RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 PMCHL2Q9BQD1 86 aa10.42□□□□□ -0.74
CHERP-204ENST00000546538 MAP1LC3CQ9BXW4 147 aa10.42□□□□□ -0.74
CHERP-204ENST00000546538 LEPROTL1O95214 131 aa10.41□□□□□ -0.74
CHERP-204ENST00000546538 SOSTDC1Q6X4U4 206 aa10.41□□□□□ -0.74
CHERP-204ENST00000546538 J3QQQ9 107 aa10.41□□□□□ -0.74
CHERP-204ENST00000546538 IGLV6-57P01721 117 aa10.41□□□□□ -0.74
CHERP-204ENST00000546538 FABP4P15090 132 aa10.4□□□□□ -0.75
CHERP-204ENST00000546538 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.75
CHERP-204ENST00000546538 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
CHERP-204ENST00000546538 PLNP26678 52 aa10.38□□□□□ -0.75
CHERP-204ENST00000546538 RPS29P62273 56 aaKnown RBP10.38□□□□□ -0.75
CHERP-204ENST00000546538 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
CHERP-204ENST00000546538 HSPB8Q9UJY1 196 aa10.38□□□□□ -0.75
CHERP-204ENST00000546538 SSBP3-AS1Q7Z2R9 100 aa10.37□□□□□ -0.75
CHERP-204ENST00000546538 KRTAP9-6A0A140TA67 174 aa10.36□□□□□ -0.75
CHERP-204ENST00000546538 DPM2O94777 84 aa10.36□□□□□ -0.75
CHERP-204ENST00000546538 NDUFC2O95298 119 aa10.36□□□□□ -0.75
CHERP-204ENST00000546538 LOC105371267A0A1B0GV96 52 aa10.35□□□□□ -0.75
CHERP-204ENST00000546538 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
CHERP-204ENST00000546538 NMUP48645 174 aa10.34□□□□□ -0.75
CHERP-204ENST00000546538 AKR1D1P51857 326 aa10.34□□□□□ -0.75
CHERP-204ENST00000546538 NPC2P61916 151 aa10.34□□□□□ -0.75
CHERP-204ENST00000546538 S100A12P80511 92 aa10.34□□□□□ -0.75
CHERP-204ENST00000546538 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
CHERP-204ENST00000546538 IGKCP01834 107 aa10.33□□□□□ -0.76
CHERP-204ENST00000546538 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
CHERP-204ENST00000546538 LGALS3P17931 250 aaKnown RBP10.33□□□□□ -0.76
CHERP-204ENST00000546538 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
CHERP-204ENST00000546538 MIEN1Q9BRT3 115 aa10.32□□□□□ -0.76
CHERP-204ENST00000546538 SLC25A20O43772 301 aa10.31□□□□□ -0.76
CHERP-204ENST00000546538 ZNF73O43830 326 aaPredicted RBP10.31□□□□□ -0.76
CHERP-204ENST00000546538 KRTDAPP60985 99 aa10.31□□□□□ -0.76
CHERP-204ENST00000546538 HERVK_113P61574 105 aa10.31□□□□□ -0.76
CHERP-204ENST00000546538 XP32Q5T750 250 aa10.31□□□□□ -0.76
CHERP-204ENST00000546538 SEC61BP60468 96 aaKnown RBP10.3□□□□□ -0.76
CHERP-204ENST00000546538 LITAFQ99732 161 aa10.3□□□□□ -0.76
CHERP-204ENST00000546538 E9PLD3 99 aa10.28□□□□□ -0.76
CHERP-204ENST00000546538 C3orf79P0CE67 100 aa10.28□□□□□ -0.76
CHERP-204ENST00000546538 C20orf202A1L168 122 aa10.27□□□□□ -0.77
CHERP-204ENST00000546538 LCE2CQ5TA81 110 aa10.27□□□□□ -0.77
CHERP-204ENST00000546538 C9orf153Q5TBE3 101 aa10.27□□□□□ -0.77
CHERP-204ENST00000546538 SYS1-DBNDD2H3BUS1 97 aa10.26□□□□□ -0.77
CHERP-204ENST00000546538 JOSD1Q15040 202 aaPredicted RBP10.26□□□□□ -0.77
CHERP-204ENST00000546538 PET117Q6UWS5 81 aa10.26□□□□□ -0.77
CHERP-204ENST00000546538 LINC01547P58512 204 aaPredicted RBP10.24□□□□□ -0.77
CHERP-204ENST00000546538 KRTAP19-2Q3LHN2 52 aa10.24□□□□□ -0.77
CHERP-204ENST00000546538 SCGB1D1O95968 90 aa10.24□□□□□ -0.77
CHERP-204ENST00000546538 LINC00308Q8TCZ7 52 aa10.24□□□□□ -0.77
CHERP-204ENST00000546538 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
CHERP-204ENST00000546538 SPRR1BP22528 89 aa10.23□□□□□ -0.77
CHERP-204ENST00000546538 SPANXCQ9NY87 97 aa10.21□□□□□ -0.78
CHERP-204ENST00000546538 PYY3Q5JQD4 70 aa10.2□□□□□ -0.78
CHERP-204ENST00000546538 LINC01545Q5VT33 79 aa10.2□□□□□ -0.78
CHERP-204ENST00000546538 TTTY13Q9BZ97 58 aa10.2□□□□□ -0.78
CHERP-204ENST00000546538 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
CHERP-204ENST00000546538 HRCT1Q6UXD1 115 aa10.18□□□□□ -0.78
CHERP-204ENST00000546538 TIMM17BO60830 172 aa10.17□□□□□ -0.78
CHERP-204ENST00000546538 OR13C6PQ8NH95 151 aa10.16□□□□□ -0.78
CHERP-204ENST00000546538 FSIP2Q5CZC0 6907 aa10.15□□□□□ -0.78
CHERP-204ENST00000546538 ELOF1P60002 83 aaKnown RBP10.15□□□□□ -0.79
CHERP-204ENST00000546538 HINT1P49773 126 aaPredicted RBP10.14□□□□□ -0.79
CHERP-204ENST00000546538 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
CHERP-204ENST00000546538 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
CHERP-204ENST00000546538 ZNF815PA8K554 130 aa10.13□□□□□ -0.79
CHERP-204ENST00000546538 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
CHERP-204ENST00000546538 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
CHERP-204ENST00000546538 PCOTHQ58A44 107 aa10.13□□□□□ -0.79
CHERP-204ENST00000546538 ATOH7Q8N100 152 aa10.13□□□□□ -0.79
CHERP-204ENST00000546538 C12orf57Q99622 126 aa10.13□□□□□ -0.79
CHERP-204ENST00000546538 C9orf92A6NGG3 77 aa10.12□□□□□ -0.79
CHERP-204ENST00000546538 VAMP8Q9BV40 100 aa10.12□□□□□ -0.79
CHERP-204ENST00000546538 CBY1Q9Y3M2 126 aa10.12□□□□□ -0.79
CHERP-204ENST00000546538 LINC00518Q8N0U6 118 aa10.11□□□□□ -0.79
CHERP-204ENST00000546538 COX7BP24311 80 aa10.1□□□□□ -0.79
CHERP-204ENST00000546538 MT1HP80294 61 aa10.1□□□□□ -0.79
CHERP-204ENST00000546538 Q1RN00 199 aa10.1□□□□□ -0.79
CHERP-204ENST00000546538 SMIM29Q86T20 159 aa10.1□□□□□ -0.79
CHERP-204ENST00000546538 LIMD2Q9BT23 127 aa10.1□□□□□ -0.79
CHERP-204ENST00000546538 LAMTOR3Q9UHA4 124 aa10.09□□□□□ -0.79
CHERP-204ENST00000546538 A0A0G2JQZ4 141 aa10.07□□□□□ -0.8
CHERP-204ENST00000546538 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
CHERP-204ENST00000546538 DEFB105AQ8NG35 78 aa10.07□□□□□ -0.8
CHERP-204ENST00000546538 H7C2G1 150 aa10.07□□□□□ -0.8
CHERP-204ENST00000546538 PAM16Q9Y3D7 125 aa10.07□□□□□ -0.8
CHERP-204ENST00000546538 IGLV8-61A0A075B6I0 122 aa10.06□□□□□ -0.8
CHERP-204ENST00000546538 CD164Q04900 197 aa10.05□□□□□ -0.8
CHERP-204ENST00000546538 SPATA45Q537H7 98 aa10.05□□□□□ -0.8
CHERP-204ENST00000546538 TAL2Q16559 108 aa10.04□□□□□ -0.8
CHERP-204ENST00000546538 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
CHERP-204ENST00000546538 IGLV5-48A0A075B6I7 105 aa10.03□□□□□ -0.8
CHERP-204ENST00000546538 TEX49A0A1B0GTD5 131 aa10.03□□□□□ -0.8
CHERP-204ENST00000546538 PRO1933Q9H354 126 aa10.03□□□□□ -0.8
CHERP-204ENST00000546538 FLGP20930 4061 aaPredicted RBP10.02□□□□□ -0.81
CHERP-204ENST00000546538 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
CHERP-204ENST00000546538 C1orf195Q5TG92 126 aa10.02□□□□□ -0.81
CHERP-204ENST00000546538 Q5XG85 94 aa10.02□□□□□ -0.81
CHERP-204ENST00000546538 CRCT1Q9UGL9 99 aa10.02□□□□□ -0.81
CHERP-204ENST00000546538 TSTD3H0UI37 97 aa9.99□□□□□ -0.81
CHERP-204ENST00000546538 A0A1B0GWB2 263 aa9.98□□□□□ -0.81
CHERP-204ENST00000546538 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms