RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 CYP4F30PQ9H0H9 118 aa2.44□□□□□ -2.02
GPHN-215ENST00000557654 CEP250Q9BV73 2442 aa2.44□□□□□ -2.02
GPHN-215ENST00000557654 MED13LQ71F56 2210 aa2.44□□□□□ -2.02
GPHN-215ENST00000557654 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
GPHN-215ENST00000557654 ELOF1P60002 83 aaKnown RBP2.43□□□□□ -2.02
GPHN-215ENST00000557654 KALRNO60229 2985 aa2.43□□□□□ -2.02
GPHN-215ENST00000557654 SPENQ96T58 3664 aaKnown RBP2.42□□□□□ -2.02
GPHN-215ENST00000557654 LYRM9A8MSI8 78 aa2.42□□□□□ -2.02
GPHN-215ENST00000557654 ZNF73O43830 326 aaPredicted RBP2.42□□□□□ -2.02
GPHN-215ENST00000557654 SYCNQ0VAF6 134 aa2.42□□□□□ -2.02
GPHN-215ENST00000557654 DEFB136Q30KP8 78 aa2.42□□□□□ -2.02
GPHN-215ENST00000557654 CCL19Q99731 98 aa2.42□□□□□ -2.02
GPHN-215ENST00000557654 NCOR1O75376 2440 aa2.42□□□□□ -2.02
GPHN-215ENST00000557654 OTOGLQ3ZCN5 2332 aa2.42□□□□□ -2.02
GPHN-215ENST00000557654 DCHS1Q96JQ0 3298 aa2.42□□□□□ -2.02
GPHN-215ENST00000557654 WDFY4Q6ZS81 3184 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 CD164Q04900 197 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 SPAG11BQ08648 103 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 SCXQ7RTU7 201 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 LINC00269Q8N2A0 174 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 HIGD2AQ9BW72 106 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 ABCA2Q9BZC7 2435 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 PCNX1Q96RV3 2341 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 RP1L1Q8IWN7 2480 aaPredicted RBP2.41□□□□□ -2.02
GPHN-215ENST00000557654 TRIOBPQ9H2D6 2365 aa2.41□□□□□ -2.02
GPHN-215ENST00000557654 DMXL2Q8TDJ6 3036 aa2.4□□□□□ -2.02
GPHN-215ENST00000557654 IGLV5-48A0A075B6I7 105 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 ETDCA0A1B0GVM5 59 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 M0R378 163 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 DAD1P61803 113 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 C9orf116Q5BN46 136 aaPredicted RBP2.4□□□□□ -2.03
GPHN-215ENST00000557654 KRTAP13-1Q8IUC0 172 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 C1orf64Q8NEQ6 169 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 LOC400499M0QZD8 3231 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 CACNA1HO95180 2353 aa2.4□□□□□ -2.03
GPHN-215ENST00000557654 MAP1BP46821 2468 aaKnown RBP2.4□□□□□ -2.03
GPHN-215ENST00000557654 SMG1Q96Q15 3661 aaKnown RBP2.39□□□□□ -2.03
GPHN-215ENST00000557654 EP300Q09472 2414 aaPredicted RBP2.39□□□□□ -2.03
GPHN-215ENST00000557654 TRAV22A0A0B4J277 110 aa2.39□□□□□ -2.03
GPHN-215ENST00000557654 PSCAO43653 123 aa2.39□□□□□ -2.03
GPHN-215ENST00000557654 NDUFB1O75438 58 aa2.39□□□□□ -2.03
GPHN-215ENST00000557654 IGLV1-51P01701 117 aa2.39□□□□□ -2.03
GPHN-215ENST00000557654 UNQ6190/PRO20217Q6UXQ8 127 aa2.39□□□□□ -2.03
GPHN-215ENST00000557654 PIEZO2Q9H5I5 2752 aa2.39□□□□□ -2.03
GPHN-215ENST00000557654 PRRC2CQ9Y520 2896 aaKnown RBP2.39□□□□□ -2.03
GPHN-215ENST00000557654 ADGRG4Q8IZF6 3080 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 ZFHX4Q86UP3 3567 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 BSNQ9UPA5 3926 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
GPHN-215ENST00000557654 UBE2BP63146 152 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 CLPSL2Q6UWE3 100 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 SPANXA2-OT1Q8N9U9 137 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 C6orf48Q9UBA6 75 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 SPTBN1Q01082 2364 aaKnown RBP2.38□□□□□ -2.03
GPHN-215ENST00000557654 COL6A6A6NMZ7 2263 aa2.38□□□□□ -2.03
GPHN-215ENST00000557654 A0A1W2PNM2 257 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 H3BPC8 53 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 LELP1Q5T871 98 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 Q5VV11 94 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 SPRR4Q96PI1 79 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 Q9BRP9 147 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 LIMD2Q9BT23 127 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 KCNQ1DNQ9H478 68 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 LINC00588Q9Y4M8 146 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 PTPRQQ9UMZ3 2332 aa2.37□□□□□ -2.03
GPHN-215ENST00000557654 HRNRQ86YZ3 2850 aaPredicted RBP2.36□□□□□ -2.03
GPHN-215ENST00000557654 ACACAQ13085 2346 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 IGLV10-54A0A075B6I4 117 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 LOC101927531A0A1B0GV80 90 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 HCG22E2RYF7 251 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 NDUFS5O43920 106 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 DEFB130BP0DP73 79 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 DEFB130AP0DP74 79 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 ATP11AUNQ6ZP68 121 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 DMDP11532 3685 aa2.36□□□□□ -2.03
GPHN-215ENST00000557654 CSMD1Q96PZ7 3565 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 PTPRZ1P23471 2315 aaPredicted RBP2.35□□□□□ -2.03
GPHN-215ENST00000557654 A8MUN3 132 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 PSPHP1O15172 72 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 MP68P56378 58 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
GPHN-215ENST00000557654 B9D2Q9BPU9 175 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 WFDC10AQ9H1F0 79 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 ANKRD11Q6UB99 2663 aaPredicted RBP2.35□□□□□ -2.03
GPHN-215ENST00000557654 TACC2O95359 2948 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 DCHS2Q6V1P9 2916 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 SORL1Q92673 2214 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 CR1P17927 2039 aa2.35□□□□□ -2.03
GPHN-215ENST00000557654 C3orf84H3BNL1 204 aa2.34□□□□□ -2.03
GPHN-215ENST00000557654 SPRR1AP35321 89 aa2.34□□□□□ -2.03
GPHN-215ENST00000557654 C1orf137Q5JT78 98 aa2.34□□□□□ -2.03
GPHN-215ENST00000557654 KRTAP26-1Q6PEX3 210 aa2.34□□□□□ -2.03
GPHN-215ENST00000557654 MRPL55Q7Z7F7 128 aaKnown RBP2.34□□□□□ -2.03
GPHN-215ENST00000557654 ST20-AS1Q8NBB2 130 aa2.34□□□□□ -2.03
GPHN-215ENST00000557654 CAMK2N2Q96S95 79 aa2.34□□□□□ -2.03
GPHN-215ENST00000557654 MGAQ8IWI9 3026 aa2.33□□□□□ -2.04
GPHN-215ENST00000557654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.33□□□□□ -2.047e-9■□□□□ 8.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms