RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 HIGD2AQ9BW72 106 aa9.64□□□□□ -0.87
RAB40C-208ENST00000564703 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
RAB40C-208ENST00000564703 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
RAB40C-208ENST00000564703 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
RAB40C-208ENST00000564703 A6NDN8 102 aa9.62□□□□□ -0.87
RAB40C-208ENST00000564703 PYY3Q5JQD4 70 aa9.62□□□□□ -0.87
RAB40C-208ENST00000564703 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
RAB40C-208ENST00000564703 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
RAB40C-208ENST00000564703 TRAV13-2A0A0B4J235 113 aa9.59□□□□□ -0.87
RAB40C-208ENST00000564703 MT1HL1P0DM35 61 aa9.59□□□□□ -0.87
RAB40C-208ENST00000564703 B5MCH6 92 aa9.58□□□□□ -0.88
RAB40C-208ENST00000564703 KRTAP4-16G5E9R7 235 aaPredicted RBP9.58□□□□□ -0.88
RAB40C-208ENST00000564703 KRTAP1-4P0C5Y4 121 aa9.58□□□□□ -0.88
RAB40C-208ENST00000564703 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
RAB40C-208ENST00000564703 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
RAB40C-208ENST00000564703 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
RAB40C-208ENST00000564703 SMCR5Q8TEV8 140 aa9.58□□□□□ -0.88
RAB40C-208ENST00000564703 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
RAB40C-208ENST00000564703 ZNF706Q9Y5V0 76 aaPredicted RBP9.57□□□□□ -0.88
RAB40C-208ENST00000564703 MYCBP2O75592 4640 aa9.57□□□□□ -0.88
RAB40C-208ENST00000564703 A4D1N5 150 aa9.56□□□□□ -0.88
RAB40C-208ENST00000564703 CRYGAP11844 174 aa9.56□□□□□ -0.88
RAB40C-208ENST00000564703 Q6ZRX8 168 aa9.56□□□□□ -0.88
RAB40C-208ENST00000564703 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
RAB40C-208ENST00000564703 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
RAB40C-208ENST00000564703 ANAPC11Q9NYG5 84 aa9.53□□□□□ -0.88
RAB40C-208ENST00000564703 FAM229BQ4G0N7 80 aa9.52□□□□□ -0.89
RAB40C-208ENST00000564703 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
RAB40C-208ENST00000564703 COX7BP24311 80 aa9.51□□□□□ -0.89
RAB40C-208ENST00000564703 TAL2Q16559 108 aa9.51□□□□□ -0.89
RAB40C-208ENST00000564703 SPRR4Q96PI1 79 aa9.51□□□□□ -0.89
RAB40C-208ENST00000564703 VAMP3Q15836 100 aa9.5□□□□□ -0.89
RAB40C-208ENST00000564703 TYMSOSQ8TAI1 123 aa9.5□□□□□ -0.89
RAB40C-208ENST00000564703 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
RAB40C-208ENST00000564703 TRBV7-6A0A0J9YX20 115 aa9.49□□□□□ -0.89
RAB40C-208ENST00000564703 C2orf91Q6ZV80 131 aa9.49□□□□□ -0.89
RAB40C-208ENST00000564703 Q9BRP9 147 aa9.49□□□□□ -0.89
RAB40C-208ENST00000564703 SMIM6P0DI80 62 aa9.48□□□□□ -0.89
RAB40C-208ENST00000564703 GAGE2AQ6NT46 116 aa9.48□□□□□ -0.89
RAB40C-208ENST00000564703 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
RAB40C-208ENST00000564703 RAB37Q96AX2 223 aa9.48□□□□□ -0.89
RAB40C-208ENST00000564703 C12orf57Q99622 126 aa9.48□□□□□ -0.89
RAB40C-208ENST00000564703 UQCR10Q9UDW1 63 aa9.48□□□□□ -0.89
RAB40C-208ENST00000564703 A0A087X002 238 aa9.47□□□□□ -0.89
RAB40C-208ENST00000564703 TMEM238LA0A1B0GVL6 79 aa9.47□□□□□ -0.89
RAB40C-208ENST00000564703 A0A1B0GWB2 263 aa9.47□□□□□ -0.89
RAB40C-208ENST00000564703 A6NJY4 79 aa9.47□□□□□ -0.89
RAB40C-208ENST00000564703 ERC2-IT1O76042 136 aa9.47□□□□□ -0.89
RAB40C-208ENST00000564703 ELOF1P60002 83 aaKnown RBP9.47□□□□□ -0.89
RAB40C-208ENST00000564703 CEND1Q8N111 149 aa9.47□□□□□ -0.89
RAB40C-208ENST00000564703 FAT3Q8TDW7 4589 aa9.46□□□□□ -0.9
RAB40C-208ENST00000564703 CFC1BP0CG36 223 aa9.44□□□□□ -0.9
RAB40C-208ENST00000564703 CFC1P0CG37 223 aa9.44□□□□□ -0.9
RAB40C-208ENST00000564703 SLC25A20O43772 301 aa9.43□□□□□ -0.9
RAB40C-208ENST00000564703 NHP2Q9NX24 153 aaKnown RBP9.43□□□□□ -0.9
RAB40C-208ENST00000564703 HSD52Q0P140 79 aa9.42□□□□□ -0.9
RAB40C-208ENST00000564703 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
RAB40C-208ENST00000564703 A0A0B4J2C4 111 aa9.41□□□□□ -0.9
RAB40C-208ENST00000564703 H7C2G1 150 aa9.41□□□□□ -0.9
RAB40C-208ENST00000564703 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
RAB40C-208ENST00000564703 BVES-AS1Q5T3Y7 98 aa9.4□□□□□ -0.9
RAB40C-208ENST00000564703 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.9
RAB40C-208ENST00000564703 C3orf22Q8N5N4 141 aa9.39□□□□□ -0.91
RAB40C-208ENST00000564703 PRO1854Q9UHT4 67 aa9.39□□□□□ -0.91
RAB40C-208ENST00000564703 Q1RN00 199 aa9.38□□□□□ -0.91
RAB40C-208ENST00000564703 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
RAB40C-208ENST00000564703 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
RAB40C-208ENST00000564703 PRO1933Q9H354 126 aa9.38□□□□□ -0.91
RAB40C-208ENST00000564703 IGLV9-49A0A0B4J1Y8 123 aa9.37□□□□□ -0.91
RAB40C-208ENST00000564703 SNCGO76070 127 aa9.37□□□□□ -0.91
RAB40C-208ENST00000564703 FXYD2P54710 66 aa9.37□□□□□ -0.91
RAB40C-208ENST00000564703 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
RAB40C-208ENST00000564703 TSPAN13O95857 204 aa9.36□□□□□ -0.91
RAB40C-208ENST00000564703 TEX49A0A1B0GTD5 131 aa9.35□□□□□ -0.91
RAB40C-208ENST00000564703 hADV29S1A0JD25 119 aa9.35□□□□□ -0.91
RAB40C-208ENST00000564703 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
RAB40C-208ENST00000564703 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
RAB40C-208ENST00000564703 LAMTOR3Q9UHA4 124 aa9.35□□□□□ -0.91
RAB40C-208ENST00000564703 HERC1Q15751 4861 aa9.35□□□□□ -0.91
RAB40C-208ENST00000564703 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
RAB40C-208ENST00000564703 H0YGX0 51 aa9.33□□□□□ -0.92
RAB40C-208ENST00000564703 SPRR1BP22528 89 aa9.33□□□□□ -0.92
RAB40C-208ENST00000564703 MOBPQ13875 183 aa9.33□□□□□ -0.92
RAB40C-208ENST00000564703 C9orf153Q5TBE3 101 aa9.33□□□□□ -0.92
RAB40C-208ENST00000564703 CTAG1AP78358 180 aa9.31□□□□□ -0.92
RAB40C-208ENST00000564703 Q8NBF4 154 aa9.31□□□□□ -0.92
RAB40C-208ENST00000564703 TSTD3H0UI37 97 aa9.3□□□□□ -0.92
RAB40C-208ENST00000564703 PSMB2P49721 201 aa9.29□□□□□ -0.92
RAB40C-208ENST00000564703 TNXBP22105 4242 aa9.29□□□□□ -0.92
RAB40C-208ENST00000564703 IGLV5-48A0A075B6I7 105 aa9.28□□□□□ -0.92
RAB40C-208ENST00000564703 M0R143 59 aa9.28□□□□□ -0.92
RAB40C-208ENST00000564703 COX6CP09669 75 aa9.28□□□□□ -0.92
RAB40C-208ENST00000564703 Q6ZQY7 126 aa9.28□□□□□ -0.92
RAB40C-208ENST00000564703 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.27□□□□□ -0.93
RAB40C-208ENST00000564703 K7ERJ3 54 aa9.26□□□□□ -0.93
RAB40C-208ENST00000564703 SPINK1P00995 79 aa9.26□□□□□ -0.93
RAB40C-208ENST00000564703 PRR4Q16378 134 aa9.25□□□□□ -0.93
RAB40C-208ENST00000564703 Q8N377 158 aa9.25□□□□□ -0.93
RAB40C-208ENST00000564703 F8WEM9 126 aa9.24□□□□□ -0.93
RAB40C-208ENST00000564703 LINC01547P58512 204 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms