RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SCXQ7RTU7 201 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 C3orf22Q8N5N4 141 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 AMELXQ99217 191 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 CYSLTR1Q9Y271 337 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
LINC00254-201ENST00000563416 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.68□□□□□ -1.98
LINC00254-201ENST00000563416 TRAV13-1A0A0B4J241 112 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 LINC01549A6NIU2 74 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 IGIPA6NJ69 53 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 COX7A2LO14548 114 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 G0S2P27469 103 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 UBE2D1P51668 147 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 HAMPP81172 84 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 Q5VSD8 79 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 SLC25A34Q6PIV7 304 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 C18orf32Q8TCD1 76 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 TOMM6Q96B49 74 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 TMEM141Q96I45 108 aa2.68□□□□□ -1.98
LINC00254-201ENST00000563416 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
LINC00254-201ENST00000563416 IGHV3-64A0A075B6Q5 118 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 APOMO95445 188 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
LINC00254-201ENST00000563416 FABP9Q0Z7S8 132 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 OR10D4PQ8NGN7 298 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 SPACA4Q8TDM5 124 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 C2orf88Q9BSF0 95 aa2.67□□□□□ -1.98
LINC00254-201ENST00000563416 A8MWP4 228 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 TMEM238C9JI98 176 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SMR3BP02814 79 aaPredicted RBP2.66□□□□□ -1.98
LINC00254-201ENST00000563416 COX6A2Q02221 97 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SPAG11BQ08648 103 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 C5orf38Q86SI9 138 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 LINC00526Q96FQ7 95 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 CARD19Q96LW7 228 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SIGMAR1Q99720 223 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 SMCO4Q9NRQ5 59 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 PKIGQ9Y2B9 76 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 TNXBP22105 4242 aa2.66□□□□□ -1.98
LINC00254-201ENST00000563416 HERC1Q15751 4861 aa2.65□□□□□ -1.98
LINC00254-201ENST00000563416 A0A096LNI7 61 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 A6NED7 52 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 A8MUU9 505 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 HBDP02042 147 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 SEC11AP67812 179 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 SCGB3A1Q96QR1 104 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 MRPL35Q9NZE8 188 aaKnown RBP2.65□□□□□ -1.99
LINC00254-201ENST00000563416 PLAC8Q9NZF1 115 aa2.65□□□□□ -1.99
LINC00254-201ENST00000563416 DMBT1Q9UGM3 2413 aaPredicted RBP2.64□□□□□ -1.99
LINC00254-201ENST00000563416 LOC107984640A0A0U1RRK4 108 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 COLCA2A8K830 154 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 NDUFA1O15239 70 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 IGLC3P0DOY3 106 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 MOBPQ13875 183 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 Q8IZM0 81 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 CHCHD1Q96BP2 118 aaKnown RBP2.64□□□□□ -1.99
LINC00254-201ENST00000563416 CST9LQ9H4G1 147 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 LINC00474Q9P2X8 69 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
LINC00254-201ENST00000563416 IGKV2-24A0A0C4DH68 120 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 TRBV30A0A0K0K1B3 111 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 A0A1B0GW54 56 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 H3BQ85 93 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 SLC25A20O43772 301 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 TRGC2P03986 189 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 INAFM2P0DMQ5 153 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 UNQ6190/PRO20217Q6UXQ8 127 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 C6orf48Q9UBA6 75 aa2.63□□□□□ -1.99
LINC00254-201ENST00000563416 ZNF22P17026 224 aaPredicted RBP2.62□□□□□ -1.99
LINC00254-201ENST00000563416 RPL37AP61513 92 aaKnown RBP2.62□□□□□ -1.99
LINC00254-201ENST00000563416 PMCHL1Q16048 86 aa2.62□□□□□ -1.99
LINC00254-201ENST00000563416 C2orf82Q6UX34 121 aa2.62□□□□□ -1.99
LINC00254-201ENST00000563416 ADM2Q7Z4H4 148 aa2.62□□□□□ -1.99
LINC00254-201ENST00000563416 TRAV12-1A0A0B4J245 112 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 A0A0B4J2C4 111 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 C11orf86A6NJI1 115 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 F8VRH5 84 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 H3BRM9 83 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 C9orf116Q5BN46 136 aaPredicted RBP2.61□□□□□ -1.99
LINC00254-201ENST00000563416 IFI27L1Q96BM0 104 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 TOMM7Q9P0U1 55 aa2.61□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BKO60814 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BJP06899 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 SPINK8P0C7L1 97 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BOP23527 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BBP33778 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BDP58876 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 CKS1BP61024 79 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BCP62807 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST2H2BEQ16778 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.6□□□□□ -1.99
LINC00254-201ENST00000563416 BAGE3Q86Y29 109 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 FAM19A2Q8N3H0 131 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 COX7B2Q8TF08 81 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BHQ93079 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 DPH3Q96FX2 82 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms