RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 NREPQ16612 68 aa10.76□□□□□ -0.69
SHMT2-232ENST00000557487 BPY2O14599 106 aa10.75□□□□□ -0.69
SHMT2-232ENST00000557487 C15orf56Q8N910 161 aa10.75□□□□□ -0.69
SHMT2-232ENST00000557487 RMI2Q96E14 147 aa10.75□□□□□ -0.69
SHMT2-232ENST00000557487 F8WEM9 126 aa10.74□□□□□ -0.69
SHMT2-232ENST00000557487 WFDC10BQ8IUB3 73 aa10.74□□□□□ -0.69
SHMT2-232ENST00000557487 TM2D3Q9BRN9 247 aa10.74□□□□□ -0.69
SHMT2-232ENST00000557487 SNURFQ9Y675 71 aa10.74□□□□□ -0.69
SHMT2-232ENST00000557487 SMIM26A0A096LP01 95 aa10.73□□□□□ -0.69
SHMT2-232ENST00000557487 KPRPQ5T749 579 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-232ENST00000557487 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
SHMT2-232ENST00000557487 HRCT1Q6UXD1 115 aa10.72□□□□□ -0.69
SHMT2-232ENST00000557487 SCXQ7RTU7 201 aa10.72□□□□□ -0.69
SHMT2-232ENST00000557487 C1orf43Q9BWL3 253 aa10.72□□□□□ -0.69
SHMT2-232ENST00000557487 TMEM254Q8TBM7 123 aa10.71□□□□□ -0.69
SHMT2-232ENST00000557487 IGKV4-1P06312 121 aa10.7□□□□□ -0.7
SHMT2-232ENST00000557487 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
SHMT2-232ENST00000557487 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
SHMT2-232ENST00000557487 LINC01556Q5JQF7 62 aa10.69□□□□□ -0.7
SHMT2-232ENST00000557487 Q6ZRP5 223 aa10.69□□□□□ -0.7
SHMT2-232ENST00000557487 NKAPP1Q8N9T2 125 aa10.69□□□□□ -0.7
SHMT2-232ENST00000557487 DHRS4-AS1Q9P1J3 65 aa10.69□□□□□ -0.7
SHMT2-232ENST00000557487 PLA2G2DQ9UNK4 145 aa10.69□□□□□ -0.7
SHMT2-232ENST00000557487 TLX1NBP0CAT3 122 aa10.66□□□□□ -0.7
SHMT2-232ENST00000557487 MRAPQ8TCY5 172 aa10.66□□□□□ -0.7
SHMT2-232ENST00000557487 OCR1Q9BZK8 76 aa10.66□□□□□ -0.7
SHMT2-232ENST00000557487 FUSP35637 526 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHMT2-232ENST00000557487 Q8N377 158 aa10.64□□□□□ -0.71
SHMT2-232ENST00000557487 TRRAPQ9Y4A5 3859 aa10.64□□□□□ -0.71
SHMT2-232ENST00000557487 A0A0U1RQV1 116 aa10.64□□□□□ -0.71
SHMT2-232ENST00000557487 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
SHMT2-232ENST00000557487 PRYO14603 147 aa10.63□□□□□ -0.71
SHMT2-232ENST00000557487 ESRGQ1W209 222 aa10.63□□□□□ -0.71
SHMT2-232ENST00000557487 C7orf33Q8WU49 177 aa10.63□□□□□ -0.71
SHMT2-232ENST00000557487 IGKV2D-24A0A075B6R9 120 aa10.62□□□□□ -0.71
SHMT2-232ENST00000557487 Q6ZRX8 168 aa10.61□□□□□ -0.71
SHMT2-232ENST00000557487 NBEAL2Q6ZNJ1 2754 aa10.61□□□□□ -0.71
SHMT2-232ENST00000557487 Q6ZTC4 211 aa10.6□□□□□ -0.71
SHMT2-232ENST00000557487 Q8N9L7 120 aa10.59□□□□□ -0.71
SHMT2-232ENST00000557487 C3orf84H3BNL1 204 aa10.58□□□□□ -0.72
SHMT2-232ENST00000557487 SPRR1AP35321 89 aa10.58□□□□□ -0.72
SHMT2-232ENST00000557487 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
SHMT2-232ENST00000557487 FP248Q71RG6 208 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-232ENST00000557487 DNAH10OSP0CZ25 163 aa10.58□□□□□ -0.72
SHMT2-232ENST00000557487 TNP2Q05952 138 aa10.58□□□□□ -0.72
SHMT2-232ENST00000557487 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
SHMT2-232ENST00000557487 FBN3Q75N90 2809 aa10.58□□□□□ -0.72
SHMT2-232ENST00000557487 KRTAP4-16G5E9R7 235 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-232ENST00000557487 PRO0628Q9UI54 55 aa10.57□□□□□ -0.72
SHMT2-232ENST00000557487 Q8NBF4 154 aa10.56□□□□□ -0.72
SHMT2-232ENST00000557487 MGAM2Q2M2H8 2515 aa10.56□□□□□ -0.72
SHMT2-232ENST00000557487 IGLV1-50A0A075B6I6 118 aa10.56□□□□□ -0.72
SHMT2-232ENST00000557487 ETDCA0A1B0GVM5 59 aa10.56□□□□□ -0.72
SHMT2-232ENST00000557487 LCE6AA0A183 80 aa10.55□□□□□ -0.72
SHMT2-232ENST00000557487 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
SHMT2-232ENST00000557487 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
SHMT2-232ENST00000557487 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
SHMT2-232ENST00000557487 VWFP04275 2813 aa10.54□□□□□ -0.72
SHMT2-232ENST00000557487 A0A1W2PNM2 257 aa10.54□□□□□ -0.72
SHMT2-232ENST00000557487 OXLD1Q5BKU9 147 aa10.54□□□□□ -0.72
SHMT2-232ENST00000557487 PKD1L1Q8TDX9 2849 aa10.53□□□□□ -0.72
SHMT2-232ENST00000557487 DEFB131BA0A096LNP1 70 aa10.53□□□□□ -0.72
SHMT2-232ENST00000557487 RETNQ9HD89 108 aa10.53□□□□□ -0.72
SHMT2-232ENST00000557487 Q9BRP9 147 aa10.52□□□□□ -0.72
SHMT2-232ENST00000557487 LINC00336Q6ZUF6 198 aa10.5□□□□□ -0.73
SHMT2-232ENST00000557487 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
SHMT2-232ENST00000557487 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
SHMT2-232ENST00000557487 HIGD2AQ9BW72 106 aa10.48□□□□□ -0.73
SHMT2-232ENST00000557487 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
SHMT2-232ENST00000557487 RPL37AP8A6NKH3 93 aa10.46□□□□□ -0.73
SHMT2-232ENST00000557487 MRPL55Q7Z7F7 128 aaKnown RBP10.46□□□□□ -0.73
SHMT2-232ENST00000557487 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.73
SHMT2-232ENST00000557487 KRTAP10-11P60412 298 aa10.46□□□□□ -0.74
SHMT2-232ENST00000557487 FAM30AQ9NZY2 134 aa10.45□□□□□ -0.74
SHMT2-232ENST00000557487 DSCR10P59022 87 aa10.44□□□□□ -0.74
SHMT2-232ENST00000557487 ST20-AS1Q8NBB2 130 aa10.43□□□□□ -0.74
SHMT2-232ENST00000557487 ZCCHC13Q8WW36 166 aaKnown RBP10.43□□□□□ -0.74
SHMT2-232ENST00000557487 FAM168BA1KXE4 195 aa10.42□□□□□ -0.74
SHMT2-232ENST00000557487 UBE2BP63146 152 aa10.42□□□□□ -0.74
SHMT2-232ENST00000557487 REG3GQ6UW15 175 aa10.41□□□□□ -0.74
SHMT2-232ENST00000557487 PRB2P02812 416 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-232ENST00000557487 KRTAP7-1Q8IUC3 87 aa10.41□□□□□ -0.74
SHMT2-232ENST00000557487 HCG22E2RYF7 251 aa10.39□□□□□ -0.75
SHMT2-232ENST00000557487 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
SHMT2-232ENST00000557487 K7EIL1 84 aa10.39□□□□□ -0.75
SHMT2-232ENST00000557487 FAM229BQ4G0N7 80 aa10.39□□□□□ -0.75
SHMT2-232ENST00000557487 LINC00588Q9Y4M8 146 aa10.39□□□□□ -0.75
SHMT2-232ENST00000557487 MEGF8Q7Z7M0 2845 aa10.38□□□□□ -0.75
SHMT2-232ENST00000557487 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
SHMT2-232ENST00000557487 hDV103S1A0JD37 113 aa10.38□□□□□ -0.75
SHMT2-232ENST00000557487 K7EQZ3 153 aa10.38□□□□□ -0.75
SHMT2-232ENST00000557487 LINC00476Q8WZB0 136 aa10.37□□□□□ -0.75
SHMT2-232ENST00000557487 DNAH3Q8TD57 4116 aa10.37□□□□□ -0.75
SHMT2-232ENST00000557487 NDUFB1O75438 58 aa10.37□□□□□ -0.75
SHMT2-232ENST00000557487 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
SHMT2-232ENST00000557487 MPLKIPQ8TAP9 179 aa10.34□□□□□ -0.75
SHMT2-232ENST00000557487 PSCAO43653 123 aa10.33□□□□□ -0.76
SHMT2-232ENST00000557487 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
SHMT2-232ENST00000557487 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-232ENST00000557487 IGFL1Q6UW32 110 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms