RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 C9JAW5 83 aa10.43□□□□□ -0.74
RPL28-211ENST00000560881 SNCGO76070 127 aa10.43□□□□□ -0.74
RPL28-211ENST00000560881 RPL37AP61513 92 aaKnown RBP10.43□□□□□ -0.74
RPL28-211ENST00000560881 A4D1N5 150 aa10.42□□□□□ -0.74
RPL28-211ENST00000560881 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
RPL28-211ENST00000560881 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
RPL28-211ENST00000560881 NDUFV3P56181 108 aaKnown RBP10.41□□□□□ -0.74
RPL28-211ENST00000560881 SERTAD4-AS1Q5TG53 156 aa10.41□□□□□ -0.74
RPL28-211ENST00000560881 TRBV10-2A0A0K0K1G8 114 aa10.4□□□□□ -0.74
RPL28-211ENST00000560881 C7orf33Q8WU49 177 aa10.4□□□□□ -0.74
RPL28-211ENST00000560881 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
RPL28-211ENST00000560881 A0A0U1RRA0 63 aa10.38□□□□□ -0.75
RPL28-211ENST00000560881 NDUFA12Q9UI09 145 aa10.38□□□□□ -0.75
RPL28-211ENST00000560881 IFITM1P13164 125 aa10.38□□□□□ -0.75
RPL28-211ENST00000560881 MUSTN1Q8IVN3 82 aa10.38□□□□□ -0.75
RPL28-211ENST00000560881 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
RPL28-211ENST00000560881 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
RPL28-211ENST00000560881 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
RPL28-211ENST00000560881 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
RPL28-211ENST00000560881 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
RPL28-211ENST00000560881 PKHD1L1Q86WI1 4243 aa10.36□□□□□ -0.75
RPL28-211ENST00000560881 H3BT86 120 aa10.36□□□□□ -0.75
RPL28-211ENST00000560881 Q1RN00 199 aa10.35□□□□□ -0.75
RPL28-211ENST00000560881 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
RPL28-211ENST00000560881 FAM240AA0A1B0GVK7 77 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 B5MCH6 92 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 LINC00158P58513 81 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
RPL28-211ENST00000560881 COX17Q14061 63 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 MEIG1Q5JSS6 88 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 SPANXDQ9BXN6 97 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 SPANXCQ9NY87 97 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
RPL28-211ENST00000560881 HERV-K104P63124 156 aa10.33□□□□□ -0.76
RPL28-211ENST00000560881 C22orf24Q9Y442 160 aa10.33□□□□□ -0.76
RPL28-211ENST00000560881 TRIAP1O43715 76 aa10.32□□□□□ -0.76
RPL28-211ENST00000560881 COX6CP09669 75 aa10.31□□□□□ -0.76
RPL28-211ENST00000560881 Q8NDZ9 215 aa10.31□□□□□ -0.76
RPL28-211ENST00000560881 PSORS1C2Q9UIG4 136 aa10.31□□□□□ -0.76
RPL28-211ENST00000560881 H7C2G1 150 aa10.31□□□□□ -0.76
RPL28-211ENST00000560881 LITAFQ99732 161 aa10.31□□□□□ -0.76
RPL28-211ENST00000560881 UBE2BP63146 152 aa10.3□□□□□ -0.76
RPL28-211ENST00000560881 MIR7-3HGQ8N6C7 128 aa10.3□□□□□ -0.76
RPL28-211ENST00000560881 DAND5Q8N907 189 aa10.3□□□□□ -0.76
RPL28-211ENST00000560881 TIMM17BO60830 172 aa10.29□□□□□ -0.76
RPL28-211ENST00000560881 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
RPL28-211ENST00000560881 TEX49A0A1B0GTD5 131 aa10.28□□□□□ -0.76
RPL28-211ENST00000560881 CCDC179H3BU77 68 aa10.28□□□□□ -0.76
RPL28-211ENST00000560881 MRPL55Q7Z7F7 128 aaKnown RBP10.28□□□□□ -0.76
RPL28-211ENST00000560881 PLA2G2DQ9UNK4 145 aa10.28□□□□□ -0.76
RPL28-211ENST00000560881 TRBV7-7A0A0K0K1E9 115 aa10.27□□□□□ -0.77
RPL28-211ENST00000560881 LST1O00453 97 aa10.27□□□□□ -0.77
RPL28-211ENST00000560881 VPREB1P12018 145 aa10.27□□□□□ -0.77
RPL28-211ENST00000560881 RPL37AP8A6NKH3 93 aa10.26□□□□□ -0.77
RPL28-211ENST00000560881 C1orf137Q5JT78 98 aa10.26□□□□□ -0.77
RPL28-211ENST00000560881 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
RPL28-211ENST00000560881 NKAPP1Q8N9T2 125 aa10.25□□□□□ -0.77
RPL28-211ENST00000560881 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
RPL28-211ENST00000560881 FAT3Q8TDW7 4589 aa10.25□□□□□ -0.77
RPL28-211ENST00000560881 ACYP1P07311 99 aa10.25□□□□□ -0.77
RPL28-211ENST00000560881 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
RPL28-211ENST00000560881 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
RPL28-211ENST00000560881 NPC2P61916 151 aa10.22□□□□□ -0.77
RPL28-211ENST00000560881 ADAMTSL4-AS1Q5T5F5 129 aa10.22□□□□□ -0.77
RPL28-211ENST00000560881 IGKV2-28A0A075B6P5 120 aa10.22□□□□□ -0.77
RPL28-211ENST00000560881 IGKV2D-28P01615 120 aa10.22□□□□□ -0.77
RPL28-211ENST00000560881 NCR3O14931 201 aa10.2□□□□□ -0.78
RPL28-211ENST00000560881 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
RPL28-211ENST00000560881 SOSTDC1Q6X4U4 206 aa10.19□□□□□ -0.78
RPL28-211ENST00000560881 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
RPL28-211ENST00000560881 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
RPL28-211ENST00000560881 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
RPL28-211ENST00000560881 IGLV1-50A0A075B6I6 118 aa10.16□□□□□ -0.78
RPL28-211ENST00000560881 SPINK6Q6UWN8 80 aa10.16□□□□□ -0.78
RPL28-211ENST00000560881 PPDPFQ9H3Y8 114 aa10.15□□□□□ -0.78
RPL28-211ENST00000560881 LINC00643Q86TS7 51 aa10.15□□□□□ -0.79
RPL28-211ENST00000560881 M0R378 163 aa10.14□□□□□ -0.79
RPL28-211ENST00000560881 BCE1O60756 84 aa10.13□□□□□ -0.79
RPL28-211ENST00000560881 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
RPL28-211ENST00000560881 TRACP01848 142 aa10.12□□□□□ -0.79
RPL28-211ENST00000560881 LINC00308Q8TCZ7 52 aa10.12□□□□□ -0.79
RPL28-211ENST00000560881 TRBV10-3A0A0K0K1G6 114 aa10.1□□□□□ -0.79
RPL28-211ENST00000560881 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
RPL28-211ENST00000560881 DMBT1Q9UGM3 2413 aaPredicted RBP10.1□□□□□ -0.79
RPL28-211ENST00000560881 FAM236AA0A1B0GUQ0 79 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 FAM236BA0A1B0GV22 79 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 ZNF861PO60384 105 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 TNXBP22105 4242 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 C3orf22Q8N5N4 141 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 H0Y9J4 135 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 J3QL48 77 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 NDUFC2O95298 119 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 OXTP01178 125 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 PRLHP81277 87 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
RPL28-211ENST00000560881 UQCRQO14949 82 aa10.08□□□□□ -0.8
RPL28-211ENST00000560881 HERC1Q15751 4861 aa10.08□□□□□ -0.8
RPL28-211ENST00000560881 UBE2AP49459 152 aa10.07□□□□□ -0.8
RPL28-211ENST00000560881 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
RPL28-211ENST00000560881 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms