RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 RNASE3P12724 160 aaKnown RBP1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 CRIP1P50238 77 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 RHEBQ15382 184 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 ADIRFQ15847 76 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 ZNF56Q15929 161 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 FAM74A4Q5TZK3 123 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 LYPD5Q6UWN5 251 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 UNQ6190/PRO20217Q6UXQ8 127 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 SEC11CQ9BY50 192 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 CNFNQ9BYD5 112 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 TMEM191AQ9H0A3 160 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 ST20Q9HBF5 79 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 SRRM2Q9UQ35 2752 aaKnown RBP1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 LYSTQ99698 3801 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 A0A096LPF7 62 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 TRBV6-8A0A0A6YYG3 113 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 IGHV1-24A0A0C4DH33 117 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 IGKV3D-7A0A0C4DH55 119 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 IGKV3OR2-268A0A0C4DH90 116 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 FAM236DA0A1B0GTK5 79 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 I3L3M4 83 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 MT-ND6P03923 174 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 IGLC6P0CF74 106 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 FAM236CP0DP71 79 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 ZNF25P17030 456 aaPredicted RBP1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 FCER1GP30273 86 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 CKS2P33552 79 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 ESRGQ1W209 222 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 LINC01556Q5JQF7 62 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 SVBPQ8N300 66 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 C20orf78Q9BR46 151 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 CSMD3Q7Z407 3707 aa1.77□□□□□ -2.13
CKS1BP1-201ENST00000555221 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 SMIM27A0A1W2PRY6 76 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 M0QY20 66 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 MGPP08493 103 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 SFTA3P0C7M3 94 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 UBE2D3P61077 147 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 UBE2D2P62837 147 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 SEC11AP67812 179 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 HBBP68871 147 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 IQCJQ1A5X6 159 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 NUP35Q8NFH5 326 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 OR10AG1Q8NH19 301 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 RNASE7Q9H1E1 156 aaKnown RBP1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 NXT2Q9NPJ8 142 aaKnown RBP1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 KMT2AQ03164 3969 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
CKS1BP1-201ENST00000555221 TRBV27A0A0K0K1C4 114 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 C1orf196B1AJZ1 125 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 M0R2N4 97 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 TCL1BO95988 128 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 HIST3H2BBQ8N257 126 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 OR5A1Q8NGJ0 315 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 LINC00474Q9P2X8 69 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 V9GYV3 84 aa1.75□□□□□ -2.13
CKS1BP1-201ENST00000555221 NEBP20929 6669 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 C7orf77A4D0Y5 90 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 AKR1D1P51857 326 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 POLR2KP53803 58 aaKnown RBP1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 Q6ZQT0 140 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 DPH3Q96FX2 82 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 PRELID3AQ96N28 172 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 C2orf88Q9BSF0 95 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 SMCO4Q9NRQ5 59 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 SPANXA1Q9NS26 97 aa1.74□□□□□ -2.13
CKS1BP1-201ENST00000555221 DNAH9Q9NYC9 4486 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 LINC00587B1AMM8 73 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 IGHV3-30P01768 117 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 IGHV3-33P01772 117 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 APOC3P02656 99 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 LINC00694P0DN24 101 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 IGHV3-30-5P0DP03 117 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 PRB4P10163 310 aaPredicted RBP1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 IFI27P40305 119 aaPredicted RBP1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 MRPS36P82909 103 aaKnown RBP1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 SFTA2Q6UW10 78 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 Q8N8P6 123 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 TMEM141Q96I45 108 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 TMEM70Q9BUB7 260 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 CYSLTR1Q9Y271 337 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 DNAH7Q8WXX0 4024 aa1.73□□□□□ -2.13
CKS1BP1-201ENST00000555221 PKHD1P08F94 4074 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 D6R8Y8 96 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 S100A1P23297 94 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 MRPL54Q6P161 138 aaKnown RBP1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 WFDC10BQ8IUB3 73 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 LINC00269Q8N2A0 174 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 RETNLBQ9BQ08 111 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 SMIM2Q9BVW6 85 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 DNAH10Q8IVF4 4471 aa1.72□□□□□ -2.13
CKS1BP1-201ENST00000555221 HUWE1Q7Z6Z7 4374 aaKnown RBP1.71□□□□□ -2.14
CKS1BP1-201ENST00000555221 A0A087WTM6 91 aa1.71□□□□□ -2.14
CKS1BP1-201ENST00000555221 IGHV1-58A0A0C4DH39 117 aa1.71□□□□□ -2.14
CKS1BP1-201ENST00000555221 H3BRM9 83 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms