RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
ACTN1-221ENST00000556571 SPRR4Q96PI1 79 aa6.7□□□□□ -1.34
ACTN1-221ENST00000556571 ATOH7Q8N100 152 aa6.69□□□□□ -1.34
ACTN1-221ENST00000556571 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
ACTN1-221ENST00000556571 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
ACTN1-221ENST00000556571 LOC107984156A0A0G2JMH3 177 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 PRYO14603 147 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 SPINK1P00995 79 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 NPC2P61916 151 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 S100A7L2Q5SY68 101 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 SCGB1D4Q6XE38 83 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 ARL17AQ8IVW1 177 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 Q8NBF4 154 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 HIST1H2BLQ99880 126 aa6.68□□□□□ -1.34
ACTN1-221ENST00000556571 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
ACTN1-221ENST00000556571 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
ACTN1-221ENST00000556571 ETDCA0A1B0GVM5 59 aa6.67□□□□□ -1.34
ACTN1-221ENST00000556571 HSBP1L1C9JCN9 74 aa6.67□□□□□ -1.34
ACTN1-221ENST00000556571 TIMM17BO60830 172 aa6.67□□□□□ -1.34
ACTN1-221ENST00000556571 NDUFC2O95298 119 aa6.67□□□□□ -1.34
ACTN1-221ENST00000556571 SNRPEP62304 92 aaKnown RBP6.67□□□□□ -1.34
ACTN1-221ENST00000556571 ADAMTSL4-AS1Q5T5F5 129 aa6.67□□□□□ -1.34
ACTN1-221ENST00000556571 TRBV10-3A0A0K0K1G6 114 aa6.66□□□□□ -1.34
ACTN1-221ENST00000556571 DDTP30046 118 aa6.66□□□□□ -1.34
ACTN1-221ENST00000556571 KCNQ1DNQ9H478 68 aa6.66□□□□□ -1.34
ACTN1-221ENST00000556571 COPS9Q8WXC6 57 aa6.65□□□□□ -1.34
ACTN1-221ENST00000556571 TTTY13Q9BZ97 58 aa6.65□□□□□ -1.34
ACTN1-221ENST00000556571 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
ACTN1-221ENST00000556571 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
ACTN1-221ENST00000556571 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
ACTN1-221ENST00000556571 SPANXCQ9NY87 97 aa6.64□□□□□ -1.35
ACTN1-221ENST00000556571 SOSTDC1Q6X4U4 206 aa6.63□□□□□ -1.35
ACTN1-221ENST00000556571 LITAFQ99732 161 aa6.63□□□□□ -1.35
ACTN1-221ENST00000556571 SCGB1D1O95968 90 aa6.62□□□□□ -1.35
ACTN1-221ENST00000556571 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
ACTN1-221ENST00000556571 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
ACTN1-221ENST00000556571 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
ACTN1-221ENST00000556571 TRAV23DV6A0A075B6W5 121 aa6.61□□□□□ -1.35
ACTN1-221ENST00000556571 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
ACTN1-221ENST00000556571 SPRR1AP35321 89 aa6.61□□□□□ -1.35
ACTN1-221ENST00000556571 HINT1P49773 126 aaPredicted RBP6.61□□□□□ -1.35
ACTN1-221ENST00000556571 XP32Q5T750 250 aa6.61□□□□□ -1.35
ACTN1-221ENST00000556571 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
ACTN1-221ENST00000556571 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-221ENST00000556571 JOSD1Q15040 202 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-221ENST00000556571 Q6ZVH6 145 aa6.6□□□□□ -1.35
ACTN1-221ENST00000556571 PCP2Q8IVA1 136 aa6.6□□□□□ -1.35
ACTN1-221ENST00000556571 LINC00518Q8N0U6 118 aa6.6□□□□□ -1.35
ACTN1-221ENST00000556571 Q8N377 158 aa6.6□□□□□ -1.35
ACTN1-221ENST00000556571 SPANXDQ9BXN6 97 aa6.6□□□□□ -1.35
ACTN1-221ENST00000556571 C5orf52A6NGY3 159 aa6.59□□□□□ -1.35
ACTN1-221ENST00000556571 SLC25A20O43772 301 aa6.59□□□□□ -1.35
ACTN1-221ENST00000556571 IFITM1P13164 125 aa6.59□□□□□ -1.35
ACTN1-221ENST00000556571 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
ACTN1-221ENST00000556571 SSBP3-AS1Q7Z2R9 100 aa6.59□□□□□ -1.35
ACTN1-221ENST00000556571 B5MCH6 92 aa6.58□□□□□ -1.36
ACTN1-221ENST00000556571 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
ACTN1-221ENST00000556571 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
ACTN1-221ENST00000556571 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
ACTN1-221ENST00000556571 GAGE2AQ6NT46 116 aa6.57□□□□□ -1.36
ACTN1-221ENST00000556571 Q6ZRX8 168 aa6.57□□□□□ -1.36
ACTN1-221ENST00000556571 IGLV9-49A0A0B4J1Y8 123 aa6.56□□□□□ -1.36
ACTN1-221ENST00000556571 MT1HP80294 61 aa6.56□□□□□ -1.36
ACTN1-221ENST00000556571 MOBPQ13875 183 aa6.56□□□□□ -1.36
ACTN1-221ENST00000556571 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
ACTN1-221ENST00000556571 A6NDN8 102 aa6.55□□□□□ -1.36
ACTN1-221ENST00000556571 MUSTN1Q8IVN3 82 aa6.55□□□□□ -1.36
ACTN1-221ENST00000556571 Q9BRP9 147 aa6.53□□□□□ -1.36
ACTN1-221ENST00000556571 TRAV13-2A0A0B4J235 113 aa6.52□□□□□ -1.37
ACTN1-221ENST00000556571 ERC2-IT1O76042 136 aa6.52□□□□□ -1.37
ACTN1-221ENST00000556571 DHRS4-AS1Q9P1J3 65 aa6.52□□□□□ -1.37
ACTN1-221ENST00000556571 COX7BP24311 80 aa6.51□□□□□ -1.37
ACTN1-221ENST00000556571 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
ACTN1-221ENST00000556571 VAMP8Q9BV40 100 aa6.51□□□□□ -1.37
ACTN1-221ENST00000556571 IGLV8-61A0A075B6I0 122 aa6.5□□□□□ -1.37
ACTN1-221ENST00000556571 COX8AP10176 69 aa6.5□□□□□ -1.37
ACTN1-221ENST00000556571 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
ACTN1-221ENST00000556571 PCOTHQ58A44 107 aa6.5□□□□□ -1.37
ACTN1-221ENST00000556571 HIST1H4GQ99525 98 aa6.5□□□□□ -1.37
ACTN1-221ENST00000556571 PAM16Q9Y3D7 125 aa6.5□□□□□ -1.37
ACTN1-221ENST00000556571 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
ACTN1-221ENST00000556571 SPATA45Q537H7 98 aa6.49□□□□□ -1.37
ACTN1-221ENST00000556571 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
ACTN1-221ENST00000556571 ELOF1P60002 83 aaKnown RBP6.48□□□□□ -1.37
ACTN1-221ENST00000556571 TRBV7-6A0A0J9YX20 115 aa6.47□□□□□ -1.37
ACTN1-221ENST00000556571 A0A1B0GWB2 263 aa6.47□□□□□ -1.37
ACTN1-221ENST00000556571 A4D1N5 150 aa6.47□□□□□ -1.37
ACTN1-221ENST00000556571 DLEU1O43261 78 aa6.47□□□□□ -1.37
ACTN1-221ENST00000556571 C9orf153Q5TBE3 101 aa6.47□□□□□ -1.37
ACTN1-221ENST00000556571 SLC25A34Q6PIV7 304 aa6.47□□□□□ -1.37
ACTN1-221ENST00000556571 C14orf144Q96I85 54 aa6.47□□□□□ -1.37
ACTN1-221ENST00000556571 VAMP3Q15836 100 aa6.46□□□□□ -1.38
ACTN1-221ENST00000556571 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
ACTN1-221ENST00000556571 SMIM11BQ8TCY0 68 aa6.45□□□□□ -1.38
ACTN1-221ENST00000556571 NHP2Q9NX24 153 aaKnown RBP6.45□□□□□ -1.38
ACTN1-221ENST00000556571 M0R2T5 61 aa6.44□□□□□ -1.38
ACTN1-221ENST00000556571 TAL2Q16559 108 aa6.44□□□□□ -1.38
ACTN1-221ENST00000556571 C12orf57Q99622 126 aa6.44□□□□□ -1.38
ACTN1-221ENST00000556571 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
ACTN1-221ENST00000556571 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms