RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 TRAV23DV6A0A075B6W5 121 aa7.11□□□□□ -1.27
SNX1-212ENST00000560861 A0A1B0GVY2 172 aa7.11□□□□□ -1.27
SNX1-212ENST00000560861 UBE2V1Q13404 147 aa7.11□□□□□ -1.27
SNX1-212ENST00000560861 LYRM7Q5U5X0 104 aa7.11□□□□□ -1.27
SNX1-212ENST00000560861 MRPL55Q7Z7F7 128 aaKnown RBP7.11□□□□□ -1.27
SNX1-212ENST00000560861 KCNQ1DNQ9H478 68 aa7.11□□□□□ -1.27
SNX1-212ENST00000560861 GAGE10A6NGK3 116 aa7.1□□□□□ -1.27
SNX1-212ENST00000560861 M0QXV9 152 aa7.1□□□□□ -1.27
SNX1-212ENST00000560861 CLEC2BQ92478 149 aa7.1□□□□□ -1.27
SNX1-212ENST00000560861 FAM218AQ96MZ4 157 aa7.1□□□□□ -1.27
SNX1-212ENST00000560861 DYNC1H1Q14204 4646 aaKnown RBP7.1□□□□□ -1.27
SNX1-212ENST00000560861 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
SNX1-212ENST00000560861 LST1O00453 97 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 COX6CP09669 75 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 SCGB1C2P0DMR2 95 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 SPRR1AP35321 89 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 PLAC8Q9NZF1 115 aa7.09□□□□□ -1.27
SNX1-212ENST00000560861 A0A087WYN8 130 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 TRBV7-6A0A0J9YX20 115 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 H0YGX0 51 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 PRYO14603 147 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 ZNF73O43830 326 aaPredicted RBP7.08□□□□□ -1.28
SNX1-212ENST00000560861 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 Q6ZSA8 131 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 GTF2H5Q6ZYL4 71 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
SNX1-212ENST00000560861 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
SNX1-212ENST00000560861 PHF5AQ7RTV0 110 aaKnown RBP7.07□□□□□ -1.28
SNX1-212ENST00000560861 DIRC1Q969H9 104 aa7.07□□□□□ -1.28
SNX1-212ENST00000560861 CBY1Q9Y3M2 126 aa7.07□□□□□ -1.28
SNX1-212ENST00000560861 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
SNX1-212ENST00000560861 RPL37AP8A6NKH3 93 aa7.06□□□□□ -1.28
SNX1-212ENST00000560861 H3BMG7 143 aa7.06□□□□□ -1.28
SNX1-212ENST00000560861 ATXN8Q156A1 80 aa7.06□□□□□ -1.28
SNX1-212ENST00000560861 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
SNX1-212ENST00000560861 TRACP01848 142 aa7.05□□□□□ -1.28
SNX1-212ENST00000560861 ELOF1P60002 83 aaKnown RBP7.05□□□□□ -1.28
SNX1-212ENST00000560861 LINC01600Q96MT4 127 aa7.05□□□□□ -1.28
SNX1-212ENST00000560861 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
SNX1-212ENST00000560861 A0A1B0GX51 115 aa7.04□□□□□ -1.28
SNX1-212ENST00000560861 COX7BP24311 80 aa7.04□□□□□ -1.28
SNX1-212ENST00000560861 LINC00575Q6W349 94 aa7.04□□□□□ -1.28
SNX1-212ENST00000560861 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.28
SNX1-212ENST00000560861 B5MCH6 92 aa7.02□□□□□ -1.29
SNX1-212ENST00000560861 REG3GQ6UW15 175 aa7.02□□□□□ -1.29
SNX1-212ENST00000560861 C9JAW5 83 aa7□□□□□ -1.29
SNX1-212ENST00000560861 Q6ZRX8 168 aa7□□□□□ -1.29
SNX1-212ENST00000560861 MTURNQ8N3F0 131 aa7□□□□□ -1.29
SNX1-212ENST00000560861 CIRBP-AS1Q8TBR5 109 aa7□□□□□ -1.29
SNX1-212ENST00000560861 F8W1H4 67 aa6.99□□□□□ -1.29
SNX1-212ENST00000560861 INAFM2P0DMQ5 153 aa6.99□□□□□ -1.29
SNX1-212ENST00000560861 UBE2BP63146 152 aa6.99□□□□□ -1.29
SNX1-212ENST00000560861 SCXQ7RTU7 201 aa6.99□□□□□ -1.29
SNX1-212ENST00000560861 DPH3Q96FX2 82 aa6.99□□□□□ -1.29
SNX1-212ENST00000560861 Q9BRP9 147 aa6.99□□□□□ -1.29
SNX1-212ENST00000560861 ETDCA0A1B0GVM5 59 aa6.98□□□□□ -1.29
SNX1-212ENST00000560861 hADV29S1A0JD25 119 aa6.98□□□□□ -1.29
SNX1-212ENST00000560861 SLC25A20O43772 301 aa6.98□□□□□ -1.29
SNX1-212ENST00000560861 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
SNX1-212ENST00000560861 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
SNX1-212ENST00000560861 H0Y9J4 135 aa6.97□□□□□ -1.29
SNX1-212ENST00000560861 H3BT86 120 aa6.97□□□□□ -1.29
SNX1-212ENST00000560861 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
SNX1-212ENST00000560861 BCE1O60756 84 aa6.96□□□□□ -1.3
SNX1-212ENST00000560861 SMCR5Q8TEV8 140 aa6.96□□□□□ -1.3
SNX1-212ENST00000560861 BAALC-AS2P0C853 105 aa6.95□□□□□ -1.3
SNX1-212ENST00000560861 PRLHP81277 87 aa6.95□□□□□ -1.3
SNX1-212ENST00000560861 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.95□□□□□ -1.3
SNX1-212ENST00000560861 ANKRD29Q8N6D5 301 aa6.95□□□□□ -1.3
SNX1-212ENST00000560861 DHRS4-AS1Q9P1J3 65 aa6.95□□□□□ -1.3
SNX1-212ENST00000560861 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
SNX1-212ENST00000560861 RYR1P21817 5038 aa6.95□□□□□ -1.3
SNX1-212ENST00000560861 ERC2-IT1O76042 136 aa6.94□□□□□ -1.3
SNX1-212ENST00000560861 DNAL4O96015 105 aa6.94□□□□□ -1.3
SNX1-212ENST00000560861 LINC01547P58512 204 aaPredicted RBP6.94□□□□□ -1.3
SNX1-212ENST00000560861 Q6ZQY7 126 aa6.94□□□□□ -1.3
SNX1-212ENST00000560861 FAM19A1Q7Z5A9 133 aa6.94□□□□□ -1.3
SNX1-212ENST00000560861 HAMPP81172 84 aa6.93□□□□□ -1.3
SNX1-212ENST00000560861 ORMDL1Q9P0S3 153 aa6.93□□□□□ -1.3
SNX1-212ENST00000560861 XGP55808 180 aa6.92□□□□□ -1.3
SNX1-212ENST00000560861 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
SNX1-212ENST00000560861 SNCGO76070 127 aa6.91□□□□□ -1.3
SNX1-212ENST00000560861 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
SNX1-212ENST00000560861 OCIAD2Q56VL3 154 aa6.91□□□□□ -1.3
SNX1-212ENST00000560861 TEN1Q86WV5 123 aa6.91□□□□□ -1.3
SNX1-212ENST00000560861 HSPG2P98160 4391 aa6.91□□□□□ -1.3
SNX1-212ENST00000560861 ABCA13Q86UQ4 5058 aa6.91□□□□□ -1.3
SNX1-212ENST00000560861 ST20-AS1Q8NBB2 130 aa6.9□□□□□ -1.3
SNX1-212ENST00000560861 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.31
SNX1-212ENST00000560861 H3BQ85 93 aa6.89□□□□□ -1.31
SNX1-212ENST00000560861 UBE2AP49459 152 aa6.89□□□□□ -1.31
SNX1-212ENST00000560861 C1orf137Q5JT78 98 aa6.89□□□□□ -1.31
SNX1-212ENST00000560861 XP32Q5T750 250 aa6.89□□□□□ -1.31
SNX1-212ENST00000560861 OBSCN-AS1Q96MR7 158 aa6.89□□□□□ -1.31
SNX1-212ENST00000560861 TMEM256-PLSCR3K7ERE1 68 aa6.88□□□□□ -1.31
SNX1-212ENST00000560861 Q8N377 158 aa6.88□□□□□ -1.31
SNX1-212ENST00000560861 ZNF861PO60384 105 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms