RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
HDAC7-228ENST00000548938 APOC4P55056 127 aa9.08□□□□□ -0.96
HDAC7-228ENST00000548938 TMEM254Q8TBM7 123 aa9.08□□□□□ -0.96
HDAC7-228ENST00000548938 NDUFC1O43677 76 aa9.08□□□□□ -0.96
HDAC7-228ENST00000548938 SMIM26A0A096LP01 95 aa9.07□□□□□ -0.96
HDAC7-228ENST00000548938 SPART-AS1P0CW21 52 aa9.07□□□□□ -0.96
HDAC7-228ENST00000548938 M0R378 163 aa9.07□□□□□ -0.96
HDAC7-228ENST00000548938 IGKV4-1P06312 121 aa9.07□□□□□ -0.96
HDAC7-228ENST00000548938 Q6ZRU5 148 aa9.07□□□□□ -0.96
HDAC7-228ENST00000548938 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
HDAC7-228ENST00000548938 FBN1P35555 2871 aaKnown RBP9.06□□□□□ -0.96
HDAC7-228ENST00000548938 STAB1Q9NY15 2570 aa9.06□□□□□ -0.96
HDAC7-228ENST00000548938 KRTAP24-1Q3LI83 254 aa9.06□□□□□ -0.96
HDAC7-228ENST00000548938 EGFEM1PQ0D2K5 195 aa9.05□□□□□ -0.96
HDAC7-228ENST00000548938 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
HDAC7-228ENST00000548938 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
HDAC7-228ENST00000548938 C3orf84H3BNL1 204 aa9.04□□□□□ -0.96
HDAC7-228ENST00000548938 KRTAP26-1Q6PEX3 210 aa9.03□□□□□ -0.96
HDAC7-228ENST00000548938 ATP5EP56381 51 aaPredicted RBP9.03□□□□□ -0.96
HDAC7-228ENST00000548938 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
HDAC7-228ENST00000548938 MAST4O15021 2626 aa9.02□□□□□ -0.97
HDAC7-228ENST00000548938 OCR1Q9BZK8 76 aa9.02□□□□□ -0.97
HDAC7-228ENST00000548938 ERC2-IT1O76042 136 aa9.02□□□□□ -0.97
HDAC7-228ENST00000548938 Q6ZRP5 223 aa9.01□□□□□ -0.97
HDAC7-228ENST00000548938 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
HDAC7-228ENST00000548938 PKD1L1Q8TDX9 2849 aa9□□□□□ -0.97
HDAC7-228ENST00000548938 A0A0U1RQV1 116 aa9□□□□□ -0.97
HDAC7-228ENST00000548938 PRYO14603 147 aa8.99□□□□□ -0.97
HDAC7-228ENST00000548938 FAM229BQ4G0N7 80 aa8.99□□□□□ -0.97
HDAC7-228ENST00000548938 COL6A5A8TX70 2615 aa8.98□□□□□ -0.97
HDAC7-228ENST00000548938 OXLD1Q5BKU9 147 aa8.97□□□□□ -0.97
HDAC7-228ENST00000548938 Q8N377 158 aa8.97□□□□□ -0.97
HDAC7-228ENST00000548938 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.97
HDAC7-228ENST00000548938 KPRPQ5T749 579 aaPredicted RBP8.96□□□□□ -0.98
HDAC7-228ENST00000548938 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
HDAC7-228ENST00000548938 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC7-228ENST00000548938 C7orf33Q8WU49 177 aa8.94□□□□□ -0.98
HDAC7-228ENST00000548938 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
HDAC7-228ENST00000548938 SMIM29Q86T20 159 aa8.94□□□□□ -0.98
HDAC7-228ENST00000548938 NKAPP1Q8N9T2 125 aa8.94□□□□□ -0.98
HDAC7-228ENST00000548938 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
HDAC7-228ENST00000548938 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
HDAC7-228ENST00000548938 KRTAP10-11P60412 298 aa8.93□□□□□ -0.98
HDAC7-228ENST00000548938 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
HDAC7-228ENST00000548938 IGKV2D-24A0A075B6R9 120 aa8.92□□□□□ -0.98
HDAC7-228ENST00000548938 SYCNQ0VAF6 134 aa8.92□□□□□ -0.98
HDAC7-228ENST00000548938 Q6ZTC4 211 aa8.92□□□□□ -0.98
HDAC7-228ENST00000548938 RETNQ9HD89 108 aa8.92□□□□□ -0.98
HDAC7-228ENST00000548938 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
HDAC7-228ENST00000548938 ESRGQ1W209 222 aa8.9□□□□□ -0.98
HDAC7-228ENST00000548938 CMYA5Q8N3K9 4069 aa8.9□□□□□ -0.98
HDAC7-228ENST00000548938 BRK1Q8WUW1 75 aa8.9□□□□□ -0.98
HDAC7-228ENST00000548938 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
HDAC7-228ENST00000548938 Q9BRP9 147 aa8.89□□□□□ -0.99
HDAC7-228ENST00000548938 NOTCH1P46531 2555 aa8.89□□□□□ -0.99
HDAC7-228ENST00000548938 ANK2Q01484 3957 aa8.88□□□□□ -0.99
HDAC7-228ENST00000548938 Q6ZRX8 168 aa8.88□□□□□ -0.99
HDAC7-228ENST00000548938 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
HDAC7-228ENST00000548938 H3BNG1 76 aa8.88□□□□□ -0.99
HDAC7-228ENST00000548938 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
HDAC7-228ENST00000548938 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
HDAC7-228ENST00000548938 TNP2Q05952 138 aa8.87□□□□□ -0.99
HDAC7-228ENST00000548938 DHRS4-AS1Q9P1J3 65 aa8.86□□□□□ -0.99
HDAC7-228ENST00000548938 TENM3Q9P273 2699 aa8.86□□□□□ -0.99
HDAC7-228ENST00000548938 KRTAP4-16G5E9R7 235 aaPredicted RBP8.85□□□□□ -0.99
HDAC7-228ENST00000548938 Q8NBF4 154 aa8.85□□□□□ -0.99
HDAC7-228ENST00000548938 LCE6AA0A183 80 aa8.84□□□□□ -0.99
HDAC7-228ENST00000548938 LINC01556Q5JQF7 62 aa8.84□□□□□ -0.99
HDAC7-228ENST00000548938 DSCR10P59022 87 aa8.84□□□□□ -0.99
HDAC7-228ENST00000548938 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
HDAC7-228ENST00000548938 K7EQZ3 153 aa8.83□□□□□ -1
HDAC7-228ENST00000548938 NBEAL1Q6ZS30 2694 aa8.83□□□□□ -1
HDAC7-228ENST00000548938 A0A1B0GW54 56 aa8.82□□□□□ -1
HDAC7-228ENST00000548938 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
HDAC7-228ENST00000548938 SPRR1AP35321 89 aa8.81□□□□□ -1
HDAC7-228ENST00000548938 SPRR4Q96PI1 79 aa8.81□□□□□ -1
HDAC7-228ENST00000548938 hDV103S1A0JD37 113 aa8.81□□□□□ -1
HDAC7-228ENST00000548938 KRTAP7-1Q8IUC3 87 aa8.81□□□□□ -1
HDAC7-228ENST00000548938 DNAH3Q8TD57 4116 aa8.8□□□□□ -1
HDAC7-228ENST00000548938 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
HDAC7-228ENST00000548938 TLX1NBP0CAT3 122 aa8.8□□□□□ -1
HDAC7-228ENST00000548938 ZCCHC13Q8WW36 166 aaKnown RBP8.8□□□□□ -1
HDAC7-228ENST00000548938 PLA2G2DQ9UNK4 145 aa8.8□□□□□ -1
HDAC7-228ENST00000548938 PMAIP1Q13794 54 aa8.79□□□□□ -1
HDAC7-228ENST00000548938 MGAM2Q2M2H8 2515 aa8.79□□□□□ -1
HDAC7-228ENST00000548938 CASC10Q5T4H9 136 aa8.79□□□□□ -1
HDAC7-228ENST00000548938 A0A0G2JQZ4 141 aa8.78□□□□□ -1
HDAC7-228ENST00000548938 A0A1W2PNN7 141 aa8.78□□□□□ -1
HDAC7-228ENST00000548938 C1orf64Q8NEQ6 169 aa8.78□□□□□ -1
HDAC7-228ENST00000548938 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
HDAC7-228ENST00000548938 UBE2BP63146 152 aa8.77□□□□□ -1.01
HDAC7-228ENST00000548938 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.77□□□□□ -1.01
HDAC7-228ENST00000548938 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
HDAC7-228ENST00000548938 PRB2P02812 416 aaPredicted RBP8.75□□□□□ -1.01
HDAC7-228ENST00000548938 PRR4Q16378 134 aa8.75□□□□□ -1.01
HDAC7-228ENST00000548938 HCG22E2RYF7 251 aa8.74□□□□□ -1.01
HDAC7-228ENST00000548938 DNAH10OSP0CZ25 163 aa8.74□□□□□ -1.01
HDAC7-228ENST00000548938 MRPL55Q7Z7F7 128 aaKnown RBP8.74□□□□□ -1.01
HDAC7-228ENST00000548938 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
HDAC7-228ENST00000548938 PSCAO43653 123 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms