RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 REG3GQ6UW15 175 aa17.89■□□□□ 0.45
BRF1-213ENST00000548421 DIRC1Q969H9 104 aa17.88■□□□□ 0.45
BRF1-213ENST00000548421 C6orf99Q4VX62 202 aa17.87■□□□□ 0.45
BRF1-213ENST00000548421 SPRR1AP35321 89 aa17.86■□□□□ 0.45
BRF1-213ENST00000548421 PSMB2P49721 201 aa17.86■□□□□ 0.45
BRF1-213ENST00000548421 C9orf118A6NHY6 69 aa17.84■□□□□ 0.45
BRF1-213ENST00000548421 TRIAP1O43715 76 aa17.84■□□□□ 0.45
BRF1-213ENST00000548421 NAA38Q9BRA0 125 aaKnown RBP17.83■□□□□ 0.45
BRF1-213ENST00000548421 CDK2AP2O75956 126 aa17.82■□□□□ 0.44
BRF1-213ENST00000548421 PSORS1C2Q9UIG4 136 aa17.82■□□□□ 0.44
BRF1-213ENST00000548421 KRTAP4-16G5E9R7 235 aaPredicted RBP17.81■□□□□ 0.44
BRF1-213ENST00000548421 H3BUT2 72 aa17.81■□□□□ 0.44
BRF1-213ENST00000548421 TRBV7-6A0A0J9YX20 115 aa17.79■□□□□ 0.44
BRF1-213ENST00000548421 ETDCA0A1B0GVM5 59 aa17.79■□□□□ 0.44
BRF1-213ENST00000548421 VAMP3Q15836 100 aa17.79■□□□□ 0.44
BRF1-213ENST00000548421 COX6CP09669 75 aa17.78■□□□□ 0.44
BRF1-213ENST00000548421 BCE1O60756 84 aa17.77■□□□□ 0.44
BRF1-213ENST00000548421 COX7BP24311 80 aa17.76■□□□□ 0.43
BRF1-213ENST00000548421 ELOF1P60002 83 aaKnown RBP17.75■□□□□ 0.43
BRF1-213ENST00000548421 C1orf137Q5JT78 98 aa17.75■□□□□ 0.43
BRF1-213ENST00000548421 SCGB1C2P0DMR2 95 aa17.75■□□□□ 0.43
BRF1-213ENST00000548421 FAM19A1Q7Z5A9 133 aa17.75■□□□□ 0.43
BRF1-213ENST00000548421 B5MCH6 92 aa17.74■□□□□ 0.43
BRF1-213ENST00000548421 H0YGX0 51 aa17.73■□□□□ 0.43
BRF1-213ENST00000548421 SMR3BP02814 79 aaPredicted RBP17.73■□□□□ 0.43
BRF1-213ENST00000548421 Q6ZRX8 168 aa17.72■□□□□ 0.43
BRF1-213ENST00000548421 LINC00528Q8N1L1 170 aa17.72■□□□□ 0.43
BRF1-213ENST00000548421 A0A1W2PPM0 123 aa17.71■□□□□ 0.43
BRF1-213ENST00000548421 LYRM7Q5U5X0 104 aa17.71■□□□□ 0.43
BRF1-213ENST00000548421 VPS13BQ7Z7G8 4022 aa17.71■□□□□ 0.43
BRF1-213ENST00000548421 HSPG2P98160 4391 aa17.7■□□□□ 0.42
BRF1-213ENST00000548421 UBE2AP49459 152 aa17.69■□□□□ 0.42
BRF1-213ENST00000548421 PRLHP81277 87 aa17.69■□□□□ 0.42
BRF1-213ENST00000548421 H0Y9J4 135 aa17.68■□□□□ 0.42
BRF1-213ENST00000548421 FABP2P12104 132 aa17.68■□□□□ 0.42
BRF1-213ENST00000548421 CLEC2BQ92478 149 aa17.66■□□□□ 0.42
BRF1-213ENST00000548421 RYR1P21817 5038 aa17.66■□□□□ 0.42
BRF1-213ENST00000548421 RPL37AP61513 92 aaKnown RBP17.65■□□□□ 0.42
BRF1-213ENST00000548421 KRTAP13-1Q8IUC0 172 aa17.65■□□□□ 0.42
BRF1-213ENST00000548421 LINC00575Q6W349 94 aa17.64■□□□□ 0.41
BRF1-213ENST00000548421 IGLV7-43P04211 117 aa17.63■□□□□ 0.41
BRF1-213ENST00000548421 FAM218AQ96MZ4 157 aa17.63■□□□□ 0.41
BRF1-213ENST00000548421 Q9BRP9 147 aa17.63■□□□□ 0.41
BRF1-213ENST00000548421 FAT1Q14517 4588 aa17.63■□□□□ 0.41
BRF1-213ENST00000548421 DHRS4-AS1Q9P1J3 65 aa17.63■□□□□ 0.41
BRF1-213ENST00000548421 SLC25A20O43772 301 aa17.62■□□□□ 0.41
BRF1-213ENST00000548421 INAFM2P0DMQ5 153 aa17.62■□□□□ 0.41
BRF1-213ENST00000548421 TRBV20-1A0A075B6N2 111 aa17.59■□□□□ 0.41
BRF1-213ENST00000548421 ZNF861PO60384 105 aa17.59■□□□□ 0.41
BRF1-213ENST00000548421 TCL1BO95988 128 aa17.59■□□□□ 0.41
BRF1-213ENST00000548421 SMCR5Q8TEV8 140 aa17.59■□□□□ 0.41
BRF1-213ENST00000548421 HIGD2AQ9BW72 106 aa17.59■□□□□ 0.41
BRF1-213ENST00000548421 hADV29S1A0JD25 119 aa17.58■□□□□ 0.41
BRF1-213ENST00000548421 LST1O00453 97 aa17.58■□□□□ 0.41
BRF1-213ENST00000548421 KIAA1109Q2LD37 5005 aa17.58■□□□□ 0.4
BRF1-213ENST00000548421 A0A1B0GX51 115 aa17.57■□□□□ 0.4
BRF1-213ENST00000548421 SNCGO76070 127 aa17.57■□□□□ 0.4
BRF1-213ENST00000548421 ATXN8Q156A1 80 aa17.56■□□□□ 0.4
BRF1-213ENST00000548421 SPCS1Q9Y6A9 102 aa17.56■□□□□ 0.4
BRF1-213ENST00000548421 FAM229AH3BQW9 127 aa17.55■□□□□ 0.4
BRF1-213ENST00000548421 TRACP01848 142 aa17.52■□□□□ 0.4
BRF1-213ENST00000548421 ERC2-IT1O76042 136 aa17.51■□□□□ 0.39
BRF1-213ENST00000548421 PLA2G1BP04054 148 aaKnown RBP17.5■□□□□ 0.39
BRF1-213ENST00000548421 SRRM2Q9UQ35 2752 aaKnown RBP17.5■□□□□ 0.39
BRF1-213ENST00000548421 DNAL4O96015 105 aa17.5■□□□□ 0.39
BRF1-213ENST00000548421 KRTAP10-4P60372 401 aaPredicted RBP17.5■□□□□ 0.39
BRF1-213ENST00000548421 K7EP34 96 aa17.49■□□□□ 0.39
BRF1-213ENST00000548421 Q5VSD8 79 aa17.47■□□□□ 0.39
BRF1-213ENST00000548421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.46■□□□□ 0.39
BRF1-213ENST00000548421 Q6ZQY7 126 aa17.46■□□□□ 0.39
BRF1-213ENST00000548421 A0A1B0GV90 55 aa17.45■□□□□ 0.38
BRF1-213ENST00000548421 H3BMG7 143 aa17.44■□□□□ 0.38
BRF1-213ENST00000548421 GTF2H5Q6ZYL4 71 aa17.44■□□□□ 0.38
BRF1-213ENST00000548421 Q8N1X5 172 aa17.43■□□□□ 0.38
BRF1-213ENST00000548421 HERC2O95714 4834 aa17.42■□□□□ 0.38
BRF1-213ENST00000548421 ST20-AS1Q8NBB2 130 aa17.42■□□□□ 0.38
BRF1-213ENST00000548421 SPINK6Q6UWN8 80 aa17.4■□□□□ 0.38
BRF1-213ENST00000548421 OCIAD2Q56VL3 154 aa17.39■□□□□ 0.37
BRF1-213ENST00000548421 ORMDL1Q9P0S3 153 aa17.38■□□□□ 0.37
BRF1-213ENST00000548421 ZNF706Q9Y5V0 76 aaPredicted RBP17.38■□□□□ 0.37
BRF1-213ENST00000548421 KRTAP17-1Q9BYP8 105 aa17.37■□□□□ 0.37
BRF1-213ENST00000548421 IGLV5-48A0A075B6I7 105 aa17.36■□□□□ 0.37
BRF1-213ENST00000548421 C9JAW5 83 aa17.36■□□□□ 0.37
BRF1-213ENST00000548421 DEFB105AQ8NG35 78 aa17.36■□□□□ 0.37
BRF1-213ENST00000548421 GHRHP01286 108 aa17.35■□□□□ 0.37
BRF1-213ENST00000548421 SPRR4Q96PI1 79 aa17.35■□□□□ 0.37
BRF1-213ENST00000548421 LINC01547P58512 204 aaPredicted RBP17.34■□□□□ 0.37
BRF1-213ENST00000548421 PKHD1L1Q86WI1 4243 aa17.32■□□□□ 0.36
BRF1-213ENST00000548421 GAGE2AQ6NT46 116 aa17.31■□□□□ 0.36
BRF1-213ENST00000548421 TEX49A0A1B0GTD5 131 aa17.31■□□□□ 0.36
BRF1-213ENST00000548421 H3BQ85 93 aa17.31■□□□□ 0.36
BRF1-213ENST00000548421 PPDPFLQ8WWR9 84 aa17.31■□□□□ 0.36
BRF1-213ENST00000548421 Q8N377 158 aa17.3■□□□□ 0.36
BRF1-213ENST00000548421 BAALC-AS2P0C853 105 aa17.29■□□□□ 0.36
BRF1-213ENST00000548421 MTURNQ8N3F0 131 aa17.29■□□□□ 0.36
BRF1-213ENST00000548421 TMEM256-PLSCR3K7ERE1 68 aa17.28■□□□□ 0.36
BRF1-213ENST00000548421 SPRR1BP22528 89 aa17.27■□□□□ 0.36
BRF1-213ENST00000548421 UBE2V1Q13404 147 aa17.27■□□□□ 0.36
BRF1-213ENST00000548421 LINC00483Q53H64 154 aa17.26■□□□□ 0.35
BRF1-213ENST00000548421 H3BT86 120 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms