RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
CDH1-205ENST00000562836 SPINT4Q6UDR6 99 aa5.85□□□□□ -1.47
CDH1-205ENST00000562836 CIRBP-AS1Q8TBR5 109 aa5.85□□□□□ -1.47
CDH1-205ENST00000562836 KRTAP26-1Q6PEX3 210 aa5.84□□□□□ -1.47
CDH1-205ENST00000562836 A0A1B0GU69 56 aa5.83□□□□□ -1.48
CDH1-205ENST00000562836 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
CDH1-205ENST00000562836 PCNX1Q96RV3 2341 aa5.83□□□□□ -1.48
CDH1-205ENST00000562836 CSMD1Q96PZ7 3565 aa5.83□□□□□ -1.48
CDH1-205ENST00000562836 UQCR11O14957 56 aa5.83□□□□□ -1.48
CDH1-205ENST00000562836 IGF2RP11717 2491 aa5.82□□□□□ -1.48
CDH1-205ENST00000562836 HTN1P15515 57 aa5.82□□□□□ -1.48
CDH1-205ENST00000562836 SPTBN4Q9H254 2564 aa5.82□□□□□ -1.48
CDH1-205ENST00000562836 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
CDH1-205ENST00000562836 CAMK2N2Q96S95 79 aa5.82□□□□□ -1.48
CDH1-205ENST00000562836 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
CDH1-205ENST00000562836 IGLV5-37A0A075B6J1 123 aa5.81□□□□□ -1.48
CDH1-205ENST00000562836 CSNK1G2-AS1Q8NCQ2 148 aa5.81□□□□□ -1.48
CDH1-205ENST00000562836 COL6A6A6NMZ7 2263 aa5.8□□□□□ -1.48
CDH1-205ENST00000562836 G3V318 75 aa5.8□□□□□ -1.48
CDH1-205ENST00000562836 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
CDH1-205ENST00000562836 Q8IZM0 81 aa5.8□□□□□ -1.48
CDH1-205ENST00000562836 C1orf137Q5JT78 98 aa5.8□□□□□ -1.48
CDH1-205ENST00000562836 INSP01308 110 aa5.79□□□□□ -1.48
CDH1-205ENST00000562836 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.79□□□□□ -1.48
CDH1-205ENST00000562836 NBASA2RRP1 2371 aa5.79□□□□□ -1.48
CDH1-205ENST00000562836 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
CDH1-205ENST00000562836 TLN1Q9Y490 2541 aaKnown RBP5.78□□□□□ -1.48
CDH1-205ENST00000562836 COL12A1Q99715 3063 aa5.78□□□□□ -1.48
CDH1-205ENST00000562836 NUPR2A6NF83 97 aa5.78□□□□□ -1.48
CDH1-205ENST00000562836 C5orf56Q8N8D9 126 aa5.78□□□□□ -1.48
CDH1-205ENST00000562836 SPTA1P02549 2419 aa5.77□□□□□ -1.49
CDH1-205ENST00000562836 A0A087WSZ3 146 aa5.77□□□□□ -1.49
CDH1-205ENST00000562836 ATRXP46100 2492 aa5.77□□□□□ -1.49
CDH1-205ENST00000562836 CHD8Q9HCK8 2581 aa5.77□□□□□ -1.49
CDH1-205ENST00000562836 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
CDH1-205ENST00000562836 LRBAP50851 2863 aa5.75□□□□□ -1.49
CDH1-205ENST00000562836 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
CDH1-205ENST00000562836 ANKHD1Q8IWZ3 2542 aaKnown RBP5.75□□□□□ -1.49
CDH1-205ENST00000562836 NCOR2Q9Y618 2525 aa5.75□□□□□ -1.49
CDH1-205ENST00000562836 DEFB105AQ8NG35 78 aa5.75□□□□□ -1.49
CDH1-205ENST00000562836 USMG5Q96IX5 58 aa5.75□□□□□ -1.49
CDH1-205ENST00000562836 A0A087WTM6 91 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 TRGV1A0A0A0MS02 117 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 A6NDX4 124 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 H3BUA1 57 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 SPINK13Q1W4C9 94 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 C7orf33Q8WU49 177 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 Q5W150 140 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 SVEP1Q4LDE5 3571 aa5.74□□□□□ -1.49
CDH1-205ENST00000562836 KRTAP29-1A8MX34 341 aaPredicted RBP5.73□□□□□ -1.49
CDH1-205ENST00000562836 RHPN1-AS1Q9BWJ2 59 aa5.73□□□□□ -1.49
CDH1-205ENST00000562836 TACC2O95359 2948 aa5.73□□□□□ -1.49
CDH1-205ENST00000562836 CACNA1BQ00975 2339 aa5.73□□□□□ -1.49
CDH1-205ENST00000562836 WNK1Q9H4A3 2382 aa5.72□□□□□ -1.49
CDH1-205ENST00000562836 DCHS2Q6V1P9 2916 aa5.72□□□□□ -1.49
CDH1-205ENST00000562836 OTOGQ6ZRI0 2925 aa5.71□□□□□ -1.49
CDH1-205ENST00000562836 RPL37AP61513 92 aaKnown RBP5.7□□□□□ -1.5
CDH1-205ENST00000562836 ASH1LQ9NR48 2969 aaKnown RBP5.7□□□□□ -1.5
CDH1-205ENST00000562836 SSBP3-AS1Q7Z2R9 100 aa5.7□□□□□ -1.5
CDH1-205ENST00000562836 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
CDH1-205ENST00000562836 FLG2Q5D862 2391 aaPredicted RBP5.7□□□□□ -1.5
CDH1-205ENST00000562836 IGLV5-48A0A075B6I7 105 aa5.69□□□□□ -1.5
CDH1-205ENST00000562836 COX17Q14061 63 aa5.69□□□□□ -1.5
CDH1-205ENST00000562836 Q8NBF4 154 aa5.69□□□□□ -1.5
CDH1-205ENST00000562836 DEFB131BA0A096LNP1 70 aa5.67□□□□□ -1.5
CDH1-205ENST00000562836 AKAP6Q13023 2319 aa5.67□□□□□ -1.5
CDH1-205ENST00000562836 ITPR1Q14643 2758 aa5.67□□□□□ -1.5
CDH1-205ENST00000562836 IGLV8-61A0A075B6I0 122 aa5.66□□□□□ -1.5
CDH1-205ENST00000562836 A0A1B0GVX0 72 aa5.66□□□□□ -1.5
CDH1-205ENST00000562836 Q8N377 158 aa5.66□□□□□ -1.5
CDH1-205ENST00000562836 VPS13CQ709C8 3753 aa5.65□□□□□ -1.5
CDH1-205ENST00000562836 Q96NJ1 140 aa5.64□□□□□ -1.51
CDH1-205ENST00000562836 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
CDH1-205ENST00000562836 HRNRQ86YZ3 2850 aaPredicted RBP5.64□□□□□ -1.51
CDH1-205ENST00000562836 PIEZO1Q92508 2521 aa5.64□□□□□ -1.51
CDH1-205ENST00000562836 IGKV2-24A0A0C4DH68 120 aa5.63□□□□□ -1.51
CDH1-205ENST00000562836 BRD3OSQ6XYD6 125 aa5.63□□□□□ -1.51
CDH1-205ENST00000562836 CHD6Q8TD26 2715 aa5.63□□□□□ -1.51
CDH1-205ENST00000562836 LY6EQ16553 131 aa5.62□□□□□ -1.51
CDH1-205ENST00000562836 C2CD3Q4AC94 2353 aa5.62□□□□□ -1.51
CDH1-205ENST00000562836 SPTAN1Q13813 2472 aaKnown RBP5.62□□□□□ -1.51
CDH1-205ENST00000562836 H3BUX3 64 aa5.62□□□□□ -1.51
CDH1-205ENST00000562836 CCL19Q99731 98 aa5.61□□□□□ -1.51
CDH1-205ENST00000562836 HIVEP3Q5T1R4 2406 aa5.61□□□□□ -1.51
CDH1-205ENST00000562836 MAP1AP78559 2803 aaPredicted RBP5.6□□□□□ -1.51
CDH1-205ENST00000562836 PKD1L2Q7Z442 2459 aa5.6□□□□□ -1.51
CDH1-205ENST00000562836 CSMD2Q7Z408 3487 aa5.6□□□□□ -1.51
CDH1-205ENST00000562836 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
CDH1-205ENST00000562836 IGLV7-43P04211 117 aa5.59□□□□□ -1.52
CDH1-205ENST00000562836 ACYP2P14621 99 aa5.59□□□□□ -1.52
CDH1-205ENST00000562836 CELSR1Q9NYQ6 3014 aa5.59□□□□□ -1.52
CDH1-205ENST00000562836 CLPSL2Q6UWE3 100 aa5.58□□□□□ -1.52
CDH1-205ENST00000562836 C6orf48Q9UBA6 75 aa5.58□□□□□ -1.52
CDH1-205ENST00000562836 CRYBG3Q68DQ2 2970 aa5.58□□□□□ -1.52
CDH1-205ENST00000562836 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
CDH1-205ENST00000562836 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
CDH1-205ENST00000562836 FAM168BA1KXE4 195 aa5.58□□□□□ -1.52
CDH1-205ENST00000562836 PANO1I0J062 215 aa5.58□□□□□ -1.52
CDH1-205ENST00000562836 NBDYA0A0U1RRE5 68 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms