RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IGKV2-28A0A075B6P5 120 aa10.97□□□□□ -0.65
LINC01238-205ENST00000567549 A0A087X002 238 aa10.97□□□□□ -0.65
LINC01238-205ENST00000567549 IGKV2D-28P01615 120 aa10.97□□□□□ -0.65
LINC01238-205ENST00000567549 Q6ZVH6 145 aa10.97□□□□□ -0.65
LINC01238-205ENST00000567549 A6NDN8 102 aa10.96□□□□□ -0.65
LINC01238-205ENST00000567549 ZNF625Q96I27 306 aaPredicted RBP10.96□□□□□ -0.65
LINC01238-205ENST00000567549 KRTAP13-1Q8IUC0 172 aa10.95□□□□□ -0.66
LINC01238-205ENST00000567549 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
LINC01238-205ENST00000567549 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
LINC01238-205ENST00000567549 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
LINC01238-205ENST00000567549 LPAP08519 4548 aa10.94□□□□□ -0.66
LINC01238-205ENST00000567549 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
LINC01238-205ENST00000567549 A6NJY4 79 aa10.93□□□□□ -0.66
LINC01238-205ENST00000567549 COPS9Q8WXC6 57 aa10.93□□□□□ -0.66
LINC01238-205ENST00000567549 SPANXDQ9BXN6 97 aa10.93□□□□□ -0.66
LINC01238-205ENST00000567549 SPANXCQ9NY87 97 aa10.93□□□□□ -0.66
LINC01238-205ENST00000567549 TMEM126AQ9H061 195 aa10.92□□□□□ -0.66
LINC01238-205ENST00000567549 VPREB1P12018 145 aa10.91□□□□□ -0.66
LINC01238-205ENST00000567549 IFITM1P13164 125 aa10.91□□□□□ -0.66
LINC01238-205ENST00000567549 MEIG1Q5JSS6 88 aa10.91□□□□□ -0.66
LINC01238-205ENST00000567549 LITAFQ99732 161 aa10.9□□□□□ -0.66
LINC01238-205ENST00000567549 SMIM13P0DJ93 91 aa10.89□□□□□ -0.67
LINC01238-205ENST00000567549 FXYD2P54710 66 aa10.89□□□□□ -0.67
LINC01238-205ENST00000567549 PRLHP81277 87 aa10.89□□□□□ -0.67
LINC01238-205ENST00000567549 PPDPFQ9H3Y8 114 aa10.88□□□□□ -0.67
LINC01238-205ENST00000567549 ZNF706Q9Y5V0 76 aaPredicted RBP10.88□□□□□ -0.67
LINC01238-205ENST00000567549 SMCPP49901 116 aaPredicted RBP10.87□□□□□ -0.67
LINC01238-205ENST00000567549 LINC00158P58513 81 aa10.87□□□□□ -0.67
LINC01238-205ENST00000567549 KRTAP13-2Q52LG2 175 aa10.87□□□□□ -0.67
LINC01238-205ENST00000567549 ADAMTSL4-AS1Q5T5F5 129 aa10.87□□□□□ -0.67
LINC01238-205ENST00000567549 MUSTN1Q8IVN3 82 aa10.87□□□□□ -0.67
LINC01238-205ENST00000567549 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
LINC01238-205ENST00000567549 SPAG11AQ6PDA7 123 aa10.86□□□□□ -0.67
LINC01238-205ENST00000567549 M0R378 163 aa10.85□□□□□ -0.67
LINC01238-205ENST00000567549 A0A1B0GWB2 263 aa10.84□□□□□ -0.67
LINC01238-205ENST00000567549 CDIP1Q9H305 208 aa10.84□□□□□ -0.67
LINC01238-205ENST00000567549 NHP2Q9NX24 153 aaKnown RBP10.84□□□□□ -0.67
LINC01238-205ENST00000567549 TPRXLQ17RH7 258 aa10.83□□□□□ -0.68
LINC01238-205ENST00000567549 HIGD2AQ9BW72 106 aa10.83□□□□□ -0.68
LINC01238-205ENST00000567549 TAX1BP3O14907 124 aa10.82□□□□□ -0.68
LINC01238-205ENST00000567549 LINC00308Q8TCZ7 52 aa10.82□□□□□ -0.68
LINC01238-205ENST00000567549 A0A0U1RRA0 63 aa10.81□□□□□ -0.68
LINC01238-205ENST00000567549 A4D1N5 150 aa10.81□□□□□ -0.68
LINC01238-205ENST00000567549 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
LINC01238-205ENST00000567549 PRYO14603 147 aa10.79□□□□□ -0.68
LINC01238-205ENST00000567549 MIR7-3HGQ8N6C7 128 aa10.79□□□□□ -0.68
LINC01238-205ENST00000567549 RETNLBQ9BQ08 111 aa10.79□□□□□ -0.68
LINC01238-205ENST00000567549 A0A0B4J2C4 111 aa10.78□□□□□ -0.68
LINC01238-205ENST00000567549 C9orf118A6NHY6 69 aa10.78□□□□□ -0.68
LINC01238-205ENST00000567549 CFC1BP0CG36 223 aa10.78□□□□□ -0.68
LINC01238-205ENST00000567549 CFC1P0CG37 223 aa10.78□□□□□ -0.68
LINC01238-205ENST00000567549 DAND5Q8N907 189 aa10.78□□□□□ -0.68
LINC01238-205ENST00000567549 RAB37Q96AX2 223 aa10.78□□□□□ -0.68
LINC01238-205ENST00000567549 PRO1854Q9UHT4 67 aa10.77□□□□□ -0.69
LINC01238-205ENST00000567549 A0A1B0GV90 55 aa10.76□□□□□ -0.69
LINC01238-205ENST00000567549 SPRR4Q96PI1 79 aa10.76□□□□□ -0.69
LINC01238-205ENST00000567549 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
LINC01238-205ENST00000567549 ETDCA0A1B0GVM5 59 aa10.75□□□□□ -0.69
LINC01238-205ENST00000567549 K7ERJ3 54 aa10.75□□□□□ -0.69
LINC01238-205ENST00000567549 NPC2P61916 151 aa10.75□□□□□ -0.69
LINC01238-205ENST00000567549 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
LINC01238-205ENST00000567549 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
LINC01238-205ENST00000567549 LINC00337Q8N6G1 96 aa10.75□□□□□ -0.69
LINC01238-205ENST00000567549 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
LINC01238-205ENST00000567549 C3orf22Q8N5N4 141 aa10.73□□□□□ -0.69
LINC01238-205ENST00000567549 Q8NDZ9 215 aa10.72□□□□□ -0.69
LINC01238-205ENST00000567549 KCNQ1DNQ9H478 68 aa10.72□□□□□ -0.69
LINC01238-205ENST00000567549 MUC2Q02817 5179 aa10.72□□□□□ -0.69
LINC01238-205ENST00000567549 H3BUT2 72 aa10.71□□□□□ -0.69
LINC01238-205ENST00000567549 EIF4EBP3O60516 100 aaPredicted RBP10.71□□□□□ -0.69
LINC01238-205ENST00000567549 TRAV13-2A0A0B4J235 113 aa10.69□□□□□ -0.7
LINC01238-205ENST00000567549 NCR3O14931 201 aa10.69□□□□□ -0.7
LINC01238-205ENST00000567549 NDUFC2O95298 119 aa10.69□□□□□ -0.7
LINC01238-205ENST00000567549 SPINK1P00995 79 aa10.69□□□□□ -0.7
LINC01238-205ENST00000567549 FABP2P12104 132 aa10.69□□□□□ -0.7
LINC01238-205ENST00000567549 SPRR1AP35321 89 aa10.69□□□□□ -0.7
LINC01238-205ENST00000567549 VAMP3Q15836 100 aa10.69□□□□□ -0.7
LINC01238-205ENST00000567549 A0A1W2PPM0 123 aa10.68□□□□□ -0.7
LINC01238-205ENST00000567549 LCE2BO14633 110 aa10.67□□□□□ -0.7
LINC01238-205ENST00000567549 LYRM7Q5U5X0 104 aa10.67□□□□□ -0.7
LINC01238-205ENST00000567549 SMCR5Q8TEV8 140 aa10.66□□□□□ -0.7
LINC01238-205ENST00000567549 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.7
LINC01238-205ENST00000567549 GTF2H5Q6ZYL4 71 aa10.65□□□□□ -0.7
LINC01238-205ENST00000567549 Q8NBF4 154 aa10.65□□□□□ -0.7
LINC01238-205ENST00000567549 CBY1Q9Y3M2 126 aa10.65□□□□□ -0.7
LINC01238-205ENST00000567549 TRBV10-3A0A0K0K1G6 114 aa10.64□□□□□ -0.71
LINC01238-205ENST00000567549 Q1RN00 199 aa10.64□□□□□ -0.71
LINC01238-205ENST00000567549 NAA38Q9BRA0 125 aaKnown RBP10.64□□□□□ -0.71
LINC01238-205ENST00000567549 PSMB2P49721 201 aa10.63□□□□□ -0.71
LINC01238-205ENST00000567549 H7C2G1 150 aa10.62□□□□□ -0.71
LINC01238-205ENST00000567549 COX6CP09669 75 aa10.62□□□□□ -0.71
LINC01238-205ENST00000567549 SCGB1C2P0DMR2 95 aa10.62□□□□□ -0.71
LINC01238-205ENST00000567549 RPS29P62273 56 aaKnown RBP10.62□□□□□ -0.71
LINC01238-205ENST00000567549 LINC00483Q53H64 154 aa10.62□□□□□ -0.71
LINC01238-205ENST00000567549 KRTAP4-16G5E9R7 235 aaPredicted RBP10.61□□□□□ -0.71
LINC01238-205ENST00000567549 UBE2V1Q13404 147 aa10.61□□□□□ -0.71
LINC01238-205ENST00000567549 S100A7L2Q5SY68 101 aa10.61□□□□□ -0.71
LINC01238-205ENST00000567549 SSBP3-AS1Q7Z2R9 100 aa10.61□□□□□ -0.71
LINC01238-205ENST00000567549 SPCS1Q9Y6A9 102 aa10.61□□□□□ -0.71
LINC01238-205ENST00000567549 GAGE2AQ6NT46 116 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms