RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-205ENST00000555227 SAA2P0DJI9 122 aaPredicted RBP0.66□□□□□ -2.3
LINC01578-205ENST00000555227 LINC00694P0DN24 101 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 IGHV3-30-5P0DP03 117 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 ATP5EP56381 51 aaPredicted RBP0.66□□□□□ -2.3
LINC01578-205ENST00000555227 BLCAPP62952 87 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 RHOHQ15669 191 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 RPL39P5Q59GN2 51 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 CFAP126Q5VTH2 177 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 CRYBG3Q68DQ2 2970 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 NDUFA11Q86Y39 141 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 SERP2Q8N6R1 65 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 BRK1Q8WUW1 75 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 PLAC4Q8WY50 150 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 LEAP2Q969E1 77 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 USMG5Q96IX5 58 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 FAM167A-AS1Q96KT0 104 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 SMIM2Q9BVW6 85 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 C10orf95Q9H7T3 257 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 MRPL35Q9NZE8 188 aaKnown RBP0.66□□□□□ -2.3
LINC01578-205ENST00000555227 CEP290O15078 2479 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 CADP27708 2225 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 APCP25054 2843 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 MAP1AP78559 2803 aaPredicted RBP0.66□□□□□ -2.3
LINC01578-205ENST00000555227 SZT2Q5T011 3432 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 EYSQ5T1H1 3165 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 CACNA1EQ15878 2313 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 DCHS1Q96JQ0 3298 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 TNS1Q9HBL0 1735 aaKnown RBP0.66□□□□□ -2.3
LINC01578-205ENST00000555227 CFAP47Q6ZTR5 3102 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 ABCA4P78363 2273 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 PKDREJQ9NTG1 2253 aa0.66□□□□□ -2.3
LINC01578-205ENST00000555227 SPTBN2O15020 2390 aa0.65□□□□□ -2.3
LINC01578-205ENST00000555227 SPTAN1Q13813 2472 aaKnown RBP0.65□□□□□ -2.3
LINC01578-205ENST00000555227 PCNX1Q96RV3 2341 aa0.65□□□□□ -2.3
LINC01578-205ENST00000555227 LOC400499M0QZD8 3231 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 ADGRG4Q8IZF6 3080 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 COL12A1Q99715 3063 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 TRAV12-2A0A075B6T6 113 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 TRAV12-3A0A0B4J271 114 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 TRBV7-6A0A0J9YX20 115 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 TRBV7-7A0A0K0K1E9 115 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 TRBV10-3A0A0K0K1G6 114 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 LOC107984640A0A0U1RRK4 108 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 TEX49A0A1B0GTD5 131 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 FAM236AA0A1B0GUQ0 79 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 FAM236BA0A1B0GV22 79 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 LINC01546A6NGU7 62 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 FAM223BA6NKX1 122 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 K7EIM0 57 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 M0R1W7 72 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 NDUFB1O75438 58 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 MT-ATP8P03928 68 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 APELAP0DMC3 54 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 CCL4P13236 92 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 HTN1P15515 57 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 CCL3L1P16619 93 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 UBE2D1P51668 147 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 LINC00158P58513 81 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 UBE2D3P61077 147 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 UBE2D2P62837 147 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 HAMPP81172 84 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 RBM3P98179 157 aaKnown RBP0.65□□□□□ -2.31
LINC01578-205ENST00000555227 WT1-ASQ06250 92 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 MINOS1Q5TGZ0 78 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 FAM74A4Q5TZK3 123 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 ATP5EP2Q5VTU8 51 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 CSAG1Q6PB30 78 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 MUSTN1Q8IVN3 82 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 FAM223AQ8IWN6 122 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 DPH3Q96FX2 82 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 CNFNQ9BYD5 112 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 AGPAT4-IT1Q9H0P7 198 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 PROK2Q9HC23 129 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 MRPL36Q9P0J6 103 aaKnown RBP0.65□□□□□ -2.31
LINC01578-205ENST00000555227 KAAG1Q9UBP8 84 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 NDUFA12Q9UI09 145 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 AKAP13Q12802 2813 aa0.65□□□□□ -2.31
LINC01578-205ENST00000555227 SPTBN5Q9NRC6 3674 aaKnown RBP0.65□□□□□ -2.31
LINC01578-205ENST00000555227 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.316e-19■■■■■ 46.1
LINC01578-205ENST00000555227 MED13LQ71F56 2210 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 PLCE1Q9P212 2302 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 NCOR1O75376 2440 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 SPTA1P02549 2419 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 TRBV7-3A0A075B6L6 115 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 IGIPA6NJ69 53 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 CCDC179H3BU77 68 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 H3BUA1 57 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 I3L2K1 104 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 NDUFA4O00483 81 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 CCKP06307 115 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 CRIP1P50238 77 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 COX17Q14061 63 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 NREPQ16612 68 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 DEFB109BQ30KR1 87 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 DEFB121Q5J5C9 76 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 TMEM263Q8WUH6 116 aaKnown RBP0.64□□□□□ -2.31
LINC01578-205ENST00000555227 LINC01600Q96MT4 127 aa0.64□□□□□ -2.31
LINC01578-205ENST00000555227 GAFA1Q96PS6 74 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms