RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CFAP46Q8IYW2 2715 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 SETD2Q9BYW2 2564 aaPredicted RBP1.98□□□□□ -2.09
LINC00560-201ENST00000564593 TRGV2A0A075B6R0 118 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 A0A096LNT2 108 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 TRGV1A0A0A0MS02 117 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 TRBV10-2A0A0K0K1G8 114 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 A0A1B0GW54 56 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 TRBV6-4A0A1B0GX49 114 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 C9JAW5 83 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 DNAL4O96015 105 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 IGHV3-33P01772 117 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 CRPP02741 224 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 SPINK8P0C7L1 97 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 PRB4P10163 310 aaPredicted RBP1.98□□□□□ -2.09
LINC00560-201ENST00000564593 INSL3P51460 131 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 EMP1P54849 157 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 WFDC2Q14508 124 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 DEFB114Q30KQ6 69 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 MEIG1Q5JSS6 88 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 SBSPONQ8IVN8 264 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 PSORS1C2Q9UIG4 136 aa1.98□□□□□ -2.09
LINC00560-201ENST00000564593 TEX15Q9BXT5 2789 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 CENPEQ02224 2701 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 UBR5O95071 2799 aaPredicted RBP1.97□□□□□ -2.09
LINC00560-201ENST00000564593 NDUFC2O95298 119 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 TCL1BO95988 128 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 TRACP01848 142 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 DEFB1P60022 68 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 Q6Q795 121 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 C2orf82Q6UX34 121 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 Q6ZUT4 128 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 MUSTN1Q8IVN3 82 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 C11orf68Q9H3H3 251 aaKnown RBP1.97□□□□□ -2.09
LINC00560-201ENST00000564593 ZFYVE26Q68DK2 2539 aa1.97□□□□□ -2.09
LINC00560-201ENST00000564593 FLNAP21333 2647 aaKnown RBP1.96□□□□□ -2.1
LINC00560-201ENST00000564593 IGHV3-64A0A075B6Q5 118 aa1.96□□□□□ -2.1
LINC00560-201ENST00000564593 H0YGX0 51 aa1.96□□□□□ -2.1
LINC00560-201ENST00000564593 H7C2G1 150 aa1.96□□□□□ -2.1
LINC00560-201ENST00000564593 CKS1BP61024 79 aa1.96□□□□□ -2.1
LINC00560-201ENST00000564593 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.1
LINC00560-201ENST00000564593 IMUPQ9GZP8 106 aa1.96□□□□□ -2.1
LINC00560-201ENST00000564593 UTP20O75691 2785 aaKnown RBP1.95□□□□□ -2.1
LINC00560-201ENST00000564593 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.95□□□□□ -2.1
LINC00560-201ENST00000564593 IGKV2-29A2NJV5 120 aaPredicted RBP1.95□□□□□ -2.1
LINC00560-201ENST00000564593 IBA57-AS1B1ANH7 110 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 SS18Q15532 418 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 DEFB136Q30KP8 78 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 DAND5Q8N907 189 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 LINC00308Q8TCZ7 52 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 CDKN2A-AS1Q9UH64 79 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 ASPMQ8IZT6 3477 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 POLQO75417 2590 aa1.95□□□□□ -2.1
LINC00560-201ENST00000564593 MAP1AP78559 2803 aaPredicted RBP1.95□□□□□ -2.1
LINC00560-201ENST00000564593 SPENQ96T58 3664 aaKnown RBP1.94□□□□□ -2.1
LINC00560-201ENST00000564593 CCDC168Q8NDH2 2452 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 TRBV6-8A0A0A6YYG3 113 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 TRAV13-1A0A0B4J241 112 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 A0A1B0GX51 115 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 H3BPC8 53 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 IGLV1-51P01701 117 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
LINC00560-201ENST00000564593 COX17Q14061 63 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 ATP5EP2Q5VTU8 51 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 C10orf99Q6UWK7 81 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 COX7B2Q8TF08 81 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 SONP18583 2426 aaKnown RBP1.94□□□□□ -2.1
LINC00560-201ENST00000564593 BSNQ9UPA5 3926 aa1.94□□□□□ -2.1
LINC00560-201ENST00000564593 RPL28P46779 137 aaKnown RBP1.93□□□□□ -2.1
LINC00560-201ENST00000564593 LINC00158P58513 81 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 DEFB121Q5J5C9 76 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 Q6ZTI0 123 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 LINC00643Q86TS7 51 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 Q8IZM0 81 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 C15orf53Q8NAA6 179 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 ZNF625Q96I27 306 aaPredicted RBP1.93□□□□□ -2.1
LINC00560-201ENST00000564593 NOP10Q9NPE3 64 aaKnown RBP1.93□□□□□ -2.1
LINC00560-201ENST00000564593 PRO0255Q9UI72 69 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 JMJD1CQ15652 2540 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 MXRA5Q9NR99 2828 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 TRBV7-7A0A0K0K1E9 115 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 JMJD7-PLA2G4BH0Y9G9 81 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 J3QKU1 62 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 Q8NDZ9 215 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 COL12A1Q99715 3063 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 ORMDL1Q9P0S3 153 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 TOMM7Q9P0U1 55 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 ZANQ9Y493 2812 aa1.93□□□□□ -2.1
LINC00560-201ENST00000564593 MTORP42345 2549 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 LAMA5O15230 3695 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 TENM4Q6N022 2769 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 TEX49A0A1B0GTD5 131 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 ATOX1O00244 68 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 MT-ATP8P03928 68 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 LINC00694P0DN24 101 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 MIFP14174 115 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 PDE6GP18545 87 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 NPC2P61916 151 aa1.92□□□□□ -2.1
LINC00560-201ENST00000564593 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms