RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TRBV10-3A0A0K0K1G6 114 aa6.98□□□□□ -1.29
SF3B3-205ENST00000564899 IGLV6-57P01721 117 aa6.98□□□□□ -1.29
SF3B3-205ENST00000564899 HAMPP81172 84 aa6.98□□□□□ -1.29
SF3B3-205ENST00000564899 LBHQ53QV2 105 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-205ENST00000564899 Q6ZSA8 131 aa6.98□□□□□ -1.29
SF3B3-205ENST00000564899 FAM30AQ9NZY2 134 aa6.98□□□□□ -1.29
SF3B3-205ENST00000564899 TAX1BP3O14907 124 aa6.97□□□□□ -1.29
SF3B3-205ENST00000564899 TSPAN13O95857 204 aa6.97□□□□□ -1.29
SF3B3-205ENST00000564899 SMR3BP02814 79 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-205ENST00000564899 PHF5AQ7RTV0 110 aaKnown RBP6.97□□□□□ -1.29
SF3B3-205ENST00000564899 LINC00167Q96N53 147 aa6.97□□□□□ -1.29
SF3B3-205ENST00000564899 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
SF3B3-205ENST00000564899 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
SF3B3-205ENST00000564899 TRAV23DV6A0A075B6W5 121 aa6.95□□□□□ -1.3
SF3B3-205ENST00000564899 RPL37AP8A6NKH3 93 aa6.95□□□□□ -1.3
SF3B3-205ENST00000564899 UBE2BP63146 152 aa6.95□□□□□ -1.3
SF3B3-205ENST00000564899 SMIM11BQ8TCY0 68 aa6.95□□□□□ -1.3
SF3B3-205ENST00000564899 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
SF3B3-205ENST00000564899 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
SF3B3-205ENST00000564899 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
SF3B3-205ENST00000564899 PSMB2P49721 201 aa6.94□□□□□ -1.3
SF3B3-205ENST00000564899 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
SF3B3-205ENST00000564899 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
SF3B3-205ENST00000564899 C9orf118A6NHY6 69 aa6.93□□□□□ -1.3
SF3B3-205ENST00000564899 H3BUT2 72 aa6.93□□□□□ -1.3
SF3B3-205ENST00000564899 PRYO14603 147 aa6.93□□□□□ -1.3
SF3B3-205ENST00000564899 RPL28P46779 137 aaKnown RBP6.93□□□□□ -1.3
SF3B3-205ENST00000564899 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
SF3B3-205ENST00000564899 TRIAP1O43715 76 aa6.92□□□□□ -1.3
SF3B3-205ENST00000564899 DIRC1Q969H9 104 aa6.92□□□□□ -1.3
SF3B3-205ENST00000564899 ZNF73O43830 326 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-205ENST00000564899 C6orf99Q4VX62 202 aa6.91□□□□□ -1.3
SF3B3-205ENST00000564899 A0A1W2PPM0 123 aa6.9□□□□□ -1.3
SF3B3-205ENST00000564899 COX6CP09669 75 aa6.9□□□□□ -1.3
SF3B3-205ENST00000564899 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
SF3B3-205ENST00000564899 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
SF3B3-205ENST00000564899 SCGB1C2P0DMR2 95 aa6.89□□□□□ -1.31
SF3B3-205ENST00000564899 LYRM7Q5U5X0 104 aa6.89□□□□□ -1.31
SF3B3-205ENST00000564899 ETDCA0A1B0GVM5 59 aa6.88□□□□□ -1.31
SF3B3-205ENST00000564899 J3QL48 77 aa6.88□□□□□ -1.31
SF3B3-205ENST00000564899 FABP2P12104 132 aa6.88□□□□□ -1.31
SF3B3-205ENST00000564899 SPRR1AP35321 89 aa6.88□□□□□ -1.31
SF3B3-205ENST00000564899 VAMP3Q15836 100 aa6.88□□□□□ -1.31
SF3B3-205ENST00000564899 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
SF3B3-205ENST00000564899 COX7BP24311 80 aa6.87□□□□□ -1.31
SF3B3-205ENST00000564899 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-205ENST00000564899 H0YGX0 51 aa6.86□□□□□ -1.31
SF3B3-205ENST00000564899 ELOF1P60002 83 aaKnown RBP6.86□□□□□ -1.31
SF3B3-205ENST00000564899 CLEC2BQ92478 149 aa6.86□□□□□ -1.31
SF3B3-205ENST00000564899 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
SF3B3-205ENST00000564899 B5MCH6 92 aa6.85□□□□□ -1.31
SF3B3-205ENST00000564899 BCE1O60756 84 aa6.85□□□□□ -1.31
SF3B3-205ENST00000564899 FAM19A1Q7Z5A9 133 aa6.85□□□□□ -1.31
SF3B3-205ENST00000564899 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
SF3B3-205ENST00000564899 SPCS1Q9Y6A9 102 aa6.85□□□□□ -1.31
SF3B3-205ENST00000564899 C1orf137Q5JT78 98 aa6.84□□□□□ -1.31
SF3B3-205ENST00000564899 Q6ZRX8 168 aa6.84□□□□□ -1.31
SF3B3-205ENST00000564899 LRP2P98164 4655 aa6.84□□□□□ -1.31
SF3B3-205ENST00000564899 A0A1B0GV90 55 aa6.83□□□□□ -1.32
SF3B3-205ENST00000564899 TCL1BO95988 128 aa6.83□□□□□ -1.32
SF3B3-205ENST00000564899 UBE2AP49459 152 aa6.83□□□□□ -1.32
SF3B3-205ENST00000564899 PRLHP81277 87 aa6.83□□□□□ -1.32
SF3B3-205ENST00000564899 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
SF3B3-205ENST00000564899 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
SF3B3-205ENST00000564899 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
SF3B3-205ENST00000564899 LST1O00453 97 aa6.82□□□□□ -1.32
SF3B3-205ENST00000564899 SLC25A20O43772 301 aa6.82□□□□□ -1.32
SF3B3-205ENST00000564899 ATXN8Q156A1 80 aa6.82□□□□□ -1.32
SF3B3-205ENST00000564899 LINC00575Q6W349 94 aa6.82□□□□□ -1.32
SF3B3-205ENST00000564899 KRTAP29-1A8MX34 341 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-205ENST00000564899 K7EP34 96 aa6.81□□□□□ -1.32
SF3B3-205ENST00000564899 DHRS4-AS1Q9P1J3 65 aa6.81□□□□□ -1.32
SF3B3-205ENST00000564899 A0A1B0GX51 115 aa6.8□□□□□ -1.32
SF3B3-205ENST00000564899 hADV29S1A0JD25 119 aa6.8□□□□□ -1.32
SF3B3-205ENST00000564899 H0Y9J4 135 aa6.8□□□□□ -1.32
SF3B3-205ENST00000564899 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
SF3B3-205ENST00000564899 SNCGO76070 127 aa6.8□□□□□ -1.32
SF3B3-205ENST00000564899 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
SF3B3-205ENST00000564899 Q9BRP9 147 aa6.8□□□□□ -1.32
SF3B3-205ENST00000564899 DNAL4O96015 105 aa6.79□□□□□ -1.32
SF3B3-205ENST00000564899 TRACP01848 142 aa6.79□□□□□ -1.32
SF3B3-205ENST00000564899 RPL37AP61513 92 aaKnown RBP6.79□□□□□ -1.32
SF3B3-205ENST00000564899 KRTAP13-1Q8IUC0 172 aa6.79□□□□□ -1.32
SF3B3-205ENST00000564899 SMCR5Q8TEV8 140 aa6.79□□□□□ -1.32
SF3B3-205ENST00000564899 HIGD2AQ9BW72 106 aa6.79□□□□□ -1.32
SF3B3-205ENST00000564899 H3BMG7 143 aa6.78□□□□□ -1.32
SF3B3-205ENST00000564899 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
SF3B3-205ENST00000564899 ZNF861PO60384 105 aa6.77□□□□□ -1.33
SF3B3-205ENST00000564899 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
SF3B3-205ENST00000564899 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.76□□□□□ -1.33
SF3B3-205ENST00000564899 Q6ZQY7 126 aa6.76□□□□□ -1.33
SF3B3-205ENST00000564899 TNXBP22105 4242 aa6.76□□□□□ -1.33
SF3B3-205ENST00000564899 C9JAW5 83 aa6.75□□□□□ -1.33
SF3B3-205ENST00000564899 KRTAP10-4P60372 401 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-205ENST00000564899 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
SF3B3-205ENST00000564899 ST20-AS1Q8NBB2 130 aa6.74□□□□□ -1.33
SF3B3-205ENST00000564899 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
SF3B3-205ENST00000564899 UBE2V1Q13404 147 aa6.73□□□□□ -1.33
SF3B3-205ENST00000564899 OCIAD2Q56VL3 154 aa6.72□□□□□ -1.33
SF3B3-205ENST00000564899 GHRHP01286 108 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 703.5 ms