RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
ABCA3-204ENST00000566200 MIEN1Q9BRT3 115 aa10.37□□□□□ -0.75
ABCA3-204ENST00000566200 TRGC2P03986 189 aa10.36□□□□□ -0.75
ABCA3-204ENST00000566200 NMUP48645 174 aa10.36□□□□□ -0.75
ABCA3-204ENST00000566200 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
ABCA3-204ENST00000566200 C9orf153Q5TBE3 101 aa10.36□□□□□ -0.75
ABCA3-204ENST00000566200 DPM2O94777 84 aa10.35□□□□□ -0.75
ABCA3-204ENST00000566200 NPC2P61916 151 aa10.35□□□□□ -0.75
ABCA3-204ENST00000566200 ZNF73O43830 326 aaPredicted RBP10.34□□□□□ -0.75
ABCA3-204ENST00000566200 LGALS3P17931 250 aaKnown RBP10.34□□□□□ -0.75
ABCA3-204ENST00000566200 JOSD1Q15040 202 aaPredicted RBP10.34□□□□□ -0.75
ABCA3-204ENST00000566200 IGKCP01834 107 aa10.33□□□□□ -0.76
ABCA3-204ENST00000566200 FABP4P15090 132 aa10.33□□□□□ -0.76
ABCA3-204ENST00000566200 HERVK_113P61574 105 aa10.33□□□□□ -0.76
ABCA3-204ENST00000566200 KRTAP19-2Q3LHN2 52 aa10.33□□□□□ -0.76
ABCA3-204ENST00000566200 A0A0J9YXY3 114 aa10.32□□□□□ -0.76
ABCA3-204ENST00000566200 HSPB8Q9UJY1 196 aa10.31□□□□□ -0.76
ABCA3-204ENST00000566200 C5orf52A6NGY3 159 aa10.28□□□□□ -0.76
ABCA3-204ENST00000566200 SPRR1BP22528 89 aa10.28□□□□□ -0.76
ABCA3-204ENST00000566200 E9PLD3 99 aa10.27□□□□□ -0.77
ABCA3-204ENST00000566200 LITAFQ99732 161 aa10.27□□□□□ -0.77
ABCA3-204ENST00000566200 FSIP2Q5CZC0 6907 aa10.26□□□□□ -0.77
ABCA3-204ENST00000566200 HRCT1Q6UXD1 115 aa10.24□□□□□ -0.77
ABCA3-204ENST00000566200 LINC00308Q8TCZ7 52 aa10.24□□□□□ -0.77
ABCA3-204ENST00000566200 MT1HP80294 61 aa10.23□□□□□ -0.77
ABCA3-204ENST00000566200 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
ABCA3-204ENST00000566200 HINT1P49773 126 aaPredicted RBP10.22□□□□□ -0.77
ABCA3-204ENST00000566200 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
ABCA3-204ENST00000566200 SPANXCQ9NY87 97 aa10.22□□□□□ -0.77
ABCA3-204ENST00000566200 CRCT1Q9UGL9 99 aa10.22□□□□□ -0.77
ABCA3-204ENST00000566200 C9orf92A6NGG3 77 aa10.21□□□□□ -0.77
ABCA3-204ENST00000566200 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
ABCA3-204ENST00000566200 DHRS4-AS1Q9P1J3 65 aa10.2□□□□□ -0.78
ABCA3-204ENST00000566200 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
ABCA3-204ENST00000566200 IGLV8-61A0A075B6I0 122 aa10.19□□□□□ -0.78
ABCA3-204ENST00000566200 COLCA2A8K830 154 aa10.19□□□□□ -0.78
ABCA3-204ENST00000566200 TIMM17BO60830 172 aa10.18□□□□□ -0.78
ABCA3-204ENST00000566200 SLC25A34Q6PIV7 304 aa10.18□□□□□ -0.78
ABCA3-204ENST00000566200 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
ABCA3-204ENST00000566200 SYS1-DBNDD2H3BUS1 97 aa10.17□□□□□ -0.78
ABCA3-204ENST00000566200 ELOF1P60002 83 aaKnown RBP10.17□□□□□ -0.78
ABCA3-204ENST00000566200 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
ABCA3-204ENST00000566200 LAMTOR3Q9UHA4 124 aa10.17□□□□□ -0.78
ABCA3-204ENST00000566200 Q1RN00 199 aa10.15□□□□□ -0.78
ABCA3-204ENST00000566200 C6orf99Q4VX62 202 aa10.15□□□□□ -0.78
ABCA3-204ENST00000566200 TTTY13Q9BZ97 58 aa10.15□□□□□ -0.78
ABCA3-204ENST00000566200 COX7BP24311 80 aa10.14□□□□□ -0.79
ABCA3-204ENST00000566200 CD164Q04900 197 aa10.13□□□□□ -0.79
ABCA3-204ENST00000566200 ZNF815PA8K554 130 aa10.12□□□□□ -0.79
ABCA3-204ENST00000566200 LINC01545Q5VT33 79 aa10.12□□□□□ -0.79
ABCA3-204ENST00000566200 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
ABCA3-204ENST00000566200 DEFB105AQ8NG35 78 aa10.12□□□□□ -0.79
ABCA3-204ENST00000566200 H7C2G1 150 aa10.11□□□□□ -0.79
ABCA3-204ENST00000566200 TAL2Q16559 108 aa10.11□□□□□ -0.79
ABCA3-204ENST00000566200 PRO1933Q9H354 126 aa10.1□□□□□ -0.79
ABCA3-204ENST00000566200 A0A0G2JQZ4 141 aa10.09□□□□□ -0.79
ABCA3-204ENST00000566200 TEX49A0A1B0GTD5 131 aa10.09□□□□□ -0.79
ABCA3-204ENST00000566200 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
ABCA3-204ENST00000566200 Q5XG85 94 aa10.09□□□□□ -0.79
ABCA3-204ENST00000566200 HIST1H2BKO60814 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BJP06899 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 CFC1BP0CG36 223 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BOP23527 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BBP33778 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BDP58876 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BCP62807 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST2H2BEQ16778 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-204ENST00000566200 C1orf195Q5TG92 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 LINC00518Q8N0U6 118 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BHQ93079 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BNQ99877 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 HIST1H2BMQ99879 126 aa10.08□□□□□ -0.8
ABCA3-204ENST00000566200 KRTAP10-6P60371 365 aaPredicted RBP10.07□□□□□ -0.8
ABCA3-204ENST00000566200 PET117Q6UWS5 81 aa10.06□□□□□ -0.8
ABCA3-204ENST00000566200 IGLV5-48A0A075B6I7 105 aa10.05□□□□□ -0.8
ABCA3-204ENST00000566200 TRBV7-6A0A0J9YX20 115 aa10.05□□□□□ -0.8
ABCA3-204ENST00000566200 AKR1D1P51857 326 aa10.04□□□□□ -0.8
ABCA3-204ENST00000566200 C3orf79P0CE67 100 aa10.03□□□□□ -0.8
ABCA3-204ENST00000566200 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
ABCA3-204ENST00000566200 FLGP20930 4061 aaPredicted RBP10.03□□□□□ -0.8
ABCA3-204ENST00000566200 A0A1B0GWB2 263 aa10.02□□□□□ -0.81
ABCA3-204ENST00000566200 ANKRD39Q53RE8 183 aa9.98□□□□□ -0.81
ABCA3-204ENST00000566200 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
ABCA3-204ENST00000566200 A6NDN8 102 aa9.97□□□□□ -0.81
ABCA3-204ENST00000566200 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
ABCA3-204ENST00000566200 IFITM1P13164 125 aa9.95□□□□□ -0.82
ABCA3-204ENST00000566200 MUSTN1Q8IVN3 82 aa9.95□□□□□ -0.82
ABCA3-204ENST00000566200 KRTDAPP60985 99 aa9.94□□□□□ -0.82
ABCA3-204ENST00000566200 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
ABCA3-204ENST00000566200 A4D1N5 150 aa9.92□□□□□ -0.82
ABCA3-204ENST00000566200 M0R2T5 61 aa9.92□□□□□ -0.82
ABCA3-204ENST00000566200 Q6ZVH6 145 aa9.92□□□□□ -0.82
ABCA3-204ENST00000566200 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
ABCA3-204ENST00000566200 COPS9Q8WXC6 57 aa9.92□□□□□ -0.82
ABCA3-204ENST00000566200 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
ABCA3-204ENST00000566200 ATOH7Q8N100 152 aa9.91□□□□□ -0.82
ABCA3-204ENST00000566200 COX6B2Q6YFQ2 88 aa9.9□□□□□ -0.82
ABCA3-204ENST00000566200 TCL1BO95988 128 aa9.89□□□□□ -0.83
ABCA3-204ENST00000566200 NHP2Q9NX24 153 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms