RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 ANK2Q01484 3957 aa1.72□□□□□ -2.13
PRPF39-207ENST00000554439 ANGP03950 147 aaKnown RBP1.71□□□□□ -2.14
PRPF39-207ENST00000554439 SEC61GP60059 68 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 Q8N9L7 120 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 TM2D3Q9BRN9 247 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 TRAV7A0A075B6U4 112 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 NDUFC2-KCTD14E9PQ53 114 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.71□□□□□ -2.14
PRPF39-207ENST00000554439 FP248Q71RG6 208 aaPredicted RBP1.71□□□□□ -2.14
PRPF39-207ENST00000554439 SMIM29Q86T20 159 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 C16orf95Q9H693 158 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 XAGE1AQ9HD64 81 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 LOC110117498A0A087WWA1 95 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 TRBV10-3A0A0K0K1G6 114 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 A0A1B0GUV1 79 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 EPM2AB3EWF7 344 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 REG3AQ06141 175 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 FAM229BQ4G0N7 80 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 Q6ZRP5 223 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 SERP1Q9Y6X1 66 aa1.71□□□□□ -2.14
PRPF39-207ENST00000554439 UNC79Q9P2D8 2635 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 CSMD3Q7Z407 3707 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 CYSRT1A8MQ03 144 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 IGLV1-51P01701 117 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 IGLV6-57P01721 117 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 KLKP1Q107X0 134 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 COX17Q14061 63 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 MUC7Q8TAX7 377 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 UBR5O95071 2799 aaPredicted RBP1.7□□□□□ -2.14
PRPF39-207ENST00000554439 HIVEP1P15822 2718 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 ITPR2Q14571 2701 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 USP24Q9UPU5 2620 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 PDZD2O15018 2839 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 TRBV7-4A0A0J9YYF1 115 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 SPAG11BQ08648 103 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 PRO0255Q9UI72 69 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 PKIGQ9Y2B9 76 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 TENM1Q9UKZ4 2725 aa1.7□□□□□ -2.14
PRPF39-207ENST00000554439 TRBV7-6A0A0J9YX20 115 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 BPY2O14599 106 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 HTN3P15516 51 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 DEFB113Q30KQ7 82 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 F8P00451 2351 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 MIFP14174 115 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 DAD1P61803 113 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 CXCL6P80162 114 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 NREPQ16612 68 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 DEFB135Q30KP9 77 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 HIGD2BQ4VC39 106 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 C9orf66Q5T8R8 295 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 LINC00612Q8N6U2 182 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 C6orf48Q9UBA6 75 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 KLK12Q9UKR0 248 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 CELA1Q9UNI1 258 aa1.69□□□□□ -2.14
PRPF39-207ENST00000554439 A0A0U1RQV1 116 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 C3orf84H3BNL1 204 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 ZNF73O43830 326 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-207ENST00000554439 C11orf45Q8TAV5 145 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 TMEM254Q8TBM7 123 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 DIRC1Q969H9 104 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 PRO0628Q9UI54 55 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 TENM4Q6N022 2769 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 SMIM26A0A096LP01 95 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 IGKV4-1P06312 121 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 COX7BP24311 80 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 KRTAP10-3P60369 221 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 DEFB105AQ8NG35 78 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 MRAPQ8TCY5 172 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 BRK1Q8WUW1 75 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 HIGD2AQ9BW72 106 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 TEP1Q99973 2627 aaKnown RBP1.68□□□□□ -2.14
PRPF39-207ENST00000554439 A0A0J9YWU9 116 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 LRCOL1A6NCL2 159 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 BCE1O60756 84 aa1.68□□□□□ -2.14
PRPF39-207ENST00000554439 CMC4P56277 68 aaPredicted RBP1.68□□□□□ -2.14
PRPF39-207ENST00000554439 ELOF1P60002 83 aaKnown RBP1.68□□□□□ -2.14
PRPF39-207ENST00000554439 LYSTQ99698 3801 aa1.67□□□□□ -2.14
PRPF39-207ENST00000554439 PDE6GP18545 87 aa1.67□□□□□ -2.14
PRPF39-207ENST00000554439 OTOGQ6ZRI0 2925 aa1.67□□□□□ -2.14
PRPF39-207ENST00000554439 ATRQ13535 2644 aa1.67□□□□□ -2.14
PRPF39-207ENST00000554439 A0A087X002 238 aa1.67□□□□□ -2.14
PRPF39-207ENST00000554439 Q6ZRU5 148 aa1.67□□□□□ -2.14
PRPF39-207ENST00000554439 OCR1Q9BZK8 76 aa1.67□□□□□ -2.14
PRPF39-207ENST00000554439 BAHCC1Q9P281 2608 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 NDUFC1O43677 76 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 Q6ZTC4 211 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 CAMK2N2Q96S95 79 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 SMR3AQ99954 134 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 PRR34Q9NV39 138 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 NOTCH2Q04721 2471 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 TENM3Q9P273 2699 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 GVQW2A0A096LPI5 108 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-207ENST00000554439 LYRM9A8MSI8 78 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 PRB2P02812 416 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-207ENST00000554439 FUSP35637 526 aaKnown RBP eCLIP1.66□□□□□ -2.14
PRPF39-207ENST00000554439 LELP1Q5T871 98 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 NOTCH2NLQ7Z3S9 236 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 WFDC10BQ8IUB3 73 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 Q8N377 158 aa1.66□□□□□ -2.14
PRPF39-207ENST00000554439 Q8NAQ8 132 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms