RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 VPREB1P12018 145 aa6.5□□□□□ -1.37
SRP54-208ENST00000555557 LINC00336Q6ZUF6 198 aa6.5□□□□□ -1.37
SRP54-208ENST00000555557 A0A0B4J2C4 111 aa6.5□□□□□ -1.37
SRP54-208ENST00000555557 NDUFC2O95298 119 aa6.5□□□□□ -1.37
SRP54-208ENST00000555557 FAM19A5Q7Z5A7 132 aaPredicted RBP6.5□□□□□ -1.37
SRP54-208ENST00000555557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
SRP54-208ENST00000555557 A0A1W2PNN7 141 aa6.49□□□□□ -1.37
SRP54-208ENST00000555557 OR13C6PQ8NH95 151 aa6.49□□□□□ -1.37
SRP54-208ENST00000555557 DPH3Q96FX2 82 aa6.49□□□□□ -1.37
SRP54-208ENST00000555557 TRBV10-2A0A0K0K1G8 114 aa6.48□□□□□ -1.37
SRP54-208ENST00000555557 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
SRP54-208ENST00000555557 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.37
SRP54-208ENST00000555557 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.37
SRP54-208ENST00000555557 SPACA4Q8TDM5 124 aa6.46□□□□□ -1.37
SRP54-208ENST00000555557 PLA2G2DQ9UNK4 145 aa6.46□□□□□ -1.37
SRP54-208ENST00000555557 C22orf24Q9Y442 160 aa6.46□□□□□ -1.37
SRP54-208ENST00000555557 FAM240AA0A1B0GVK7 77 aa6.46□□□□□ -1.38
SRP54-208ENST00000555557 A0A1B0GVY2 172 aa6.46□□□□□ -1.38
SRP54-208ENST00000555557 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
SRP54-208ENST00000555557 Q1RN00 199 aa6.46□□□□□ -1.38
SRP54-208ENST00000555557 S100A7L2Q5SY68 101 aa6.46□□□□□ -1.38
SRP54-208ENST00000555557 FAM30AQ9NZY2 134 aa6.46□□□□□ -1.38
SRP54-208ENST00000555557 PKIGQ9Y2B9 76 aa6.46□□□□□ -1.38
SRP54-208ENST00000555557 TRBV10-3A0A0K0K1G6 114 aa6.45□□□□□ -1.38
SRP54-208ENST00000555557 M0R378 163 aa6.45□□□□□ -1.38
SRP54-208ENST00000555557 C7orf33Q8WU49 177 aa6.45□□□□□ -1.38
SRP54-208ENST00000555557 LINC00474Q9P2X8 69 aa6.45□□□□□ -1.38
SRP54-208ENST00000555557 TRBV7-7A0A0K0K1E9 115 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 RPL37AP8A6NKH3 93 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 H3BT86 120 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 IGLV5-37A0A075B6J1 123 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 A0A087WYN8 130 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 IGLV6-57P01721 117 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
SRP54-208ENST00000555557 SMIM11BQ8TCY0 68 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 LINC00167Q96N53 147 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
SRP54-208ENST00000555557 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
SRP54-208ENST00000555557 PHF5AQ7RTV0 110 aaKnown RBP6.43□□□□□ -1.38
SRP54-208ENST00000555557 ACYP1P07311 99 aa6.42□□□□□ -1.38
SRP54-208ENST00000555557 HAMPP81172 84 aa6.42□□□□□ -1.38
SRP54-208ENST00000555557 C5orf47Q569G3 176 aa6.42□□□□□ -1.38
SRP54-208ENST00000555557 COX6CP09669 75 aa6.42□□□□□ -1.38
SRP54-208ENST00000555557 TRIAP1O43715 76 aa6.41□□□□□ -1.38
SRP54-208ENST00000555557 DYNC1H1Q14204 4646 aaKnown RBP6.41□□□□□ -1.38
SRP54-208ENST00000555557 IGLV1-50A0A075B6I6 118 aa6.4□□□□□ -1.38
SRP54-208ENST00000555557 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.38
SRP54-208ENST00000555557 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.39
SRP54-208ENST00000555557 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.39
SRP54-208ENST00000555557 C3orf22Q8N5N4 141 aa6.4□□□□□ -1.39
SRP54-208ENST00000555557 PLAC8Q9NZF1 115 aa6.4□□□□□ -1.39
SRP54-208ENST00000555557 C6orf99Q4VX62 202 aa6.39□□□□□ -1.39
SRP54-208ENST00000555557 C9orf153Q5TBE3 101 aa6.39□□□□□ -1.39
SRP54-208ENST00000555557 Q6ZSA8 131 aa6.39□□□□□ -1.39
SRP54-208ENST00000555557 CIRBP-AS1Q8TBR5 109 aa6.39□□□□□ -1.39
SRP54-208ENST00000555557 HERC2O95714 4834 aa6.39□□□□□ -1.39
SRP54-208ENST00000555557 EPM2AB3EWF7 344 aa6.38□□□□□ -1.39
SRP54-208ENST00000555557 UBE2BP63146 152 aa6.38□□□□□ -1.39
SRP54-208ENST00000555557 KCNQ1DNQ9H478 68 aa6.38□□□□□ -1.39
SRP54-208ENST00000555557 A0A1B0GX51 115 aa6.38□□□□□ -1.39
SRP54-208ENST00000555557 UQCRQO14949 82 aa6.38□□□□□ -1.39
SRP54-208ENST00000555557 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
SRP54-208ENST00000555557 SCXQ7RTU7 201 aa6.38□□□□□ -1.39
SRP54-208ENST00000555557 J3KT08 172 aa6.37□□□□□ -1.39
SRP54-208ENST00000555557 CLEC2BQ92478 149 aa6.37□□□□□ -1.39
SRP54-208ENST00000555557 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
SRP54-208ENST00000555557 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
SRP54-208ENST00000555557 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
SRP54-208ENST00000555557 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
SRP54-208ENST00000555557 LST1O00453 97 aa6.36□□□□□ -1.39
SRP54-208ENST00000555557 LINC00643Q86TS7 51 aa6.36□□□□□ -1.39
SRP54-208ENST00000555557 DIRC1Q969H9 104 aa6.36□□□□□ -1.39
SRP54-208ENST00000555557 FAM218AQ96MZ4 157 aa6.35□□□□□ -1.39
SRP54-208ENST00000555557 PRYO14603 147 aa6.35□□□□□ -1.39
SRP54-208ENST00000555557 REG3GQ6UW15 175 aa6.35□□□□□ -1.39
SRP54-208ENST00000555557 SPRR1AP35321 89 aa6.34□□□□□ -1.39
SRP54-208ENST00000555557 APOBP04114 4563 aaKnown RBP6.33□□□□□ -1.4
SRP54-208ENST00000555557 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
SRP54-208ENST00000555557 COX7CP15954 63 aa6.33□□□□□ -1.4
SRP54-208ENST00000555557 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
SRP54-208ENST00000555557 H0YGX0 51 aa6.32□□□□□ -1.4
SRP54-208ENST00000555557 CRYGAP11844 174 aa6.32□□□□□ -1.4
SRP54-208ENST00000555557 COX7BP24311 80 aa6.32□□□□□ -1.4
SRP54-208ENST00000555557 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
SRP54-208ENST00000555557 GAGE2AQ6NT46 116 aa6.32□□□□□ -1.4
SRP54-208ENST00000555557 FAM19A1Q7Z5A9 133 aa6.31□□□□□ -1.4
SRP54-208ENST00000555557 PSORS1C2Q9UIG4 136 aa6.31□□□□□ -1.4
SRP54-208ENST00000555557 PRLHP81277 87 aa6.31□□□□□ -1.4
SRP54-208ENST00000555557 TRBV7-6A0A0J9YX20 115 aa6.3□□□□□ -1.4
SRP54-208ENST00000555557 ATOX1O00244 68 aa6.3□□□□□ -1.4
SRP54-208ENST00000555557 LINC00575Q6W349 94 aa6.3□□□□□ -1.4
SRP54-208ENST00000555557 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
SRP54-208ENST00000555557 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
SRP54-208ENST00000555557 Q6ZRX8 168 aa6.29□□□□□ -1.4
SRP54-208ENST00000555557 Q9BRP9 147 aa6.29□□□□□ -1.4
SRP54-208ENST00000555557 BCE1O60756 84 aa6.29□□□□□ -1.4
SRP54-208ENST00000555557 TRACP01848 142 aa6.29□□□□□ -1.4
SRP54-208ENST00000555557 SMR3BP02814 79 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms