RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
GATC-202ENST00000548171 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
GATC-202ENST00000548171 CBY1Q9Y3M2 126 aa10.82□□□□□ -0.68
GATC-202ENST00000548171 SPRR1BP22528 89 aa10.81□□□□□ -0.68
GATC-202ENST00000548171 NMUP48645 174 aa10.81□□□□□ -0.68
GATC-202ENST00000548171 HINT1P49773 126 aaPredicted RBP10.81□□□□□ -0.68
GATC-202ENST00000548171 J3QQQ9 107 aa10.8□□□□□ -0.68
GATC-202ENST00000548171 HRCT1Q6UXD1 115 aa10.79□□□□□ -0.68
GATC-202ENST00000548171 M0R2T5 61 aa10.78□□□□□ -0.68
GATC-202ENST00000548171 HSBP1O75506 76 aa10.78□□□□□ -0.68
GATC-202ENST00000548171 PLNP26678 52 aa10.78□□□□□ -0.68
GATC-202ENST00000548171 H0Y8G0 127 aa10.77□□□□□ -0.69
GATC-202ENST00000548171 LAMTOR3Q9UHA4 124 aa10.77□□□□□ -0.69
GATC-202ENST00000548171 LGALS3P17931 250 aaKnown RBP10.76□□□□□ -0.69
GATC-202ENST00000548171 HERVK_113P61574 105 aa10.76□□□□□ -0.69
GATC-202ENST00000548171 CD164Q04900 197 aa10.76□□□□□ -0.69
GATC-202ENST00000548171 DHRS4-AS1Q9P1J3 65 aa10.75□□□□□ -0.69
GATC-202ENST00000548171 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
GATC-202ENST00000548171 COX6B2Q6YFQ2 88 aa10.72□□□□□ -0.69
GATC-202ENST00000548171 DPM2O94777 84 aa10.71□□□□□ -0.69
GATC-202ENST00000548171 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
GATC-202ENST00000548171 EIF4EBP3O60516 100 aaPredicted RBP10.7□□□□□ -0.7
GATC-202ENST00000548171 SNAPINO95295 136 aa10.7□□□□□ -0.7
GATC-202ENST00000548171 NPC2P61916 151 aa10.7□□□□□ -0.7
GATC-202ENST00000548171 Q5XG85 94 aa10.7□□□□□ -0.7
GATC-202ENST00000548171 APOC3P02656 99 aa10.69□□□□□ -0.7
GATC-202ENST00000548171 ADAMTSL4-AS1Q5T5F5 129 aa10.69□□□□□ -0.7
GATC-202ENST00000548171 PRO1933Q9H354 126 aa10.69□□□□□ -0.7
GATC-202ENST00000548171 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
GATC-202ENST00000548171 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
GATC-202ENST00000548171 H7C2G1 150 aa10.67□□□□□ -0.7
GATC-202ENST00000548171 IGKCP01834 107 aa10.67□□□□□ -0.7
GATC-202ENST00000548171 SVBPQ8N300 66 aa10.67□□□□□ -0.7
GATC-202ENST00000548171 OR13C6PQ8NH95 151 aa10.67□□□□□ -0.7
GATC-202ENST00000548171 SPANXCQ9NY87 97 aa10.67□□□□□ -0.7
GATC-202ENST00000548171 NDUFA5Q16718 116 aa10.66□□□□□ -0.7
GATC-202ENST00000548171 YPEL4Q96NS1 127 aa10.66□□□□□ -0.7
GATC-202ENST00000548171 HSPB8Q9UJY1 196 aa10.65□□□□□ -0.7
GATC-202ENST00000548171 TAL2Q16559 108 aa10.64□□□□□ -0.71
GATC-202ENST00000548171 Q1RN00 199 aa10.64□□□□□ -0.71
GATC-202ENST00000548171 C1orf195Q5TG92 126 aa10.64□□□□□ -0.71
GATC-202ENST00000548171 ELOF1P60002 83 aaKnown RBP10.63□□□□□ -0.71
GATC-202ENST00000548171 SPANXDQ9BXN6 97 aa10.63□□□□□ -0.71
GATC-202ENST00000548171 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
GATC-202ENST00000548171 AKR1D1P51857 326 aa10.62□□□□□ -0.71
GATC-202ENST00000548171 PMCHL2Q9BQD1 86 aa10.62□□□□□ -0.71
GATC-202ENST00000548171 COX7BP24311 80 aa10.61□□□□□ -0.71
GATC-202ENST00000548171 LINC00308Q8TCZ7 52 aa10.61□□□□□ -0.71
GATC-202ENST00000548171 E9PLD3 99 aa10.6□□□□□ -0.71
GATC-202ENST00000548171 SERF1AO75920 110 aa10.6□□□□□ -0.71
GATC-202ENST00000548171 DEFB105AQ8NG35 78 aa10.6□□□□□ -0.71
GATC-202ENST00000548171 FABP4P15090 132 aa10.58□□□□□ -0.72
GATC-202ENST00000548171 LINC00310P59036 64 aa10.58□□□□□ -0.72
GATC-202ENST00000548171 C6orf99Q4VX62 202 aa10.58□□□□□ -0.72
GATC-202ENST00000548171 TIMM17BO60830 172 aa10.57□□□□□ -0.72
GATC-202ENST00000548171 SMIM29Q86T20 159 aa10.57□□□□□ -0.72
GATC-202ENST00000548171 LITAFQ99732 161 aa10.57□□□□□ -0.72
GATC-202ENST00000548171 LINC00518Q8N0U6 118 aa10.56□□□□□ -0.72
GATC-202ENST00000548171 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
GATC-202ENST00000548171 TRGC2P03986 189 aa10.54□□□□□ -0.72
GATC-202ENST00000548171 FLGP20930 4061 aaPredicted RBP10.53□□□□□ -0.72
GATC-202ENST00000548171 IGLV5-48A0A075B6I7 105 aa10.52□□□□□ -0.73
GATC-202ENST00000548171 TCL1BO95988 128 aa10.52□□□□□ -0.73
GATC-202ENST00000548171 KRTAP9-7A8MTY7 169 aa10.51□□□□□ -0.73
GATC-202ENST00000548171 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.5□□□□□ -0.73
GATC-202ENST00000548171 A0A1B0GWB2 263 aa10.49□□□□□ -0.73
GATC-202ENST00000548171 A0A0G2JQZ4 141 aa10.48□□□□□ -0.73
GATC-202ENST00000548171 ZNF815PA8K554 130 aa10.45□□□□□ -0.74
GATC-202ENST00000548171 Q6Q795 121 aa10.45□□□□□ -0.74
GATC-202ENST00000548171 CFC1P0CG37 223 aa10.44□□□□□ -0.74
GATC-202ENST00000548171 A4D1N5 150 aa10.43□□□□□ -0.74
GATC-202ENST00000548171 ATP11AUNQ6ZP68 121 aa10.43□□□□□ -0.74
GATC-202ENST00000548171 SYS1-DBNDD2H3BUS1 97 aa10.42□□□□□ -0.74
GATC-202ENST00000548171 COPS9Q8WXC6 57 aa10.41□□□□□ -0.74
GATC-202ENST00000548171 NHP2Q9NX24 153 aaKnown RBP10.41□□□□□ -0.74
GATC-202ENST00000548171 Q75L30 129 aa10.39□□□□□ -0.75
GATC-202ENST00000548171 A6NDN8 102 aa10.38□□□□□ -0.75
GATC-202ENST00000548171 F8WEM9 126 aa10.37□□□□□ -0.75
GATC-202ENST00000548171 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
GATC-202ENST00000548171 TTTY13Q9BZ97 58 aa10.37□□□□□ -0.75
GATC-202ENST00000548171 LINC01545Q5VT33 79 aa10.36□□□□□ -0.75
GATC-202ENST00000548171 IFITM1P13164 125 aa10.34□□□□□ -0.75
GATC-202ENST00000548171 PET117Q6UWS5 81 aa10.34□□□□□ -0.75
GATC-202ENST00000548171 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
GATC-202ENST00000548171 OBSCN-AS1Q96MR7 158 aa10.34□□□□□ -0.75
GATC-202ENST00000548171 Q6JHZ5 121 aa10.33□□□□□ -0.76
GATC-202ENST00000548171 KRTAP9-8Q9BYQ0 159 aa10.33□□□□□ -0.76
GATC-202ENST00000548171 TRBV7-7A0A0K0K1E9 115 aa10.31□□□□□ -0.76
GATC-202ENST00000548171 Q6ZVH6 145 aa10.31□□□□□ -0.76
GATC-202ENST00000548171 C20orf202A1L168 122 aa10.3□□□□□ -0.76
GATC-202ENST00000548171 CLEC2BQ92478 149 aa10.29□□□□□ -0.76
GATC-202ENST00000548171 TRAV13-2A0A0B4J235 113 aa10.28□□□□□ -0.76
GATC-202ENST00000548171 COLCA2A8K830 154 aa10.28□□□□□ -0.76
GATC-202ENST00000548171 SMIM11BQ8TCY0 68 aa10.28□□□□□ -0.76
GATC-202ENST00000548171 SSPOA2VEC9 5147 aa10.28□□□□□ -0.76
GATC-202ENST00000548171 USH2AO75445 5202 aa10.27□□□□□ -0.77
GATC-202ENST00000548171 VAMP3Q15836 100 aa10.26□□□□□ -0.77
GATC-202ENST00000548171 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
GATC-202ENST00000548171 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
GATC-202ENST00000548171 TRBV20-1A0A075B6N2 111 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms