RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
ACTN1-211ENST00000553882 C4orf48Q5BLP8 95 aa9.53□□□□□ -0.88
ACTN1-211ENST00000553882 PDE6GP18545 87 aa9.53□□□□□ -0.88
ACTN1-211ENST00000553882 H3BQ85 93 aa9.52□□□□□ -0.88
ACTN1-211ENST00000553882 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.88
ACTN1-211ENST00000553882 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.88
ACTN1-211ENST00000553882 CASC10Q5T4H9 136 aa9.52□□□□□ -0.89
ACTN1-211ENST00000553882 LYSTQ99698 3801 aa9.51□□□□□ -0.89
ACTN1-211ENST00000553882 LOC107984640A0A0U1RRK4 108 aa9.51□□□□□ -0.89
ACTN1-211ENST00000553882 DEFB105AQ8NG35 78 aa9.51□□□□□ -0.89
ACTN1-211ENST00000553882 DNAH10OSP0CZ25 163 aa9.5□□□□□ -0.89
ACTN1-211ENST00000553882 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
ACTN1-211ENST00000553882 C7orf33Q8WU49 177 aa9.5□□□□□ -0.89
ACTN1-211ENST00000553882 FAM168BA1KXE4 195 aa9.49□□□□□ -0.89
ACTN1-211ENST00000553882 LINC00588Q9Y4M8 146 aa9.49□□□□□ -0.89
ACTN1-211ENST00000553882 MGAM2Q2M2H8 2515 aa9.48□□□□□ -0.89
ACTN1-211ENST00000553882 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
ACTN1-211ENST00000553882 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
ACTN1-211ENST00000553882 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
ACTN1-211ENST00000553882 CXCL6P80162 114 aa9.45□□□□□ -0.9
ACTN1-211ENST00000553882 FAM19A5Q7Z5A7 132 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-211ENST00000553882 STAB2Q8WWQ8 2551 aa9.44□□□□□ -0.9
ACTN1-211ENST00000553882 TMEM258P61165 79 aa9.44□□□□□ -0.9
ACTN1-211ENST00000553882 C3orf84H3BNL1 204 aa9.43□□□□□ -0.9
ACTN1-211ENST00000553882 Q8N9L7 120 aa9.43□□□□□ -0.9
ACTN1-211ENST00000553882 Q8N377 158 aa9.43□□□□□ -0.9
ACTN1-211ENST00000553882 HUWE1Q7Z6Z7 4374 aaKnown RBP9.43□□□□□ -0.9
ACTN1-211ENST00000553882 DNAH1Q9P2D7 4330 aa9.42□□□□□ -0.9
ACTN1-211ENST00000553882 J3KT08 172 aa9.42□□□□□ -0.9
ACTN1-211ENST00000553882 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
ACTN1-211ENST00000553882 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
ACTN1-211ENST00000553882 DNAH10Q8IVF4 4471 aa9.41□□□□□ -0.9
ACTN1-211ENST00000553882 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
ACTN1-211ENST00000553882 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
ACTN1-211ENST00000553882 Q9BRP9 147 aa9.4□□□□□ -0.9
ACTN1-211ENST00000553882 Q6ZRX8 168 aa9.4□□□□□ -0.9
ACTN1-211ENST00000553882 DPH3Q96FX2 82 aa9.39□□□□□ -0.91
ACTN1-211ENST00000553882 TRAV7A0A075B6U4 112 aa9.39□□□□□ -0.91
ACTN1-211ENST00000553882 TENM2Q9NT68 2774 aa9.39□□□□□ -0.91
ACTN1-211ENST00000553882 IGLV1-50A0A075B6I6 118 aa9.38□□□□□ -0.91
ACTN1-211ENST00000553882 ETDCA0A1B0GVM5 59 aa9.38□□□□□ -0.91
ACTN1-211ENST00000553882 ST20-AS1Q8NBB2 130 aa9.38□□□□□ -0.91
ACTN1-211ENST00000553882 NREPQ16612 68 aa9.37□□□□□ -0.91
ACTN1-211ENST00000553882 SNURFQ9Y675 71 aa9.37□□□□□ -0.91
ACTN1-211ENST00000553882 C4orf26Q17RF5 130 aa9.37□□□□□ -0.91
ACTN1-211ENST00000553882 TM2D3Q9BRN9 247 aa9.37□□□□□ -0.91
ACTN1-211ENST00000553882 KRTAP4-16G5E9R7 235 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-211ENST00000553882 K7EIL1 84 aa9.36□□□□□ -0.91
ACTN1-211ENST00000553882 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
ACTN1-211ENST00000553882 PLA2G2DQ9UNK4 145 aa9.35□□□□□ -0.91
ACTN1-211ENST00000553882 PKIGQ9Y2B9 76 aa9.35□□□□□ -0.91
ACTN1-211ENST00000553882 BPY2O14599 106 aa9.35□□□□□ -0.91
ACTN1-211ENST00000553882 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
ACTN1-211ENST00000553882 ERC2-IT1O76042 136 aa9.35□□□□□ -0.91
ACTN1-211ENST00000553882 PRO0628Q9UI54 55 aa9.35□□□□□ -0.91
ACTN1-211ENST00000553882 IGLV5-48A0A075B6I7 105 aa9.34□□□□□ -0.91
ACTN1-211ENST00000553882 PRYO14603 147 aa9.34□□□□□ -0.91
ACTN1-211ENST00000553882 OXTP01178 125 aa9.34□□□□□ -0.91
ACTN1-211ENST00000553882 RMI2Q96E14 147 aa9.34□□□□□ -0.91
ACTN1-211ENST00000553882 SPRR1AP35321 89 aa9.33□□□□□ -0.92
ACTN1-211ENST00000553882 BCE1O60756 84 aa9.33□□□□□ -0.92
ACTN1-211ENST00000553882 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
ACTN1-211ENST00000553882 UBE2BP63146 152 aa9.33□□□□□ -0.92
ACTN1-211ENST00000553882 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
ACTN1-211ENST00000553882 H7BZZ5 65 aa9.32□□□□□ -0.92
ACTN1-211ENST00000553882 IGKV4-1P06312 121 aa9.32□□□□□ -0.92
ACTN1-211ENST00000553882 SRRM2Q9UQ35 2752 aaKnown RBP9.31□□□□□ -0.92
ACTN1-211ENST00000553882 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
ACTN1-211ENST00000553882 IGKV2-24A0A0C4DH68 120 aa9.31□□□□□ -0.92
ACTN1-211ENST00000553882 A0A1W2PNM2 257 aa9.31□□□□□ -0.92
ACTN1-211ENST00000553882 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
ACTN1-211ENST00000553882 KRTAP1-5Q9BYS1 174 aa9.31□□□□□ -0.92
ACTN1-211ENST00000553882 DNAH9Q9NYC9 4486 aa9.3□□□□□ -0.92
ACTN1-211ENST00000553882 LINC00336Q6ZUF6 198 aa9.3□□□□□ -0.92
ACTN1-211ENST00000553882 KLKP1Q107X0 134 aa9.29□□□□□ -0.92
ACTN1-211ENST00000553882 FAM236DA0A1B0GTK5 79 aa9.28□□□□□ -0.92
ACTN1-211ENST00000553882 FAM236CP0DP71 79 aa9.28□□□□□ -0.92
ACTN1-211ENST00000553882 TNP2Q05952 138 aa9.28□□□□□ -0.92
ACTN1-211ENST00000553882 DNAH7Q8WXX0 4024 aa9.27□□□□□ -0.92
ACTN1-211ENST00000553882 REG3GQ6UW15 175 aa9.27□□□□□ -0.93
ACTN1-211ENST00000553882 A0A096LNI7 61 aa9.27□□□□□ -0.93
ACTN1-211ENST00000553882 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
ACTN1-211ENST00000553882 A0A1W2PNN7 141 aa9.27□□□□□ -0.93
ACTN1-211ENST00000553882 F8WEM9 126 aa9.26□□□□□ -0.93
ACTN1-211ENST00000553882 HRCT1Q6UXD1 115 aa9.26□□□□□ -0.93
ACTN1-211ENST00000553882 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-211ENST00000553882 PSCAO43653 123 aa9.25□□□□□ -0.93
ACTN1-211ENST00000553882 PRLHP81277 87 aa9.25□□□□□ -0.93
ACTN1-211ENST00000553882 Q8NBF4 154 aa9.24□□□□□ -0.93
ACTN1-211ENST00000553882 C1orf195Q5TG92 126 aa9.24□□□□□ -0.93
ACTN1-211ENST00000553882 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
ACTN1-211ENST00000553882 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.93
ACTN1-211ENST00000553882 SMIM29Q86T20 159 aa9.21□□□□□ -0.94
ACTN1-211ENST00000553882 HIGD2AQ9BW72 106 aa9.21□□□□□ -0.94
ACTN1-211ENST00000553882 OCR1Q9BZK8 76 aa9.21□□□□□ -0.94
ACTN1-211ENST00000553882 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
ACTN1-211ENST00000553882 CHTF8P0CG12 524 aa9.2□□□□□ -0.94
ACTN1-211ENST00000553882 LINC00476Q8WZB0 136 aa9.2□□□□□ -0.94
ACTN1-211ENST00000553882 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
ACTN1-211ENST00000553882 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms