RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CRYGAP11844 174 aa10.29□□□□□ -0.76
ARHGEF40-203ENST00000554514 LINC01547P58512 204 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF40-203ENST00000554514 SERTAD4-AS1Q5TG53 156 aa10.29□□□□□ -0.76
ARHGEF40-203ENST00000554514 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
ARHGEF40-203ENST00000554514 V9GYY9 64 aa10.28□□□□□ -0.76
ARHGEF40-203ENST00000554514 COL6A5A8TX70 2615 aa10.28□□□□□ -0.76
ARHGEF40-203ENST00000554514 RPL37AP8A6NKH3 93 aa10.27□□□□□ -0.77
ARHGEF40-203ENST00000554514 LINC00528Q8N1L1 170 aa10.27□□□□□ -0.77
ARHGEF40-203ENST00000554514 PRO0628Q9UI54 55 aa10.27□□□□□ -0.77
ARHGEF40-203ENST00000554514 OXTP01178 125 aa10.26□□□□□ -0.77
ARHGEF40-203ENST00000554514 Q5XG85 94 aa10.26□□□□□ -0.77
ARHGEF40-203ENST00000554514 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
ARHGEF40-203ENST00000554514 FAM168BA1KXE4 195 aa10.25□□□□□ -0.77
ARHGEF40-203ENST00000554514 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
ARHGEF40-203ENST00000554514 C7orf33Q8WU49 177 aa10.24□□□□□ -0.77
ARHGEF40-203ENST00000554514 LINC00588Q9Y4M8 146 aa10.24□□□□□ -0.77
ARHGEF40-203ENST00000554514 TRBV7-4A0A0J9YYF1 115 aa10.24□□□□□ -0.77
ARHGEF40-203ENST00000554514 TRBV7-6A0A0J9YX20 115 aa10.23□□□□□ -0.77
ARHGEF40-203ENST00000554514 PDE6GP18545 87 aa10.23□□□□□ -0.77
ARHGEF40-203ENST00000554514 LINC00336Q6ZUF6 198 aa10.23□□□□□ -0.77
ARHGEF40-203ENST00000554514 BAHCC1Q9P281 2608 aa10.23□□□□□ -0.77
ARHGEF40-203ENST00000554514 H3BQ85 93 aa10.23□□□□□ -0.77
ARHGEF40-203ENST00000554514 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
ARHGEF40-203ENST00000554514 FAM236DA0A1B0GTK5 79 aa10.21□□□□□ -0.77
ARHGEF40-203ENST00000554514 FAM236CP0DP71 79 aa10.21□□□□□ -0.77
ARHGEF40-203ENST00000554514 TRAV10A0A0B4J240 114 aa10.2□□□□□ -0.78
ARHGEF40-203ENST00000554514 C20orf197Q8N268 126 aa10.2□□□□□ -0.78
ARHGEF40-203ENST00000554514 C3orf84H3BNL1 204 aa10.19□□□□□ -0.78
ARHGEF40-203ENST00000554514 Q8N9L7 120 aa10.18□□□□□ -0.78
ARHGEF40-203ENST00000554514 DNAH3Q8TD57 4116 aa10.18□□□□□ -0.78
ARHGEF40-203ENST00000554514 A0A0U1RQV1 116 aa10.18□□□□□ -0.78
ARHGEF40-203ENST00000554514 KCNQ1DNQ9H478 68 aa10.17□□□□□ -0.78
ARHGEF40-203ENST00000554514 MGAM2Q2M2H8 2515 aa10.15□□□□□ -0.78
ARHGEF40-203ENST00000554514 CXCL6P80162 114 aa10.15□□□□□ -0.78
ARHGEF40-203ENST00000554514 Q8N377 158 aa10.15□□□□□ -0.78
ARHGEF40-203ENST00000554514 ETDCA0A1B0GVM5 59 aa10.14□□□□□ -0.79
ARHGEF40-203ENST00000554514 ST20-AS1Q8NBB2 130 aa10.14□□□□□ -0.79
ARHGEF40-203ENST00000554514 LYSTQ99698 3801 aa10.14□□□□□ -0.79
ARHGEF40-203ENST00000554514 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
ARHGEF40-203ENST00000554514 HUWE1Q7Z6Z7 4374 aaKnown RBP10.13□□□□□ -0.79
ARHGEF40-203ENST00000554514 TMEM258P61165 79 aa10.13□□□□□ -0.79
ARHGEF40-203ENST00000554514 Q9BRP9 147 aa10.13□□□□□ -0.79
ARHGEF40-203ENST00000554514 K7EIL1 84 aa10.12□□□□□ -0.79
ARHGEF40-203ENST00000554514 NREPQ16612 68 aa10.12□□□□□ -0.79
ARHGEF40-203ENST00000554514 KRTAP7-1Q8IUC3 87 aa10.12□□□□□ -0.79
ARHGEF40-203ENST00000554514 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
ARHGEF40-203ENST00000554514 Q6ZRX8 168 aa10.11□□□□□ -0.79
ARHGEF40-203ENST00000554514 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
ARHGEF40-203ENST00000554514 TLX1NBP0CAT3 122 aa10.1□□□□□ -0.79
ARHGEF40-203ENST00000554514 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
ARHGEF40-203ENST00000554514 BPY2O14599 106 aa10.09□□□□□ -0.79
ARHGEF40-203ENST00000554514 UBE2BP63146 152 aa10.09□□□□□ -0.79
ARHGEF40-203ENST00000554514 TM2D3Q9BRN9 247 aa10.09□□□□□ -0.79
ARHGEF40-203ENST00000554514 DNAH1Q9P2D7 4330 aa10.09□□□□□ -0.79
ARHGEF40-203ENST00000554514 RMI2Q96E14 147 aa10.09□□□□□ -0.79
ARHGEF40-203ENST00000554514 DNAH10Q8IVF4 4471 aa10.08□□□□□ -0.8
ARHGEF40-203ENST00000554514 IGKV2-24A0A0C4DH68 120 aa10.08□□□□□ -0.8
ARHGEF40-203ENST00000554514 ERC2-IT1O76042 136 aa10.08□□□□□ -0.8
ARHGEF40-203ENST00000554514 MRPL55Q7Z7F7 128 aaKnown RBP10.08□□□□□ -0.8
ARHGEF40-203ENST00000554514 DHRS4-AS1Q9P1J3 65 aa10.08□□□□□ -0.8
ARHGEF40-203ENST00000554514 STAB2Q8WWQ8 2551 aa10.07□□□□□ -0.8
ARHGEF40-203ENST00000554514 PRYO14603 147 aa10.06□□□□□ -0.8
ARHGEF40-203ENST00000554514 KRTAP4-16G5E9R7 235 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF40-203ENST00000554514 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
ARHGEF40-203ENST00000554514 CSMD3Q7Z407 3707 aa10.05□□□□□ -0.8
ARHGEF40-203ENST00000554514 BRK1Q8WUW1 75 aa10.04□□□□□ -0.8
ARHGEF40-203ENST00000554514 C1orf137Q5JT78 98 aa10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 KRTAP1-5Q9BYS1 174 aa10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 FUSP35637 526 aaKnown RBP eCLIP10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 A0A0G2JQZ4 141 aa10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 PSCAO43653 123 aa10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 IGKV4-1P06312 121 aa10.03□□□□□ -0.8
ARHGEF40-203ENST00000554514 IGLV5-48A0A075B6I7 105 aa10.02□□□□□ -0.81
ARHGEF40-203ENST00000554514 A0A1W2PNM2 257 aa10.02□□□□□ -0.81
ARHGEF40-203ENST00000554514 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
ARHGEF40-203ENST00000554514 SPRR1AP35321 89 aa10.01□□□□□ -0.81
ARHGEF40-203ENST00000554514 REG3GQ6UW15 175 aa10.01□□□□□ -0.81
ARHGEF40-203ENST00000554514 COL7A1Q02388 2944 aa10.01□□□□□ -0.81
ARHGEF40-203ENST00000554514 A0A096LNI7 61 aa10□□□□□ -0.81
ARHGEF40-203ENST00000554514 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
ARHGEF40-203ENST00000554514 TENM2Q9NT68 2774 aa10□□□□□ -0.81
ARHGEF40-203ENST00000554514 H7BZZ5 65 aa10□□□□□ -0.81
ARHGEF40-203ENST00000554514 PRLHP81277 87 aa10□□□□□ -0.81
ARHGEF40-203ENST00000554514 BCE1O60756 84 aa9.99□□□□□ -0.81
ARHGEF40-203ENST00000554514 F8WEM9 126 aa9.98□□□□□ -0.81
ARHGEF40-203ENST00000554514 DNAH9Q9NYC9 4486 aa9.97□□□□□ -0.81
ARHGEF40-203ENST00000554514 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.81
ARHGEF40-203ENST00000554514 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
ARHGEF40-203ENST00000554514 TNP2Q05952 138 aa9.95□□□□□ -0.82
ARHGEF40-203ENST00000554514 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
ARHGEF40-203ENST00000554514 Q8NBF4 154 aa9.95□□□□□ -0.82
ARHGEF40-203ENST00000554514 LINC00476Q8WZB0 136 aa9.92□□□□□ -0.82
ARHGEF40-203ENST00000554514 SRRM2Q9UQ35 2752 aaKnown RBP9.92□□□□□ -0.82
ARHGEF40-203ENST00000554514 DEFB116Q30KQ4 102 aa9.92□□□□□ -0.82
ARHGEF40-203ENST00000554514 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
ARHGEF40-203ENST00000554514 TMEM254Q8TBM7 123 aa9.92□□□□□ -0.82
ARHGEF40-203ENST00000554514 FAM30AQ9NZY2 134 aa9.92□□□□□ -0.82
ARHGEF40-203ENST00000554514 C16orf90A8MZG2 172 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms