RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PKHD1L1Q86WI1 4243 aa8.29□□□□□ -1.08
SHMT2-234ENST00000557703 TRAV13-2A0A0B4J235 113 aa8.29□□□□□ -1.08
SHMT2-234ENST00000557703 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
SHMT2-234ENST00000557703 TRAV23DV6A0A075B6W5 121 aa8.28□□□□□ -1.08
SHMT2-234ENST00000557703 KRTAP4-16G5E9R7 235 aaPredicted RBP8.28□□□□□ -1.08
SHMT2-234ENST00000557703 OR13C6PQ8NH95 151 aa8.27□□□□□ -1.09
SHMT2-234ENST00000557703 ZNF73O43830 326 aaPredicted RBP8.26□□□□□ -1.09
SHMT2-234ENST00000557703 RPL13AP40429 203 aaKnown RBP8.26□□□□□ -1.09
SHMT2-234ENST00000557703 TAL2Q16559 108 aa8.26□□□□□ -1.09
SHMT2-234ENST00000557703 C14orf144Q96I85 54 aa8.26□□□□□ -1.09
SHMT2-234ENST00000557703 HIST1H4GQ99525 98 aa8.26□□□□□ -1.09
SHMT2-234ENST00000557703 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
SHMT2-234ENST00000557703 ZNF706Q9Y5V0 76 aaPredicted RBP8.25□□□□□ -1.09
SHMT2-234ENST00000557703 PRLHP81277 87 aa8.24□□□□□ -1.09
SHMT2-234ENST00000557703 Q6ZRX8 168 aa8.24□□□□□ -1.09
SHMT2-234ENST00000557703 B5MCH6 92 aa8.23□□□□□ -1.09
SHMT2-234ENST00000557703 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
SHMT2-234ENST00000557703 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
SHMT2-234ENST00000557703 LRP1Q07954 4544 aaKnown RBP8.22□□□□□ -1.09
SHMT2-234ENST00000557703 A6NDN8 102 aa8.22□□□□□ -1.09
SHMT2-234ENST00000557703 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
SHMT2-234ENST00000557703 A4D1N5 150 aa8.21□□□□□ -1.1
SHMT2-234ENST00000557703 MT1HL1P0DM35 61 aa8.21□□□□□ -1.1
SHMT2-234ENST00000557703 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
SHMT2-234ENST00000557703 DHRS4-AS1Q9P1J3 65 aa8.21□□□□□ -1.1
SHMT2-234ENST00000557703 TMEM238LA0A1B0GVL6 79 aa8.2□□□□□ -1.1
SHMT2-234ENST00000557703 A6NJY4 79 aa8.2□□□□□ -1.1
SHMT2-234ENST00000557703 SMIM6P0DI80 62 aa8.2□□□□□ -1.1
SHMT2-234ENST00000557703 CRYGAP11844 174 aa8.2□□□□□ -1.1
SHMT2-234ENST00000557703 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
SHMT2-234ENST00000557703 FAT3Q8TDW7 4589 aa8.19□□□□□ -1.1
SHMT2-234ENST00000557703 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
SHMT2-234ENST00000557703 A0A1B0GWB2 263 aa8.18□□□□□ -1.1
SHMT2-234ENST00000557703 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
SHMT2-234ENST00000557703 CTAG1AP78358 180 aa8.17□□□□□ -1.1
SHMT2-234ENST00000557703 VAMP3Q15836 100 aa8.17□□□□□ -1.1
SHMT2-234ENST00000557703 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
SHMT2-234ENST00000557703 COX7BP24311 80 aa8.16□□□□□ -1.1
SHMT2-234ENST00000557703 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
SHMT2-234ENST00000557703 CEND1Q8N111 149 aa8.16□□□□□ -1.1
SHMT2-234ENST00000557703 SPRR4Q96PI1 79 aa8.16□□□□□ -1.1
SHMT2-234ENST00000557703 NHP2Q9NX24 153 aaKnown RBP8.16□□□□□ -1.1
SHMT2-234ENST00000557703 A0A0B4J2C4 111 aa8.15□□□□□ -1.1
SHMT2-234ENST00000557703 Q9BRP9 147 aa8.15□□□□□ -1.1
SHMT2-234ENST00000557703 HSD52Q0P140 79 aa8.14□□□□□ -1.11
SHMT2-234ENST00000557703 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
SHMT2-234ENST00000557703 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
SHMT2-234ENST00000557703 BVES-AS1Q5T3Y7 98 aa8.13□□□□□ -1.11
SHMT2-234ENST00000557703 SMIM11BQ8TCY0 68 aa8.13□□□□□ -1.11
SHMT2-234ENST00000557703 RAB37Q96AX2 223 aa8.13□□□□□ -1.11
SHMT2-234ENST00000557703 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
SHMT2-234ENST00000557703 CFC1P0CG37 223 aa8.12□□□□□ -1.11
SHMT2-234ENST00000557703 TNXBP22105 4242 aa8.11□□□□□ -1.11
SHMT2-234ENST00000557703 HERC1Q15751 4861 aa8.11□□□□□ -1.11
SHMT2-234ENST00000557703 SLC25A20O43772 301 aa8.11□□□□□ -1.11
SHMT2-234ENST00000557703 TYMSOSQ8TAI1 123 aa8.11□□□□□ -1.11
SHMT2-234ENST00000557703 A0A087X002 238 aa8.1□□□□□ -1.11
SHMT2-234ENST00000557703 SNCGO76070 127 aa8.1□□□□□ -1.11
SHMT2-234ENST00000557703 ERC2-IT1O76042 136 aa8.09□□□□□ -1.11
SHMT2-234ENST00000557703 PRO1854Q9UHT4 67 aa8.09□□□□□ -1.11
SHMT2-234ENST00000557703 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
SHMT2-234ENST00000557703 SPRR1BP22528 89 aa8.08□□□□□ -1.12
SHMT2-234ENST00000557703 H0YGX0 51 aa8.07□□□□□ -1.12
SHMT2-234ENST00000557703 GAGE2AQ6NT46 116 aa8.07□□□□□ -1.12
SHMT2-234ENST00000557703 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
SHMT2-234ENST00000557703 TSTD3H0UI37 97 aa8.06□□□□□ -1.12
SHMT2-234ENST00000557703 FXYD2P54710 66 aa8.06□□□□□ -1.12
SHMT2-234ENST00000557703 KRTAP13-2Q52LG2 175 aa8.06□□□□□ -1.12
SHMT2-234ENST00000557703 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
SHMT2-234ENST00000557703 C12orf57Q99622 126 aa8.06□□□□□ -1.12
SHMT2-234ENST00000557703 ANAPC11Q9NYG5 84 aa8.06□□□□□ -1.12
SHMT2-234ENST00000557703 TEX49A0A1B0GTD5 131 aa8.05□□□□□ -1.12
SHMT2-234ENST00000557703 LINC00575Q6W349 94 aa8.05□□□□□ -1.12
SHMT2-234ENST00000557703 IGLV5-48A0A075B6I7 105 aa8.03□□□□□ -1.12
SHMT2-234ENST00000557703 A0A1B0GX51 115 aa8.03□□□□□ -1.12
SHMT2-234ENST00000557703 hADV29S1A0JD25 119 aa8.03□□□□□ -1.12
SHMT2-234ENST00000557703 M0R143 59 aa8.03□□□□□ -1.12
SHMT2-234ENST00000557703 GHRHP01286 108 aa8.03□□□□□ -1.12
SHMT2-234ENST00000557703 PPDPFLQ8WWR9 84 aa8.03□□□□□ -1.12
SHMT2-234ENST00000557703 LAMTOR3Q9UHA4 124 aa8.03□□□□□ -1.12
SHMT2-234ENST00000557703 Q1RN00 199 aa8.02□□□□□ -1.13
SHMT2-234ENST00000557703 OCIAD2Q56VL3 154 aa8.02□□□□□ -1.13
SHMT2-234ENST00000557703 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
SHMT2-234ENST00000557703 COX6CP09669 75 aa8.01□□□□□ -1.13
SHMT2-234ENST00000557703 C4orf48Q5BLP8 95 aa8.01□□□□□ -1.13
SHMT2-234ENST00000557703 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.01□□□□□ -1.13
SHMT2-234ENST00000557703 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
SHMT2-234ENST00000557703 H7C2G1 150 aa8□□□□□ -1.13
SHMT2-234ENST00000557703 C3orf22Q8N5N4 141 aa8□□□□□ -1.13
SHMT2-234ENST00000557703 ST20-AS1Q8NBB2 130 aa8□□□□□ -1.13
SHMT2-234ENST00000557703 SPINK1P00995 79 aa7.98□□□□□ -1.13
SHMT2-234ENST00000557703 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
SHMT2-234ENST00000557703 Q8NBF4 154 aa7.98□□□□□ -1.13
SHMT2-234ENST00000557703 H3BQ85 93 aa7.97□□□□□ -1.13
SHMT2-234ENST00000557703 LINC01547P58512 204 aaPredicted RBP7.97□□□□□ -1.13
SHMT2-234ENST00000557703 IGLV9-49A0A0B4J1Y8 123 aa7.96□□□□□ -1.14
SHMT2-234ENST00000557703 MOBPQ13875 183 aa7.96□□□□□ -1.14
SHMT2-234ENST00000557703 Q6ZQY7 126 aa7.96□□□□□ -1.14
SHMT2-234ENST00000557703 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.14
SHMT2-234ENST00000557703 TRIAP1O43715 76 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms