RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SORL1Q92673 2214 aa3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 ZFHX4Q86UP3 3567 aa3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 PTPRZ1P23471 2315 aaPredicted RBP3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 A0A1W2PNM2 257 aa3.85□□□□□ -1.79
SNRPA1-209ENST00000560307 C3orf84H3BNL1 204 aa3.85□□□□□ -1.79
SNRPA1-209ENST00000560307 DSCR10P59022 87 aa3.85□□□□□ -1.79
SNRPA1-209ENST00000560307 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
SNRPA1-209ENST00000560307 B9D2Q9BPU9 175 aa3.85□□□□□ -1.79
SNRPA1-209ENST00000560307 WFDC10AQ9H1F0 79 aa3.85□□□□□ -1.79
SNRPA1-209ENST00000560307 LINC00588Q9Y4M8 146 aa3.85□□□□□ -1.79
SNRPA1-209ENST00000560307 MGAQ8IWI9 3026 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 LOC101927531A0A1B0GV80 90 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 TLX1NBP0CAT3 122 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 SPRR1AP35321 89 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 XAGE1AQ9HD64 81 aa3.84□□□□□ -1.79
SNRPA1-209ENST00000560307 IGKV2D-30A0A075B6S6 120 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 A0A096LPF7 62 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 A8MUN3 132 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 H3BNG1 76 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 KRTAP26-1Q6PEX3 210 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 Q6ZRX8 168 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 PHF5AQ7RTV0 110 aaKnown RBP3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 NKAPP1Q8N9T2 125 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 LINC00208Q96KT6 92 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SNRPA1-209ENST00000560307 BDP1A6H8Y1 2624 aa3.82□□□□□ -1.8
SNRPA1-209ENST00000560307 TLN1Q9Y490 2541 aaKnown RBP3.82□□□□□ -1.8
SNRPA1-209ENST00000560307 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
SNRPA1-209ENST00000560307 K7EQZ3 153 aa3.82□□□□□ -1.8
SNRPA1-209ENST00000560307 PSPHP1O15172 72 aa3.82□□□□□ -1.8
SNRPA1-209ENST00000560307 APOC4P55056 127 aa3.82□□□□□ -1.8
SNRPA1-209ENST00000560307 CELSR1Q9NYQ6 3014 aa3.81□□□□□ -1.8
SNRPA1-209ENST00000560307 IGLV8-61A0A075B6I0 122 aa3.81□□□□□ -1.8
SNRPA1-209ENST00000560307 C15orf56Q8N910 161 aa3.81□□□□□ -1.8
SNRPA1-209ENST00000560307 ST20-AS1Q8NBB2 130 aa3.81□□□□□ -1.8
SNRPA1-209ENST00000560307 ZNF292O60281 2723 aa3.81□□□□□ -1.8
SNRPA1-209ENST00000560307 SPTAN1Q13813 2472 aaKnown RBP3.81□□□□□ -1.8
SNRPA1-209ENST00000560307 ATMQ13315 3056 aa3.81□□□□□ -1.8
SNRPA1-209ENST00000560307 RPL37AP8A6NKH3 93 aa3.8□□□□□ -1.8
SNRPA1-209ENST00000560307 SPART-AS1P0CW21 52 aa3.8□□□□□ -1.8
SNRPA1-209ENST00000560307 DEFB113Q30KQ7 82 aa3.8□□□□□ -1.8
SNRPA1-209ENST00000560307 C7orf33Q8WU49 177 aa3.8□□□□□ -1.8
SNRPA1-209ENST00000560307 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
SNRPA1-209ENST00000560307 HIVEP3Q5T1R4 2406 aa3.8□□□□□ -1.8
SNRPA1-209ENST00000560307 IGKV2D-24A0A075B6R9 120 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 A6NN06 94 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 C16orf90A8MZG2 172 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 CHKB-CPT1BH3BT56 60 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 C9orf163Q8N9P6 203 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 Q8NAQ8 132 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 MAPK1IP1LQ8NDC0 245 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 C11orf45Q8TAV5 145 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 SPTA1P02549 2419 aa3.79□□□□□ -1.8
SNRPA1-209ENST00000560307 DMXL1Q9Y485 3027 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 IGLV1-50A0A075B6I6 118 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 H0Y9P7 68 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 DEFB105AQ8NG35 78 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 PRR15LQ9BU68 103 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 RETNQ9HD89 108 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 RBM12B-AS1Q9P1G2 102 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
SNRPA1-209ENST00000560307 IGLV7-46A0A075B6I9 117 aa3.77□□□□□ -1.81
SNRPA1-209ENST00000560307 C7orf65Q6ZTY9 151 aa3.77□□□□□ -1.81
SNRPA1-209ENST00000560307 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SNRPA1-209ENST00000560307 PLAC8Q9NZF1 115 aa3.77□□□□□ -1.81
SNRPA1-209ENST00000560307 WNK1Q9H4A3 2382 aa3.77□□□□□ -1.81
SNRPA1-209ENST00000560307 AKAP6Q13023 2319 aa3.76□□□□□ -1.81
SNRPA1-209ENST00000560307 LINC01556Q5JQF7 62 aa3.76□□□□□ -1.81
SNRPA1-209ENST00000560307 A0A087X002 238 aa3.75□□□□□ -1.81
SNRPA1-209ENST00000560307 A6NED7 52 aa3.75□□□□□ -1.81
SNRPA1-209ENST00000560307 PRB1P04280 392 aa3.75□□□□□ -1.81
SNRPA1-209ENST00000560307 ASB16-AS1Q495Z4 193 aa3.75□□□□□ -1.81
SNRPA1-209ENST00000560307 CASC2Q6XLA1 102 aa3.75□□□□□ -1.81
SNRPA1-209ENST00000560307 LCA10Q71F78 164 aa3.75□□□□□ -1.81
SNRPA1-209ENST00000560307 COA5Q86WW8 74 aa3.75□□□□□ -1.81
SNRPA1-209ENST00000560307 A8MWP4 228 aa3.74□□□□□ -1.81
SNRPA1-209ENST00000560307 PRR4Q16378 134 aa3.74□□□□□ -1.81
SNRPA1-209ENST00000560307 DEFB135Q30KP9 77 aa3.74□□□□□ -1.81
SNRPA1-209ENST00000560307 IGFL1Q6UW32 110 aa3.74□□□□□ -1.81
SNRPA1-209ENST00000560307 WFDC13Q8IUB5 93 aa3.74□□□□□ -1.81
SNRPA1-209ENST00000560307 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
SNRPA1-209ENST00000560307 ASPMQ8IZT6 3477 aa3.74□□□□□ -1.81
SNRPA1-209ENST00000560307 SPRR1BP22528 89 aa3.73□□□□□ -1.81
SNRPA1-209ENST00000560307 CNBPP62633 177 aaKnown RBP3.73□□□□□ -1.81
SNRPA1-209ENST00000560307 WFDC10BQ8IUB3 73 aa3.73□□□□□ -1.81
SNRPA1-209ENST00000560307 HTN3P15516 51 aa3.72□□□□□ -1.81
SNRPA1-209ENST00000560307 REG3GQ6UW15 175 aa3.72□□□□□ -1.81
SNRPA1-209ENST00000560307 MAP1AP78559 2803 aaPredicted RBP3.71□□□□□ -1.81
SNRPA1-209ENST00000560307 CSPG4Q6UVK1 2322 aa3.71□□□□□ -1.82
SNRPA1-209ENST00000560307 NOTCH3Q9UM47 2321 aa3.71□□□□□ -1.82
SNRPA1-209ENST00000560307 ASH1LQ9NR48 2969 aaKnown RBP3.71□□□□□ -1.82
SNRPA1-209ENST00000560307 MOBPQ13875 183 aa3.71□□□□□ -1.82
SNRPA1-209ENST00000560307 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.82
SNRPA1-209ENST00000560307 CREBBPQ92793 2442 aa3.71□□□□□ -1.82
SNRPA1-209ENST00000560307 A0A087WSZ3 146 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms