RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 PRB2P02812 416 aaPredicted RBP12.56□□□□□ -0.4
PDE8A-211ENST00000559742 SCXQ7RTU7 201 aa12.56□□□□□ -0.4
PDE8A-211ENST00000559742 NREPQ16612 68 aa12.56□□□□□ -0.4
PDE8A-211ENST00000559742 FAM229BQ4G0N7 80 aa12.56□□□□□ -0.4
PDE8A-211ENST00000559742 A0A0J9YWU9 116 aa12.55□□□□□ -0.4
PDE8A-211ENST00000559742 PDE6GP18545 87 aa12.55□□□□□ -0.4
PDE8A-211ENST00000559742 COX17Q14061 63 aa12.55□□□□□ -0.4
PDE8A-211ENST00000559742 C1orf195Q5TG92 126 aa12.55□□□□□ -0.4
PDE8A-211ENST00000559742 PRR34Q9NV39 138 aa12.55□□□□□ -0.4
PDE8A-211ENST00000559742 TMEM254Q8TBM7 123 aa12.54□□□□□ -0.4
PDE8A-211ENST00000559742 MUC7Q8TAX7 377 aa12.53□□□□□ -0.4
PDE8A-211ENST00000559742 Q6ZQY7 126 aa12.52□□□□□ -0.4
PDE8A-211ENST00000559742 HIGD2BQ4VC39 106 aa12.52□□□□□ -0.41
PDE8A-211ENST00000559742 MPLKIPQ8TAP9 179 aa12.52□□□□□ -0.41
PDE8A-211ENST00000559742 V9GYY9 64 aa12.51□□□□□ -0.41
PDE8A-211ENST00000559742 EGFEM1PQ0D2K5 195 aa12.5□□□□□ -0.41
PDE8A-211ENST00000559742 XAGE1AQ9HD64 81 aa12.5□□□□□ -0.41
PDE8A-211ENST00000559742 BPY2O14599 106 aa12.49□□□□□ -0.41
PDE8A-211ENST00000559742 ERC2-IT1O76042 136 aa12.49□□□□□ -0.41
PDE8A-211ENST00000559742 ESRGQ1W209 222 aa12.49□□□□□ -0.41
PDE8A-211ENST00000559742 MGAM2Q2M2H8 2515 aa12.49□□□□□ -0.41
PDE8A-211ENST00000559742 DNAH3Q8TD57 4116 aa12.47□□□□□ -0.41
PDE8A-211ENST00000559742 SEC61GP60059 68 aa12.47□□□□□ -0.41
PDE8A-211ENST00000559742 DEFB131BA0A096LNP1 70 aa12.46□□□□□ -0.41
PDE8A-211ENST00000559742 C11orf45Q8TAV5 145 aa12.46□□□□□ -0.42
PDE8A-211ENST00000559742 C6orf48Q9UBA6 75 aa12.46□□□□□ -0.42
PDE8A-211ENST00000559742 H3BQ85 93 aa12.45□□□□□ -0.42
PDE8A-211ENST00000559742 PRYO14603 147 aa12.44□□□□□ -0.42
PDE8A-211ENST00000559742 IGLV6-57P01721 117 aa12.44□□□□□ -0.42
PDE8A-211ENST00000559742 CAMK2N2Q96S95 79 aa12.41□□□□□ -0.42
PDE8A-211ENST00000559742 LYSTQ99698 3801 aa12.41□□□□□ -0.42
PDE8A-211ENST00000559742 FUSP35637 526 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDE8A-211ENST00000559742 H3BNG1 76 aa12.4□□□□□ -0.42
PDE8A-211ENST00000559742 Q8N9L7 120 aa12.4□□□□□ -0.42
PDE8A-211ENST00000559742 OCR1Q9BZK8 76 aa12.4□□□□□ -0.42
PDE8A-211ENST00000559742 IGKV2D-24A0A075B6R9 120 aa12.4□□□□□ -0.42
PDE8A-211ENST00000559742 IGKV4-1P06312 121 aa12.38□□□□□ -0.43
PDE8A-211ENST00000559742 KRTAP26-1Q6PEX3 210 aa12.37□□□□□ -0.43
PDE8A-211ENST00000559742 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.37□□□□□ -0.43
PDE8A-211ENST00000559742 Q6ZRU5 148 aa12.37□□□□□ -0.43
PDE8A-211ENST00000559742 COL7A1Q02388 2944 aa12.37□□□□□ -0.43
PDE8A-211ENST00000559742 C15orf56Q8N910 161 aa12.36□□□□□ -0.43
PDE8A-211ENST00000559742 DIRC1Q969H9 104 aa12.36□□□□□ -0.43
PDE8A-211ENST00000559742 COX7BP24311 80 aa12.35□□□□□ -0.43
PDE8A-211ENST00000559742 HUWE1Q7Z6Z7 4374 aaKnown RBP12.34□□□□□ -0.43
PDE8A-211ENST00000559742 STAB2Q8WWQ8 2551 aa12.34□□□□□ -0.43
PDE8A-211ENST00000559742 HIGD2AQ9BW72 106 aa12.34□□□□□ -0.43
PDE8A-211ENST00000559742 GVQW2A0A096LPI5 108 aaPredicted RBP12.33□□□□□ -0.44
PDE8A-211ENST00000559742 LINC01556Q5JQF7 62 aa12.3□□□□□ -0.44
PDE8A-211ENST00000559742 ZNF73O43830 326 aaPredicted RBP12.29□□□□□ -0.44
PDE8A-211ENST00000559742 ELOF1P60002 83 aaKnown RBP12.29□□□□□ -0.44
PDE8A-211ENST00000559742 TENM2Q9NT68 2774 aa12.28□□□□□ -0.44
PDE8A-211ENST00000559742 PRR15Q8IV56 129 aa12.28□□□□□ -0.44
PDE8A-211ENST00000559742 hDV103S1A0JD37 113 aa12.27□□□□□ -0.44
PDE8A-211ENST00000559742 Q6ZRP5 223 aa12.27□□□□□ -0.44
PDE8A-211ENST00000559742 K7EIL1 84 aa12.26□□□□□ -0.45
PDE8A-211ENST00000559742 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
PDE8A-211ENST00000559742 VPREB1P12018 145 aa12.25□□□□□ -0.45
PDE8A-211ENST00000559742 CASC10Q5T4H9 136 aa12.25□□□□□ -0.45
PDE8A-211ENST00000559742 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
PDE8A-211ENST00000559742 SYCNQ0VAF6 134 aa12.22□□□□□ -0.45
PDE8A-211ENST00000559742 Q1T7F1 81 aa12.22□□□□□ -0.45
PDE8A-211ENST00000559742 DNAH10Q8IVF4 4471 aa12.22□□□□□ -0.45
PDE8A-211ENST00000559742 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
PDE8A-211ENST00000559742 PMAIP1Q13794 54 aa12.22□□□□□ -0.45
PDE8A-211ENST00000559742 CSMD3Q7Z407 3707 aa12.21□□□□□ -0.46
PDE8A-211ENST00000559742 C3orf84H3BNL1 204 aa12.21□□□□□ -0.46
PDE8A-211ENST00000559742 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.46
PDE8A-211ENST00000559742 SMIM29Q86T20 159 aa12.2□□□□□ -0.46
PDE8A-211ENST00000559742 C1orf64Q8NEQ6 169 aa12.19□□□□□ -0.46
PDE8A-211ENST00000559742 DNAH1Q9P2D7 4330 aa12.18□□□□□ -0.46
PDE8A-211ENST00000559742 LCE6AA0A183 80 aa12.18□□□□□ -0.46
PDE8A-211ENST00000559742 LINC00528Q8N1L1 170 aa12.17□□□□□ -0.46
PDE8A-211ENST00000559742 M0R378 163 aa12.17□□□□□ -0.46
PDE8A-211ENST00000559742 SERTAD4-AS1Q5TG53 156 aa12.16□□□□□ -0.46
PDE8A-211ENST00000559742 MDFIQ99750 246 aa12.15□□□□□ -0.47
PDE8A-211ENST00000559742 FAM168BA1KXE4 195 aa12.13□□□□□ -0.47
PDE8A-211ENST00000559742 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
PDE8A-211ENST00000559742 DNAH7Q8WXX0 4024 aa12.13□□□□□ -0.47
PDE8A-211ENST00000559742 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
PDE8A-211ENST00000559742 ZCCHC13Q8WW36 166 aaKnown RBP12.12□□□□□ -0.47
PDE8A-211ENST00000559742 PSPHP1O15172 72 aa12.12□□□□□ -0.47
PDE8A-211ENST00000559742 RPL37AP8A6NKH3 93 aa12.11□□□□□ -0.47
PDE8A-211ENST00000559742 TRAV22A0A0B4J277 110 aa12.09□□□□□ -0.47
PDE8A-211ENST00000559742 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
PDE8A-211ENST00000559742 DEFB105AQ8NG35 78 aa12.05□□□□□ -0.48
PDE8A-211ENST00000559742 IGLV5-48A0A075B6I7 105 aa12.05□□□□□ -0.48
PDE8A-211ENST00000559742 CYP4F30PQ9H0H9 118 aa12.04□□□□□ -0.48
PDE8A-211ENST00000559742 KRTAP1-5Q9BYS1 174 aa12.04□□□□□ -0.48
PDE8A-211ENST00000559742 ETDCA0A1B0GVM5 59 aa12.03□□□□□ -0.48
PDE8A-211ENST00000559742 Q8N377 158 aa12.03□□□□□ -0.48
PDE8A-211ENST00000559742 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.03□□□□□ -0.48
PDE8A-211ENST00000559742 PRR4Q16378 134 aa12.01□□□□□ -0.49
PDE8A-211ENST00000559742 A0A1W2PNM2 257 aa12.01□□□□□ -0.49
PDE8A-211ENST00000559742 PSCAO43653 123 aa12.01□□□□□ -0.49
PDE8A-211ENST00000559742 A0A1B0GW54 56 aa12□□□□□ -0.49
PDE8A-211ENST00000559742 KRTAP7-1Q8IUC3 87 aa12□□□□□ -0.49
PDE8A-211ENST00000559742 KCNQ1DNQ9H478 68 aa12□□□□□ -0.49
PDE8A-211ENST00000559742 A8MUN3 132 aa11.98□□□□□ -0.49
PDE8A-211ENST00000559742 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms