RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TRBV10-3A0A0K0K1G6 114 aa10.23□□□□□ -0.77
CLN6-208ENST00000567060 LOC105371267A0A1B0GV96 52 aa10.23□□□□□ -0.77
CLN6-208ENST00000567060 RPL28P46779 137 aaKnown RBP10.23□□□□□ -0.77
CLN6-208ENST00000567060 ZNF861PO60384 105 aa10.22□□□□□ -0.77
CLN6-208ENST00000567060 SPRR1AP35321 89 aa10.22□□□□□ -0.77
CLN6-208ENST00000567060 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
CLN6-208ENST00000567060 UQCR10Q9UDW1 63 aa10.22□□□□□ -0.77
CLN6-208ENST00000567060 TRAV13-2A0A0B4J235 113 aa10.21□□□□□ -0.77
CLN6-208ENST00000567060 H0Y9J4 135 aa10.21□□□□□ -0.77
CLN6-208ENST00000567060 C2orf91Q6ZV80 131 aa10.21□□□□□ -0.77
CLN6-208ENST00000567060 DIRC1Q969H9 104 aa10.21□□□□□ -0.77
CLN6-208ENST00000567060 UBE2AP49459 152 aa10.19□□□□□ -0.78
CLN6-208ENST00000567060 HNRNPA3P51991 378 aaKnown RBP10.19□□□□□ -0.78
CLN6-208ENST00000567060 TRAV23DV6A0A075B6W5 121 aa10.18□□□□□ -0.78
CLN6-208ENST00000567060 OR13C6PQ8NH95 151 aa10.18□□□□□ -0.78
CLN6-208ENST00000567060 A4D1N5 150 aa10.17□□□□□ -0.78
CLN6-208ENST00000567060 FAM19A1Q7Z5A9 133 aa10.17□□□□□ -0.78
CLN6-208ENST00000567060 KRTAP13-1Q8IUC0 172 aa10.17□□□□□ -0.78
CLN6-208ENST00000567060 TMEM238LA0A1B0GVL6 79 aa10.16□□□□□ -0.78
CLN6-208ENST00000567060 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
CLN6-208ENST00000567060 A6NJY4 79 aa10.16□□□□□ -0.78
CLN6-208ENST00000567060 KRTAP4-16G5E9R7 235 aaPredicted RBP10.16□□□□□ -0.78
CLN6-208ENST00000567060 MT1HL1P0DM35 61 aa10.16□□□□□ -0.78
CLN6-208ENST00000567060 HINT1P49773 126 aaPredicted RBP10.16□□□□□ -0.78
CLN6-208ENST00000567060 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.78
CLN6-208ENST00000567060 HSD52Q0P140 79 aa10.14□□□□□ -0.79
CLN6-208ENST00000567060 CEND1Q8N111 149 aa10.14□□□□□ -0.79
CLN6-208ENST00000567060 A6NDN8 102 aa10.13□□□□□ -0.79
CLN6-208ENST00000567060 TRBV7-6A0A0J9YX20 115 aa10.12□□□□□ -0.79
CLN6-208ENST00000567060 PRLHP81277 87 aa10.11□□□□□ -0.79
CLN6-208ENST00000567060 Q6ZRX8 168 aa10.11□□□□□ -0.79
CLN6-208ENST00000567060 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
CLN6-208ENST00000567060 B5MCH6 92 aa10.1□□□□□ -0.79
CLN6-208ENST00000567060 C12orf57Q99622 126 aa10.1□□□□□ -0.79
CLN6-208ENST00000567060 TSTD3H0UI37 97 aa10.09□□□□□ -0.79
CLN6-208ENST00000567060 C6orf99Q4VX62 202 aa10.07□□□□□ -0.8
CLN6-208ENST00000567060 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
CLN6-208ENST00000567060 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
CLN6-208ENST00000567060 A0A1B0GWB2 263 aa10.06□□□□□ -0.8
CLN6-208ENST00000567060 CFC1BP0CG36 223 aa10.06□□□□□ -0.8
CLN6-208ENST00000567060 CFC1P0CG37 223 aa10.06□□□□□ -0.8
CLN6-208ENST00000567060 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
CLN6-208ENST00000567060 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
CLN6-208ENST00000567060 HIGD2AQ9BW72 106 aa10.06□□□□□ -0.8
CLN6-208ENST00000567060 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
CLN6-208ENST00000567060 PRO1933Q9H354 126 aa10.05□□□□□ -0.8
CLN6-208ENST00000567060 DHRS4-AS1Q9P1J3 65 aa10.05□□□□□ -0.8
CLN6-208ENST00000567060 COX7BP24311 80 aa10.04□□□□□ -0.8
CLN6-208ENST00000567060 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
CLN6-208ENST00000567060 FXYD2P54710 66 aa10.04□□□□□ -0.8
CLN6-208ENST00000567060 VAMP3Q15836 100 aa10.04□□□□□ -0.8
CLN6-208ENST00000567060 SMCR5Q8TEV8 140 aa10.03□□□□□ -0.8
CLN6-208ENST00000567060 PRO1854Q9UHT4 67 aa10.03□□□□□ -0.8
CLN6-208ENST00000567060 M0R143 59 aa10.02□□□□□ -0.81
CLN6-208ENST00000567060 KRTAP1-4P0C5Y4 121 aa10.02□□□□□ -0.81
CLN6-208ENST00000567060 FAM229BQ4G0N7 80 aa10.02□□□□□ -0.81
CLN6-208ENST00000567060 BVES-AS1Q5T3Y7 98 aa10.02□□□□□ -0.81
CLN6-208ENST00000567060 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
CLN6-208ENST00000567060 Q9BRP9 147 aa10.01□□□□□ -0.81
CLN6-208ENST00000567060 SPRR4Q96PI1 79 aa9.98□□□□□ -0.81
CLN6-208ENST00000567060 SLC25A20O43772 301 aa9.97□□□□□ -0.81
CLN6-208ENST00000567060 CRYGAP11844 174 aa9.97□□□□□ -0.81
CLN6-208ENST00000567060 CTAG1AP78358 180 aa9.96□□□□□ -0.82
CLN6-208ENST00000567060 H0YGX0 51 aa9.95□□□□□ -0.82
CLN6-208ENST00000567060 Q1RN00 199 aa9.95□□□□□ -0.82
CLN6-208ENST00000567060 LINC00483Q53H64 154 aa9.95□□□□□ -0.82
CLN6-208ENST00000567060 ERC2-IT1O76042 136 aa9.94□□□□□ -0.82
CLN6-208ENST00000567060 SNCGO76070 127 aa9.94□□□□□ -0.82
CLN6-208ENST00000567060 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
CLN6-208ENST00000567060 H7C2G1 150 aa9.93□□□□□ -0.82
CLN6-208ENST00000567060 LINC00575Q6W349 94 aa9.92□□□□□ -0.82
CLN6-208ENST00000567060 SPRR1BP22528 89 aa9.91□□□□□ -0.82
CLN6-208ENST00000567060 PRR26Q8N8Z3 221 aa9.91□□□□□ -0.82
CLN6-208ENST00000567060 LPAP08519 4548 aa9.91□□□□□ -0.82
CLN6-208ENST00000567060 A0A1B0GX51 115 aa9.9□□□□□ -0.82
CLN6-208ENST00000567060 COX6CP09669 75 aa9.9□□□□□ -0.82
CLN6-208ENST00000567060 hADV29S1A0JD25 119 aa9.89□□□□□ -0.83
CLN6-208ENST00000567060 GAGE2AQ6NT46 116 aa9.89□□□□□ -0.83
CLN6-208ENST00000567060 A0A087X002 238 aa9.88□□□□□ -0.83
CLN6-208ENST00000567060 K7ERJ3 54 aa9.88□□□□□ -0.83
CLN6-208ENST00000567060 IGLV5-48A0A075B6I7 105 aa9.87□□□□□ -0.83
CLN6-208ENST00000567060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
CLN6-208ENST00000567060 TYMSOSQ8TAI1 123 aa9.87□□□□□ -0.83
CLN6-208ENST00000567060 TEX49A0A1B0GTD5 131 aa9.86□□□□□ -0.83
CLN6-208ENST00000567060 TSPAN13O95857 204 aa9.86□□□□□ -0.83
CLN6-208ENST00000567060 GHRHP01286 108 aa9.86□□□□□ -0.83
CLN6-208ENST00000567060 PSMB2P49721 201 aa9.86□□□□□ -0.83
CLN6-208ENST00000567060 TRIAP1O43715 76 aa9.85□□□□□ -0.83
CLN6-208ENST00000567060 OCIAD2Q56VL3 154 aa9.85□□□□□ -0.83
CLN6-208ENST00000567060 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
CLN6-208ENST00000567060 PPDPFLQ8WWR9 84 aa9.85□□□□□ -0.83
CLN6-208ENST00000567060 ANAPC11Q9NYG5 84 aa9.85□□□□□ -0.83
CLN6-208ENST00000567060 KRTAP13-2Q52LG2 175 aa9.83□□□□□ -0.84
CLN6-208ENST00000567060 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
CLN6-208ENST00000567060 SSBP3-AS1Q7Z2R9 100 aa9.82□□□□□ -0.84
CLN6-208ENST00000567060 Q6ZQY7 126 aa9.81□□□□□ -0.84
CLN6-208ENST00000567060 H3BQ85 93 aa9.8□□□□□ -0.84
CLN6-208ENST00000567060 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
CLN6-208ENST00000567060 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
CLN6-208ENST00000567060 LYRM7Q5U5X0 104 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms