.26□□□□□ -0.77
SPSB3-210ENST00000568416 PCOTHQ58A44 107 aa10.26□□□□□ -0.77
SPSB3-210ENST00000568416 KRTAP19-2Q3LHN2 52 aa10.25□□□□□ -0.77
SPSB3-210ENST00000568416 TRAV13-2A0A0B4J235 113 aa10.24□□□□□ -0.77
SPSB3-210ENST00000568416 A0A0G2JQZ4 141 aa10.24□□□□□ -0.77
SPSB3-210ENST00000568416 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
SPSB3-210ENST00000568416 C1orf195Q5TG92 126 aa10.23□□□□□ -0.77
SPSB3-210ENST00000568416 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
SPSB3-210ENST00000568416 SNRPEP62304 92 aaKnown RBP10.22□□□□□ -0.77
SPSB3-210ENST00000568416 NHP2Q9NX24 153 aaKnown RBP10.22□□□□□ -0.77
SPSB3-210ENST00000568416 LCE2DQ5TA82 110 aaPredicted RBP10.2□□□□□ -0.78
SPSB3-210ENST00000568416 MT1HP80294 61 aa10.15□□□□□ -0.78
SPSB3-210ENST00000568416 LINC00575Q6W349 94 aa10.14□□□□□ -0.79
SPSB3-210ENST00000568416 HIST3H2BBQ8N257 126 aa10.14□□□□□ -0.79
SPSB3-210ENST00000568416 VAMP3Q15836 100 aa10.13□□□□□ -0.79
SPSB3-210ENST00000568416 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
SPSB3-210ENST00000568416 TCL1BO95988 128 aa10.12□□□□□ -0.79
SPSB3-210ENST00000568416 RPL37P61927 97 aaKnown RBP10.12□□□□□ -0.79
SPSB3-210ENST00000568416 F8WEM9 126 aa10.11□□□□□ -0.79
SPSB3-210ENST00000568416 Q6ZQY7 126 aa10.1□□□□□ -0.79
SPSB3-210ENST00000568416 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms